##gff-version 3
NA19317_chrY	CAT	gene	62929	64632	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;gene_id=NA19317_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff;ID=NA19317_ch_G0000001;Name=LOC124905300
NA19317_chrY	CAT	transcript	62929	64632	100	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=NA19317_ch_T0000001;Name=LOC124905300
NA19317_chrY	CAT	exon	62929	63456	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19317_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	62929	63456	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19317_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	62929	62931	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:NA19317_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	63457	63696	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19317_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	63697	64067	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19317_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	63697	64067	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19317_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64068	64374	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19317_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	64375	64412	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19317_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	64375	64412	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19317_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64413	64591	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:NA19317_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	64592	64632	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:NA19317_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	64592	64632	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:NA19317_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	64630	64632	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1,hg002_chrY_paternal_1.1;transcript_id=NA19317_ch_T0000001;gene_id=NA19317_ch_G0000001;Parent=NA19317_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:NA19317_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	63991	90790	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;gene_id=NA19317_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000002;Name=PLCXD1
NA19317_chrY	CAT	transcript	63991	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000002;Name=PLCXD1
NA19317_chrY	CAT	exon	63991	64029	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64030	68799	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	68800	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000002:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000002;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	63991	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000003;Name=PLCXD1
NA19317_chrY	CAT	exon	63991	64029	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64030	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000003;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	63991	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000004;Name=PLCXD1
NA19317_chrY	CAT	exon	63991	64029	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64030	68799	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	68800	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000004;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	63991	90790	1000	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=NA19317_ch_T0000005;Name=PLCXD1
NA19317_chrY	CAT	exon	63991	64029	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64030	68799	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	68800	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	86842	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	86843	90026	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	90027	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000005;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000005:8;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	64388	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000006;Name=PLCXD1
NA19317_chrY	CAT	exon	64388	64402	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	64403	68799	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	68800	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000006:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000006;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	68477	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000007;Name=PLCXD1
NA19317_chrY	CAT	exon	68477	68574	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	68575	68799	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	68800	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000007:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000007;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	68699	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000008;Name=PLCXD1
NA19317_chrY	CAT	exon	68699	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000008:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000008;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	68699	90790	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=NA19317_ch_T0000009;Name=PLCXD1
NA19317_chrY	CAT	exon	68699	69002	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	69003	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	87229	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	87230	89338	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	89339	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000009;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000009:7;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	70783	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000010;Name=PLCXD1
NA19317_chrY	CAT	exon	70783	70825	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	70826	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000010:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000010;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	70823	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000011;Name=PLCXD1
NA19317_chrY	CAT	exon	70823	71080	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71081	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000011:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000011;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	71216	90790	100	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=NA19317_ch_T0000012;Name=PLCXD1
NA19317_chrY	CAT	exon	71216	71561	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71562	71694	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	71695	71842	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	71716	71842	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	71716	71718	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:NA19317_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	71843	76478	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	76479	76615	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	76479	76615	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	76616	78394	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	78395	78523	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	78395	78523	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	78524	79245	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	79246	79401	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	79246	79401	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	79402	80781	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	80782	80965	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	80782	80965	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	80966	86546	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:NA19317_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	86547	90790	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:NA19317_ch_T0000012:6;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	86547	86785	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:NA19317_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	86783	86785	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000012;gene_id=NA19317_ch_G0000002;Parent=NA19317_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:NA19317_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	92193	106244	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=NA19317_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000003;Name=GTPBP6
NA19317_chrY	CAT	transcript	92193	104321	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19317_ch_T0000013;Name=GTPBP6
NA19317_chrY	CAT	exon	92193	92631	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	92508	92631	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	92508	92510	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19317_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	92632	94793	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	94794	94946	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	94794	94946	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	94947	95165	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	95166	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	95166	95314	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	95315	98852	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	98853	99061	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	98853	99061	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	99062	99965	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	99966	100358	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	99966	100358	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	100359	101743	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	101744	101811	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	101744	101811	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	101812	102483	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102484	102614	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102484	102614	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102615	102822	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102823	102893	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102823	102840	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	102838	102840	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19317_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102894	104255	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104256	104321	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000013;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000013:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	92193	106244	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19317_ch_T0000014;Name=GTPBP6
NA19317_chrY	CAT	exon	92193	92631	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	92508	92631	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	92508	92510	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19317_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	92632	94793	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	94794	94946	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	94794	94946	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	94947	95165	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	95166	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	95166	95314	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	95315	98852	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	98853	99061	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	98853	99061	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	99062	100199	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	100200	100358	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	100200	100358	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	100359	101743	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	101744	101811	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	101744	101811	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	101812	102483	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102484	102614	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102484	102614	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102615	102822	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102823	102893	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102823	102893	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102894	104389	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104390	104527	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	104390	104527	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104528	105886	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	105887	106244	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	105887	106235	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	106233	106235	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000014;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19317_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	92193	106244	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19317_ch_T0000015;Name=GTPBP6
NA19317_chrY	CAT	exon	92193	92631	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	92508	92631	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	92508	92510	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19317_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	92632	94793	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	94794	94946	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	94794	94946	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	94947	95165	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	95166	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	95166	95314	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	95315	98852	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	98853	99061	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	98853	99061	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	99062	99965	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	99966	100358	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	99966	100358	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	100359	101743	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	101744	101811	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	101744	101811	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	101812	102483	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102484	102614	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102484	102614	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102615	102822	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102823	102893	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102823	102893	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102894	104389	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104390	104527	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	104390	104527	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104528	105886	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	105887	106244	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	105887	106235	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	106233	106235	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000015;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19317_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	92193	106244	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19317_ch_T0000016;Name=GTPBP6
NA19317_chrY	CAT	exon	92193	92631	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	92508	92631	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	92508	92510	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19317_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	92632	94793	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	94794	94946	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	94794	94946	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	94947	95165	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	95166	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	95166	95314	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	95315	98852	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	98853	99061	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	98853	99061	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	99062	99965	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	99966	100358	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	99966	100358	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	100359	101743	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	101744	101811	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	101744	101811	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	101812	102483	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102484	102614	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102484	102614	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102615	102822	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102823	102893	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102823	102893	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102894	104389	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104390	104527	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	104390	104459	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	104457	104459	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19317_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104528	104731	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104732	104937	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104938	105886	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	105887	106244	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000016;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000016:10;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	92193	106244	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=NA19317_ch_T0000017;Name=GTPBP6
NA19317_chrY	CAT	exon	92193	92631	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	92508	92631	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	92508	92510	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:NA19317_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	92632	94793	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	94794	94946	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	94794	94946	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	94947	95165	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	95166	95314	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	95166	95314	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	95315	98852	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	98853	99061	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	98853	99061	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	99062	99965	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	99966	100358	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	99966	100358	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	100359	101743	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	101744	101811	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	101744	101811	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	101812	102483	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102484	102614	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102484	102614	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102615	102822	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	102823	102893	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	102823	102893	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	102894	104389	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104390	104527	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	104390	104459	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:NA19317_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	104457	104459	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:NA19317_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104528	104731	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	104732	104872	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	104873	105886	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:NA19317_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	105887	106244	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000017;gene_id=NA19317_ch_G0000003;Parent=NA19317_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:NA19317_ch_T0000017:10;Name=GTPBP6;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	106593	108779	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;gene_id=NA19317_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap_pairwise;ID=NA19317_ch_G0000004;Name=LINC00685
NA19317_chrY	CAT	transcript	106593	108779	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000018;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=NA19317_ch_T0000018;Name=LINC00685
NA19317_chrY	CAT	exon	106593	106996	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000018;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19317_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	106997	107652	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000018;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:NA19317_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	107653	108779	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000018;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19317_ch_T0000018:1;Name=LINC00685;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	106593	108779	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000019;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=NA19317_ch_T0000019;Name=LINC00685
NA19317_chrY	CAT	exon	106593	108779	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000019;gene_id=NA19317_ch_G0000004;Parent=NA19317_ch_T0000019;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:NA19317_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	125069	178775	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;gene_id=NA19317_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000005;Name=PPP2R3B
NA19317_chrY	CAT	transcript	125069	168037	100	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000020;Name=PPP2R3B
NA19317_chrY	CAT	exon	125069	125653	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	125653	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	125654	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151849	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	165359	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	165360	168037	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	165360	165599	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	165597	165599	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000020;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125069	178775	100	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000021;Name=PPP2R3B
NA19317_chrY	CAT	exon	125069	125653	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	125653	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	125654	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151849	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	178235	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	178236	178775	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	178236	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	178557	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000021;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125374	156097	100	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000022;Name=PPP2R3B
NA19317_chrY	CAT	exon	125374	126199	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	126199	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	126200	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	151688	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	152513	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	152514	152591	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	152592	155541	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	155542	156097	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000022;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000022:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125374	168037	100	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000023;Name=PPP2R3B
NA19317_chrY	CAT	exon	125374	126199	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	126199	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	126200	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151849	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	165359	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	165360	168037	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	165360	165599	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	165597	165599	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000023;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125374	178775	100	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000024;Name=PPP2R3B
NA19317_chrY	CAT	exon	125374	126199	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	126199	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	126200	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151849	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	178235	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	178236	178775	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	178236	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	178557	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000024;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125374	178775	100	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000025;Name=PPP2R3B
NA19317_chrY	CAT	exon	125374	126199	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	126199	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	126200	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	151688	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	152513	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	152514	152591	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	152592	178235	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	178236	178775	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000025;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000025:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	125374	178775	100	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000026;Name=PPP2R3B
NA19317_chrY	CAT	exon	125374	126199	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	125503	126199	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	125503	125505	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	126200	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	151688	151690	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	152513	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	152514	152591	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	152592	176910	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	176911	176974	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	176975	178235	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	178236	178775	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000026;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000026:14;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	126094	178775	100	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=NA19317_ch_T0000027;Name=PPP2R3B
NA19317_chrY	CAT	exon	126094	127134	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	127014	127134	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	127014	127016	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:NA19317_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	127135	129737	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129738	129844	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129738	129844	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	129845	129911	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	129912	130030	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	129912	130030	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	130031	131846	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	131847	132022	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	131847	132022	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132023	132349	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132350	132439	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132350	132439	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132440	132924	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	132925	132973	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	132925	132973	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	132974	135586	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	135587	135743	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	135587	135743	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	135744	136257	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136258	136344	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136258	136344	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136345	136784	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	136785	136859	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	136785	136859	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	136860	137317	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137318	137420	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137318	137420	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137421	137673	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	137674	137777	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	137674	137777	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	137778	151663	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	151664	151849	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	151664	151849	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	151850	178235	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:NA19317_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	178236	178775	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:NA19317_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	178236	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:NA19317_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	178557	178559	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000027;gene_id=NA19317_ch_G0000005;Parent=NA19317_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:NA19317_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	222171	264476	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;gene_id=NA19317_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff,transMap_pairwise;ID=NA19317_ch_G0000006;Name=LOC102724521
NA19317_chrY	CAT	transcript	222171	264476	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=NA19317_ch_T0000028;Name=LOC102724521
NA19317_chrY	CAT	exon	222171	222639	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	222640	225986	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	225987	226244	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	226245	227726	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	227727	227841	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	227842	229372	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	229373	229539	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	229540	232485	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	232486	232558	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	232559	232791	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	232792	233096	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	233097	251172	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	251173	251785	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	251786	261234	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	261235	261355	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	261356	262435	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	262436	262634	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	262635	263240	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:NA19317_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	263241	264476	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000028;gene_id=NA19317_ch_G0000006;Parent=NA19317_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:NA19317_ch_T0000028:9;Name=LOC102724521;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	428018	462093	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=NA19317_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000007;Name=SHOX
NA19317_chrY	CAT	transcript	428018	462093	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=NA19317_ch_T0000029;Name=SHOX
NA19317_chrY	CAT	exon	428018	428276	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	428277	433963	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000029:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	433964	434672	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	434396	434672	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000029:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	434396	434398	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:NA19317_ch_T0000029;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	434673	438115	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000029:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	438116	438324	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	438116	438324	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000029:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	438325	444133	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000029:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	444134	444191	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	444134	444191	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000029:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	444192	444311	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000029:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	444312	444400	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:4;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	444312	444400	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000029:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	444401	461467	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000029:4;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	461468	462093	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000029:5;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	461468	461512	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000029:4;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	461510	461512	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000029;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000029;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:NA19317_ch_T0000029;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	434289	454239	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=NA19317_ch_T0000030;Name=SHOX
NA19317_chrY	CAT	exon	434289	434672	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	434396	434672	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	434396	434398	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:NA19317_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	434673	438115	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	438116	438324	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	438116	438324	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	438325	444133	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	444134	444191	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	444134	444191	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	444192	444311	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	444312	444400	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	444312	444400	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	444401	447676	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:NA19317_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	447677	454239	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:NA19317_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	447677	447922	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:NA19317_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	447920	447922	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000030;gene_id=NA19317_ch_G0000007;Parent=NA19317_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:NA19317_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1000643	1023824	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=NA19317_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000008;Name=CRLF2
NA19317_chrY	CAT	transcript	1000643	1023824	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19317_ch_T0000031;Name=CRLF2
NA19317_chrY	CAT	exon	1000643	1001317	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1001054	1001317	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1001054	1001056	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19317_ch_T0000031;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1001318	1003367	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1003368	1003452	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1003368	1003452	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1003453	1006935	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1006936	1007056	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1006936	1007056	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1007057	1009709	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1009710	1009872	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1009710	1009872	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1009873	1013554	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1013555	1013688	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1013555	1013688	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1013689	1017605	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1017606	1017772	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1017606	1017618	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000031:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1017616	1017618	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19317_ch_T0000031;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1017773	1023730	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000031:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1023731	1023824	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000031;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000031;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000031:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1000643	1023824	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19317_ch_T0000032;Name=CRLF2
NA19317_chrY	CAT	exon	1000643	1001317	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1001054	1001317	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1001054	1001056	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19317_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1001318	1003367	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1003368	1003452	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1003368	1003452	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1003453	1006935	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1006936	1007056	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1006936	1007056	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1007057	1009709	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1009710	1009872	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1009710	1009872	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1009873	1013554	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1013555	1013688	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1013555	1013688	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1013689	1017605	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1017606	1017772	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1017606	1017772	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1017773	1019975	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1019976	1020078	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1019976	1020078	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1020079	1023730	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000032:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1023731	1023824	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000032:7;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1023731	1023809	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000032:7;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1023807	1023809	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000032;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19317_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1000643	1023824	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=NA19317_ch_T0000033;Name=CRLF2
NA19317_chrY	CAT	exon	1000643	1001317	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1001054	1001317	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1001054	1001056	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:NA19317_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1001318	1003367	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1003368	1003452	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1003368	1003452	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1003453	1006935	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1006936	1007056	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1006936	1007056	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1007057	1009709	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1009710	1009872	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1009710	1009872	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1009873	1013554	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1013555	1013688	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1013555	1013688	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1013689	1017605	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1017606	1017772	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1017606	1017772	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1017773	1019975	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1019976	1020075	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1019976	1020075	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1020076	1023730	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:NA19317_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1023731	1023824	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:NA19317_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1023731	1023809	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:NA19317_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1023807	1023809	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000033;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:NA19317_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1000643	1023824	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=NA19317_ch_T0000034;Name=CRLF2
NA19317_chrY	CAT	exon	1000643	1001317	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1001318	1003367	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1003368	1003452	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1003453	1006935	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1006936	1007056	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1007057	1009946	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1009947	1010291	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1010292	1013554	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1013555	1013688	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1013689	1017605	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1017606	1017772	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1017773	1019975	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1019976	1020075	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1020076	1023730	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:NA19317_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1023731	1023824	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000034;gene_id=NA19317_ch_G0000008;Parent=NA19317_ch_T0000034;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:NA19317_ch_T0000034:7;Name=CRLF2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1080403	1138896	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=NA19317_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000009;Name=CSF2RA
NA19317_chrY	CAT	transcript	1080403	1118972	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000035;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1118657	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118658	1118972	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118658	1118765	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118763	1118765	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000035;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000036;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1115949	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1115950	1116051	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1115950	1116051	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116052	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000036;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000037;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1115949	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1115950	1116051	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1115950	1116051	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116052	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000037:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000037;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000038;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000038;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000039;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088335	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088336	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000039;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000040;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000040;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000041;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108072	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108073	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108073	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1111692	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1111693	1111755	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1111693	1111755	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1111756	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000041;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000042;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1084413	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1084414	1084535	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1084536	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000042;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000042:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000043;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000043;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000044;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000044;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000045;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000045;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1118972	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000046;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1118657	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118658	1118972	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118658	1118765	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118763	1118765	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000046;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000047;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000047;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136340	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000048;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136139	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136140	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136140	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136340	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000048:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136263	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136261	1136263	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000048;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136517	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000049;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136517	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136385	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136383	1136385	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000049;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136517	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000050;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000050:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136517	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000050:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136385	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136383	1136385	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000050;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136517	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000051;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136517	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000051:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136385	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136383	1136385	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000051;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000052;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136139	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136140	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136140	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136182	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000052;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000053;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136162	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136160	1136162	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000053;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000054;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136162	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136160	1136162	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000054;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000055;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136139	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136140	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136140	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136182	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000055;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000056;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000056;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000057;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122781	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122779	1122781	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000057;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000058;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136139	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136140	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000058:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136140	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136182	1136184	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000058;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1136799	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000059;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136139	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136140	1136799	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000059;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1138896	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000060;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1125459	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1125460	1125566	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1125460	1125528	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1125526	1125528	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1125567	1138705	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000060:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1138706	1138896	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000060;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000060:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1138896	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000061;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1138705	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1138706	1138896	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1138706	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1138739	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000061;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1138896	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000062;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1138705	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1138706	1138896	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000062:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1138706	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1138739	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000062;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1138896	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000063;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1138705	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1138706	1138896	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000063;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1138896	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000064;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1138705	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000064:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1138706	1138896	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000064:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1138706	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1138739	1138741	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000064;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000065;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000065;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000066;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118531	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1118529	1118531	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000066;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000067;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096094	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096095	1096246	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096247	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000067:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000067:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000067:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000067;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000068;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088389	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088390	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1115949	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1115950	1116051	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1115950	1116051	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116052	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000068:13;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000068;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000069;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102448	1102521	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1102448	1102450	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1122594	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1122669	1122671	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000069;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1080403	1123127	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=NA19317_ch_T0000070;Name=CSF2RA
NA19317_chrY	CAT	exon	1080403	1080468	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1080469	1088325	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1088326	1088413	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1088414	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1122593	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1122594	1123127	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000070;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000070;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000070:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1095922	1136517	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000071;Name=CSF2RA
NA19317_chrY	CAT	exon	1095922	1096246	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096247	1096363	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1096364	1096465	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1096390	1096465	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1096390	1096392	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096466	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099415	1099557	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136517	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000071:12;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136385	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136383	1136385	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000071;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000071;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1096489	1136521	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=NA19317_ch_T0000072;Name=CSF2RA
NA19317_chrY	CAT	exon	1096489	1096728	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1096729	1099414	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1099415	1099557	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1099471	1099557	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1099471	1099473	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:NA19317_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1099558	1102151	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102152	1102275	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102152	1102275	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102276	1102391	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1102392	1102521	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1102392	1102521	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1102522	1103969	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1103970	1104142	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1103970	1104142	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1104143	1108053	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1108054	1108187	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1108054	1108187	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1108188	1109584	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1109585	1109614	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1109585	1109614	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1109615	1113180	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1113181	1113316	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1113181	1113316	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1113317	1116611	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1116612	1116708	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1116612	1116708	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1116709	1118475	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1118476	1118557	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1118476	1118557	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1118558	1136135	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136136	1136158	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136136	1136158	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1136159	1136246	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:NA19317_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1136247	1136521	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:NA19317_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1136247	1136385	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:NA19317_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1136383	1136385	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000072;gene_id=NA19317_ch_G0000009;Parent=NA19317_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:NA19317_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1107183	1107635	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=NA19317_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=NA19317_ch_G0000010;Name=LOC124905238
NA19317_chrY	CAT	transcript	1107183	1107635	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000073;gene_id=NA19317_ch_G0000010;Parent=NA19317_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=NA19317_ch_T0000073;Name=LOC124905238
NA19317_chrY	CAT	exon	1107183	1107219	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000073;gene_id=NA19317_ch_G0000010;Parent=NA19317_ch_T0000073;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:NA19317_ch_T0000073:0;Name=LOC124905238;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1107220	1107479	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000073;gene_id=NA19317_ch_G0000010;Parent=NA19317_ch_T0000073;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:NA19317_ch_T0000073:0;Name=LOC124905238;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1107480	1107635	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000073;gene_id=NA19317_ch_G0000010;Parent=NA19317_ch_T0000073;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:NA19317_ch_T0000073:1;Name=LOC124905238;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1107252	1107283	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=NA19317_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=NA19317_ch_G0000011;Name=MIR3690
NA19317_chrY	CAT	transcript	1107252	1107326	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=NA19317_ch_T0000074;gene_id=NA19317_ch_G0000011;Parent=NA19317_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=NA19317_ch_T0000074;Name=MIR3690
NA19317_chrY	CAT	exon	1107252	1107326	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=NA19317_ch_T0000074;gene_id=NA19317_ch_G0000011;Parent=NA19317_ch_T0000074;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:NA19317_ch_T0000074:0;Name=MIR3690;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1107261	1107283	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=NA19317_ch_T0000075;gene_id=NA19317_ch_G0000011;Parent=NA19317_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=NA19317_ch_T0000075;Name=MIR3690
NA19317_chrY	CAT	exon	1107261	1107283	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=NA19317_ch_T0000075;gene_id=NA19317_ch_G0000011;Parent=NA19317_ch_T0000075;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:NA19317_ch_T0000075:0;Name=MIR3690;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1107555	1107586	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=NA19317_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=NA19317_ch_G0000012;Name=MIR3690
NA19317_chrY	CAT	transcript	1107555	1107629	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=NA19317_ch_T0000076;gene_id=NA19317_ch_G0000012;Parent=NA19317_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=NA19317_ch_T0000076;Name=MIR3690
NA19317_chrY	CAT	exon	1107555	1107629	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=NA19317_ch_T0000076;gene_id=NA19317_ch_G0000012;Parent=NA19317_ch_T0000076;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:NA19317_ch_T0000076:0;Name=MIR3690;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1107564	1107586	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=NA19317_ch_T0000077;gene_id=NA19317_ch_G0000012;Parent=NA19317_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=NA19317_ch_T0000077;Name=MIR3690
NA19317_chrY	CAT	exon	1107564	1107586	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=NA19317_ch_T0000077;gene_id=NA19317_ch_G0000012;Parent=NA19317_ch_T0000077;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:NA19317_ch_T0000077:0;Name=MIR3690;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1151590	1191093	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=NA19317_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000013;Name=IL3RA
NA19317_chrY	CAT	transcript	1151590	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000078;Name=IL3RA
NA19317_chrY	CAT	exon	1151590	1151731	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1151732	1156775	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156776	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156814	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156814	1156816	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000078;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167388	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167389	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167389	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000078:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000078:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000078:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000078;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000078;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000078;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1151590	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000079;Name=IL3RA
NA19317_chrY	CAT	exon	1151590	1151731	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1151732	1156775	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156776	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156814	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156814	1156816	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167388	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167389	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167389	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000079:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000079:11;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000079:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000079;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1151590	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000080;Name=IL3RA
NA19317_chrY	CAT	exon	1151590	1151731	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1151732	1156778	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156779	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156814	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156814	1156816	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167388	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167389	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167389	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000080:11;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000080;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1151590	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000081;Name=IL3RA
NA19317_chrY	CAT	exon	1151590	1151731	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1151732	1156775	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156776	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156814	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156814	1156816	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167391	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167392	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167392	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000081:11;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000081;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1151590	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000082;Name=IL3RA
NA19317_chrY	CAT	exon	1151590	1151731	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1151732	1156778	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156779	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156814	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156814	1156816	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167391	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167392	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167392	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000082:11;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000082;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1156630	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000096;Name=IL3RA
NA19317_chrY	CAT	exon	1156630	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156634	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156634	1156636	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000096;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167388	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167389	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167389	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000096:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000096:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000096:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000096;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000096;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000096;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1156630	1191093	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=NA19317_ch_T0000097;Name=IL3RA
NA19317_chrY	CAT	exon	1156630	1156877	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1156634	1156877	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1156634	1156636	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:NA19317_ch_T0000097;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156878	1160373	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:0;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1160374	1160492	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1160374	1160492	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1160493	1163488	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:1;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1163489	1163603	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1163489	1163603	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1163604	1167166	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:2;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167167	1167299	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167167	1167299	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167300	1167391	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:3;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167392	1167573	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1167392	1167573	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167574	1171229	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:4;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1171230	1171345	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1171230	1171345	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171346	1173869	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:5;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173870	1173896	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1173870	1173896	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1173897	1180247	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:6;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180248	1180362	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1180248	1180362	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180363	1187062	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:7;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1187063	1187168	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1187063	1187168	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1187169	1189426	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:8;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1189427	1189508	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1189427	1189508	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1189509	1190794	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:NA19317_ch_T0000097:9;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1190795	1191093	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:NA19317_ch_T0000097:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1190795	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:NA19317_ch_T0000097:10;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1190867	1190869	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000097;gene_id=NA19317_ch_G0000013;Parent=NA19317_ch_T0000097;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:NA19317_ch_T0000097;Name=IL3RA;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1152379	1186880	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;gene_id=NA19317_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap,transMap_pairwise;ID=NA19317_ch_G0000014;Name=LOC101928032
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000083;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1176477	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1176478	1176856	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1176857	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000083:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=279.83299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000083;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000083:10;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000084;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1176477	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1176478	1176856	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1176857	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000084:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=277.61477777777776;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000084;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000084:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000085;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1176477	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1176478	1176856	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1176857	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182861	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182862	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000085:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=279.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000085;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000085:10;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000086;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000086:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=274.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000086;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000086:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000087;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000087:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000087;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000087:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1174481	1000	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000088;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1173768	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000088:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173769	1174481	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=271.1265714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000088;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000088:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1174481	1000	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000089;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1173542	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000089:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1173543	1174481	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=271.14757142857144;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000089;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000089;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000089:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000090;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182861	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182862	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000090:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000090;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000090;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000090:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000091;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182874	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182875	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000091:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=277.6637777777778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000091;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000091:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000092;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1182874	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182875	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000092:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000092;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000092;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000092:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000093;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1182861	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182862	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000093:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=274.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000093;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000093;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000093:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000094;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000094:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=271.3045714285714;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000094;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000094;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000094:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1152379	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000095;Name=LOC101928032
NA19317_chrY	CAT	exon	1152379	1152481	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152482	1152603	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152604	1152733	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1152734	1152855	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1152856	1153838	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1153839	1156645	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1156646	1156861	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1156862	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167538	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167539	1167686	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167687	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1176711	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:6;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1176712	1176856	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1176857	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:7;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:8;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000095:9;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=279.855;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000095;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000095;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000095:10;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1165833	1186880	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=NA19317_ch_T0000098;Name=LOC101928032
NA19317_chrY	CAT	exon	1165833	1165919	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1165920	1167376	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000098:0;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1167377	1167785	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1167786	1170580	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000098:1;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1170581	1171149	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1171150	1180212	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000098:2;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1180213	1180281	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1180282	1182878	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000098:3;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1182879	1183013	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1183014	1186725	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:NA19317_ch_T0000098:4;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1186726	1186880	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=NA19317_ch_T0000098;gene_id=NA19317_ch_G0000014;Parent=NA19317_ch_T0000098;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:NA19317_ch_T0000098:5;Name=LOC101928032;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1194556	1200516	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=NA19317_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000015;Name=SLC25A6
NA19317_chrY	CAT	transcript	1194556	1200516	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=NA19317_ch_T0000099;Name=SLC25A6
NA19317_chrY	CAT	exon	1194556	1195163	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19317_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1195006	1195163	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19317_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1195006	1195008	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:NA19317_ch_T0000099;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1195164	1195682	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19317_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1195683	1195823	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19317_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1195683	1195823	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19317_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1195824	1197644	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19317_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1197645	1198131	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19317_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1197645	1198131	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19317_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1198132	1200301	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:NA19317_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1200302	1200516	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:NA19317_ch_T0000099:3;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1200302	1200412	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:NA19317_ch_T0000099:3;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1200410	1200412	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000099;gene_id=NA19317_ch_G0000015;Parent=NA19317_ch_T0000099;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:NA19317_ch_T0000099;Name=SLC25A6;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1200396	1205287	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=NA19317_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000016;Name=LOC105373102
NA19317_chrY	CAT	transcript	1200396	1205287	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=NA19317_ch_T0000100;Name=LOC105373102
NA19317_chrY	CAT	exon	1200396	1200744	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000100:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1200396	1200744	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19317_ch_T0000100:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1200396	1200398	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:NA19317_ch_T0000100;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1200745	1203535	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:NA19317_ch_T0000100:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1203536	1203954	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000100:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1203536	1203954	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19317_ch_T0000100:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1203955	1204777	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:NA19317_ch_T0000100:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1204778	1205287	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000100:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1204778	1204798	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:NA19317_ch_T0000100:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1204796	1204798	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000100;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000100;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:NA19317_ch_T0000100;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1200396	1205287	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=NA19317_ch_T0000101;Name=LOC105373102
NA19317_chrY	CAT	exon	1200396	1200744	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000101:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1200745	1203535	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19317_ch_T0000101:0;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1203536	1203954	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000101:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1203955	1204777	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19317_ch_T0000101:1;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1204778	1204921	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000101:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1204922	1205015	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:NA19317_ch_T0000101:2;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1205016	1205287	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000101;gene_id=NA19317_ch_G0000016;Parent=NA19317_ch_T0000101;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:NA19317_ch_T0000101:3;Name=LOC105373102;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1205431	1207818	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=NA19317_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=NA19317_ch_G0000017;Name=LINC00106
NA19317_chrY	CAT	transcript	1205431	1207818	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=NA19317_ch_T0000102;Name=LINC00106
NA19317_chrY	CAT	exon	1205431	1205630	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_T0000102;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19317_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1205631	1207230	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_T0000102;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:NA19317_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1207231	1207364	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_T0000102;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19317_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1207365	1207772	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_T0000102;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:NA19317_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1207773	1207818	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=NA19317_ch_T0000102;gene_id=NA19317_ch_G0000017;Parent=NA19317_ch_T0000102;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:NA19317_ch_T0000102:2;Name=LINC00106;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1208933	1224618	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=NA19317_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=NA19317_ch_G0000018;Name=ASMTL-AS1
NA19317_chrY	CAT	transcript	1208933	1222764	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=NA19317_ch_T0000103;Name=ASMTL-AS1
NA19317_chrY	CAT	exon	1208933	1208988	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000103:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1208989	1209863	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000103:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1209864	1210627	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000103:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1210628	1211784	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000103:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1211785	1211909	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000103:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1211910	1221923	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000103:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1221924	1222764	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=NA19317_ch_T0000103;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000103;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000103:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1208933	1224618	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=NA19317_ch_T0000104;Name=ASMTL-AS1
NA19317_chrY	CAT	exon	1208933	1208988	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1208989	1209863	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000104:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1209864	1210627	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1210628	1211784	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000104:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1211785	1211909	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1211910	1221923	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000104:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1221924	1222069	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1222070	1222939	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000104:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1222940	1223488	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1223489	1223920	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:NA19317_ch_T0000104:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1223921	1224618	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=NA19317_ch_T0000104;gene_id=NA19317_ch_G0000018;Parent=NA19317_ch_T0000104;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:NA19317_ch_T0000104:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1211463	1263219	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;gene_id=NA19317_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=NA19317_ch_G0000019;Name=ASMTL
NA19317_chrY	CAT	transcript	1211463	1263219	9920	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19317_ch_T0000105;Name=ASMTL
NA19317_chrY	CAT	exon	1211463	1211813	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1211593	1211813	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1211593	1211595	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19317_ch_T0000105;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1211814	1221912	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1221913	1222035	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1221913	1222035	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1222036	1227148	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1227149	1227292	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1227149	1227292	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1227293	1228158	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1228159	1228291	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1228159	1228291	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1228292	1230831	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1230832	1231016	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1230832	1231016	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1231017	1234674	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1234675	1234837	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1234675	1234837	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1234838	1236883	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1236884	1237271	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1236884	1237271	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1237272	1241428	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1241429	1241537	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1241429	1241537	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1241538	1244719	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1244720	1244781	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1244720	1244781	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1244782	1245391	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1245392	1245456	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1245392	1245456	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1245457	1248792	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1248793	1248840	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1248793	1248840	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1248841	1251881	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1251882	1252013	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1251882	1252013	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1252014	1262306	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1262307	1262465	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:12;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1262307	1262399	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000105:12;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1262397	1262399	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19317_ch_T0000105;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1262466	1263098	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000105:12;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1263099	1263219	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.518;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000105;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000105;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000105:13;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1211463	1263219	9910	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19317_ch_T0000106;Name=ASMTL
NA19317_chrY	CAT	exon	1211463	1211813	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1211593	1211813	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1211593	1211595	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19317_ch_T0000106;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1211814	1221912	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1221913	1222035	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1221913	1222035	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1222036	1227148	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1227149	1227292	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1227149	1227292	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1227293	1228158	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1228159	1228291	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1228159	1228291	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1228292	1230831	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1230832	1231016	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1230832	1231016	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1231017	1234674	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1234675	1234837	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1234675	1234837	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1234838	1236883	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1236884	1237271	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1236884	1237271	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1237272	1241428	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1241429	1241537	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1241429	1241537	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1241538	1244719	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1244720	1244781	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1244720	1244781	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1244782	1248792	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1248793	1248840	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1248793	1248840	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1248841	1251881	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1251882	1252013	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1251882	1251943	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000106:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1251941	1251943	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19317_ch_T0000106;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1252014	1263098	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000106:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1263099	1263219	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.512;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000106;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000106;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000106:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1211463	1263219	9910	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=NA19317_ch_T0000107;Name=ASMTL
NA19317_chrY	CAT	exon	1211463	1211813	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1211593	1211813	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1211593	1211595	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:NA19317_ch_T0000107;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1211814	1221912	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:0;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1221913	1222035	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1221913	1222035	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1222036	1227148	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:1;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1227149	1227292	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1227149	1227292	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1227293	1228158	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:2;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1228159	1228291	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1228159	1228291	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1228292	1230831	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:3;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1230832	1231016	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1230832	1231016	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1231017	1234674	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:4;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1234675	1234837	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1234675	1234837	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1234838	1236883	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:5;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1236884	1237271	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1236884	1237271	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1237272	1241428	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:6;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1241429	1241537	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1241429	1241537	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1241538	1244719	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:7;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1244720	1244781	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1244720	1244781	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1244782	1245391	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:8;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1245392	1245456	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1245392	1245456	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1245457	1248792	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:9;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1248793	1248840	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1248793	1248840	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1248841	1251881	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:10;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1251882	1252013	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1251882	1251932	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:NA19317_ch_T0000107:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1251930	1251932	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:NA19317_ch_T0000107;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1252014	1263098	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:NA19317_ch_T0000107:11;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1263099	1263219	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.46800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=NA19317_ch_T0000107;gene_id=NA19317_ch_G0000019;Parent=NA19317_ch_T0000107;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:NA19317_ch_T0000107:12;Name=ASMTL;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1272347	1347649	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=NA19317_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000020;Name=P2RY8
NA19317_chrY	CAT	transcript	1272347	1277488	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19317_ch_T0000108;Name=P2RY8
NA19317_chrY	CAT	exon	1272347	1276347	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000108:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1275244	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19317_ch_T0000108:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1275244	1275246	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19317_ch_T0000108;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1276321	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19317_ch_T0000108;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1276348	1276792	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000108:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1276793	1277488	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000108;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000108;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000108:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1272347	1303556	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19317_ch_T0000109;Name=P2RY8
NA19317_chrY	CAT	exon	1272347	1276347	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000109:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1275244	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19317_ch_T0000109:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1275244	1275246	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19317_ch_T0000109;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1276321	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19317_ch_T0000109;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1276348	1303501	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000109:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1303502	1303556	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000109;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000109;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000109:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1272347	1305209	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19317_ch_T0000110;Name=P2RY8
NA19317_chrY	CAT	exon	1272347	1276347	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000110:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1275244	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19317_ch_T0000110:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1275244	1275246	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19317_ch_T0000110;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1276321	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19317_ch_T0000110;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1276348	1304592	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000110:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1304593	1305209	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000110;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000110;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000110:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1272347	1347649	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19317_ch_T0000111;Name=P2RY8
NA19317_chrY	CAT	exon	1272347	1276347	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000111:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1275244	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19317_ch_T0000111:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1275244	1275246	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19317_ch_T0000111;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1276321	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19317_ch_T0000111;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1276348	1347384	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000111:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1347385	1347649	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000111;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000111;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000111:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1272347	1347649	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=NA19317_ch_T0000112;Name=P2RY8
NA19317_chrY	CAT	exon	1272347	1276347	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000112:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1275244	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:NA19317_ch_T0000112:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1275244	1275246	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:NA19317_ch_T0000112;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1276321	1276323	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:NA19317_ch_T0000112;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1276348	1278268	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000112:0;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1278269	1278437	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000112:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1278438	1347384	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:NA19317_ch_T0000112:1;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1347385	1347649	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000112;gene_id=NA19317_ch_G0000020;Parent=NA19317_ch_T0000112;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:NA19317_ch_T0000112:2;Name=P2RY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1401680	1412409	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=NA19317_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000021;Name=AKAP17A
NA19317_chrY	CAT	transcript	1401680	1412409	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=NA19317_ch_T0000113;Name=AKAP17A
NA19317_chrY	CAT	exon	1401680	1401845	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000113:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1401846	1403519	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000113:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1403520	1404300	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000113:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1403539	1404300	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19317_ch_T0000113:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1403539	1403541	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:NA19317_ch_T0000113;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1404301	1405431	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000113:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1405432	1405580	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000113:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1405432	1405580	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19317_ch_T0000113:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1405581	1409080	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000113:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1409081	1409321	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000113:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1409081	1409321	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19317_ch_T0000113:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1409322	1410547	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000113:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1410548	1412409	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000113:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1410548	1411483	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:NA19317_ch_T0000113:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1411481	1411483	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000113;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000113;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:NA19317_ch_T0000113;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1401680	1412409	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=NA19317_ch_T0000114;Name=AKAP17A
NA19317_chrY	CAT	exon	1401680	1401845	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1401846	1403519	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000114:0;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1403520	1404300	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1404301	1405431	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000114:1;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1405432	1405580	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1405581	1409080	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000114:2;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1409081	1409321	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1409322	1410026	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000114:3;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1410027	1410096	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1410097	1410547	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:NA19317_ch_T0000114:4;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1410548	1412409	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000114;gene_id=NA19317_ch_G0000021;Parent=NA19317_ch_T0000114;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:NA19317_ch_T0000114:5;Name=AKAP17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1405503	1448882	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=NA19317_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000022;Name=ASMT
NA19317_chrY	CAT	transcript	1405503	1448882	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19317_ch_T0000115;Name=ASMT
NA19317_chrY	CAT	exon	1405503	1405580	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1405581	1425008	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1425009	1425144	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1425076	1425144	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1425076	1425078	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19317_ch_T0000115;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1425145	1433008	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1433009	1433183	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1433009	1433183	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1433184	1434138	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1434139	1434268	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1434139	1434268	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1434269	1437285	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1437286	1437354	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1437286	1437354	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1437355	1439394	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1439395	1439513	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1439395	1439513	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1439514	1442283	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1442284	1442367	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1442284	1442367	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1442368	1442728	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1442729	1442869	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1442729	1442869	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1442870	1446022	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1446023	1446145	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:8;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1446023	1446145	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1446146	1448603	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000115:8;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1448604	1448882	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000115:9;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1448604	1448815	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000115:8;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1448813	1448815	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000115;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000115;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19317_ch_T0000115;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1424935	1448882	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19317_ch_T0000116;Name=ASMT
NA19317_chrY	CAT	exon	1424935	1425144	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1425076	1425144	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1425076	1425078	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19317_ch_T0000116;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1425145	1433008	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1433009	1433183	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1433009	1433183	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1433184	1434138	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1434139	1434268	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1434139	1434268	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1434269	1437285	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1437286	1437354	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1437286	1437354	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1437355	1439394	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1439395	1439513	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1439395	1439513	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1439514	1442283	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1442284	1442367	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1442284	1442367	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1442368	1442728	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1442729	1442869	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1442729	1442869	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1442870	1446022	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1446023	1446145	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1446023	1446145	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1446146	1448603	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000116:7;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1448604	1448882	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000116:8;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1448604	1448815	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000116:8;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1448813	1448815	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000116;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000116;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19317_ch_T0000116;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1425009	1448882	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=NA19317_ch_T0000117;Name=ASMT
NA19317_chrY	CAT	exon	1425009	1425144	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1425076	1425144	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	1425076	1425078	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:NA19317_ch_T0000117;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1425145	1433008	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:0;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1433009	1433183	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1433009	1433183	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1433184	1434138	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:1;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1434139	1434268	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1434139	1434268	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1434269	1437285	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:2;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1437286	1437354	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1437286	1437354	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1437355	1439394	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:3;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1439395	1439513	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1439395	1439513	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1439514	1446022	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:4;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1446023	1446145	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1446023	1446145	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1446146	1448603	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:NA19317_ch_T0000117:5;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1448604	1448882	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:NA19317_ch_T0000117:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1448604	1448815	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:NA19317_ch_T0000117:6;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1448813	1448815	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000117;gene_id=NA19317_ch_G0000022;Parent=NA19317_ch_T0000117;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:NA19317_ch_T0000117;Name=ASMT;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1538899	1562495	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=NA19317_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=NA19317_ch_G0000023;Name=LINC02968
NA19317_chrY	CAT	transcript	1538899	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000118;Name=LINC02968
NA19317_chrY	CAT	exon	1538899	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540434	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540435	1540678	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540679	1549986	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1549987	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000118:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=NA19317_ch_T0000118;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000118;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000118:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1538953	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000119;Name=LINC02968
NA19317_chrY	CAT	exon	1538953	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540431	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540432	1540693	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540694	1548435	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1548436	1548531	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1548532	1549789	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1549790	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000119:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=NA19317_ch_T0000119;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000119;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000119:7;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1539036	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000120;Name=LINC02968
NA19317_chrY	CAT	exon	1539036	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540431	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540432	1540678	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540679	1548435	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1548436	1548531	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1548532	1549986	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1549987	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000120:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=NA19317_ch_T0000120;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000120;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000120:7;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1539036	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000121;Name=LINC02968
NA19317_chrY	CAT	exon	1539036	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540431	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540432	1540678	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540679	1548435	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1548436	1548531	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1548532	1549983	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1549984	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000121:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=NA19317_ch_T0000121;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000121;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000121:7;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1539036	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000122;Name=LINC02968
NA19317_chrY	CAT	exon	1539036	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540434	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540435	1540678	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540679	1548435	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1548436	1548531	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1548532	1549986	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1549987	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000122:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=NA19317_ch_T0000122;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000122;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000122:7;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1539036	1562495	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=NA19317_ch_T0000123;Name=LINC02968
NA19317_chrY	CAT	exon	1539036	1539203	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1539204	1540431	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:0;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1540432	1540678	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1540679	1548435	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:1;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1548436	1548531	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1548532	1550094	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:2;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550095	1550200	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1550201	1550293	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:3;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1550294	1551080	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1551081	1553797	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:4;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1553798	1554053	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1554054	1557797	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:5;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1557798	1557857	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1557858	1562194	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:NA19317_ch_T0000123:6;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1562195	1562495	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=NA19317_ch_T0000123;gene_id=NA19317_ch_G0000023;Parent=NA19317_ch_T0000123;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:NA19317_ch_T0000123:7;Name=LINC02968;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1576532	1589882	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=NA19317_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=NA19317_ch_G0000024;Name=LOC105379413
NA19317_chrY	CAT	transcript	1576532	1589882	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=NA19317_ch_T0000124;Name=LOC105379413
NA19317_chrY	CAT	exon	1576532	1577108	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000124;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000124:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1577109	1581609	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000124;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19317_ch_T0000124:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1581610	1581823	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000124;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000124:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1581824	1586749	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000124;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19317_ch_T0000124:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1586750	1589882	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=NA19317_ch_T0000124;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000124;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000124:2;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	1576532	1589882	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=NA19317_ch_T0000125;Name=LOC105379413
NA19317_chrY	CAT	exon	1576532	1577108	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000125;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000125:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1577109	1581609	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000125;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19317_ch_T0000125:0;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1581610	1581772	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000125;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000125:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1581773	1586749	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000125;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:NA19317_ch_T0000125:1;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1586750	1589882	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=NA19317_ch_T0000125;gene_id=NA19317_ch_G0000024;Parent=NA19317_ch_T0000125;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:NA19317_ch_T0000125:2;Name=LOC105379413;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1684781	1691023	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=NA19317_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=NA19317_ch_G0000025;Name=LOC107985677
NA19317_chrY	CAT	transcript	1684781	1691023	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=NA19317_ch_T0000126;Name=LOC107985677
NA19317_chrY	CAT	exon	1684781	1685839	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:0;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1685840	1686929	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19317_ch_T0000126:0;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1686930	1687043	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:1;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1687044	1687532	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19317_ch_T0000126:1;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1687533	1687663	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:2;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1687664	1688994	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19317_ch_T0000126:2;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1688995	1689309	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:3;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1689310	1689709	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19317_ch_T0000126:3;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1689710	1690309	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:4;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1690310	1690684	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:NA19317_ch_T0000126:4;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1690685	1691023	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=NA19317_ch_T0000126;gene_id=NA19317_ch_G0000025;Parent=NA19317_ch_T0000126;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:NA19317_ch_T0000126:5;Name=LOC107985677;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1839774	2118156	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=NA19317_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000026;Name=DHRSX
NA19317_chrY	CAT	transcript	1839774	2118156	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=NA19317_ch_T0000127;Name=DHRSX
NA19317_chrY	CAT	exon	1839774	1841497	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:0;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1841309	1841497	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:0;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	1841309	1841311	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:NA19317_ch_T0000127;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1841498	1863544	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:0;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1863545	1863752	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:1;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1863545	1863752	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:1;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1863753	1887419	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:1;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1887420	1887627	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:2;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1887420	1887627	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:2;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1887628	1907440	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:2;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1907441	1907542	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:3;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	1907441	1907542	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:3;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1907543	2029966	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:3;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2029967	2030035	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:4;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2029967	2030035	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:4;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2030036	2046420	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:4;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2046421	2046528	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:5;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2046421	2046528	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:5;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2046529	2117996	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:NA19317_ch_T0000127:5;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2117997	2118156	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:NA19317_ch_T0000127:6;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2117997	2118105	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:NA19317_ch_T0000127:6;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2118103	2118105	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000127;gene_id=NA19317_ch_G0000026;Parent=NA19317_ch_T0000127;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:NA19317_ch_T0000127;Name=DHRSX;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	1941726	1958789	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=NA19317_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=NA19317_ch_G0000027;Name=LOC124905239
NA19317_chrY	CAT	transcript	1941726	1958789	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=NA19317_ch_T0000128;Name=LOC124905239
NA19317_chrY	CAT	exon	1941726	1942999	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_T0000128;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19317_ch_T0000128:0;Name=LOC124905239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1943000	1950505	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_T0000128;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:NA19317_ch_T0000128:0;Name=LOC124905239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1950506	1950632	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_T0000128;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19317_ch_T0000128:1;Name=LOC124905239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	1950633	1958622	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_T0000128;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:NA19317_ch_T0000128:1;Name=LOC124905239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	1958623	1958789	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=NA19317_ch_T0000128;gene_id=NA19317_ch_G0000027;Parent=NA19317_ch_T0000128;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:NA19317_ch_T0000128:2;Name=LOC124905239;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2103612	2118156	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=NA19317_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000028;Name=ZBED1
NA19317_chrY	CAT	transcript	2103612	2117805	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19317_ch_T0000129;Name=ZBED1
NA19317_chrY	CAT	exon	2103612	2107949	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000129:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2105812	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19317_ch_T0000129:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2105812	2105814	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19317_ch_T0000129;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2107894	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19317_ch_T0000129;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2107950	2117490	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19317_ch_T0000129:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2117491	2117805	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000129;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000129;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000129:1;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2103612	2118156	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19317_ch_T0000130;Name=ZBED1
NA19317_chrY	CAT	exon	2103612	2107949	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000130:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2105812	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19317_ch_T0000130:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2105812	2105814	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19317_ch_T0000130;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2107894	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19317_ch_T0000130;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2107950	2117996	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19317_ch_T0000130:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2117997	2118156	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000130;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000130;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000130:1;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2103612	2118156	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=NA19317_ch_T0000131;Name=ZBED1
NA19317_chrY	CAT	exon	2103612	2107946	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000131:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2105812	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:NA19317_ch_T0000131:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2105812	2105814	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:NA19317_ch_T0000131;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2107894	2107896	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:NA19317_ch_T0000131;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2107947	2117996	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:NA19317_ch_T0000131:0;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2117997	2118156	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000131;gene_id=NA19317_ch_G0000028;Parent=NA19317_ch_T0000131;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:NA19317_ch_T0000131:1;Name=ZBED1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2183155	2226315	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=NA19317_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=NA19317_ch_G0000029;Name=LOC101928092
NA19317_chrY	CAT	transcript	2183155	2191711	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19317_ch_T0000132;Name=LOC101928092
NA19317_chrY	CAT	exon	2183155	2184418	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000132;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000132:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2184419	2187133	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000132;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000132:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2187134	2187289	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000132;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000132:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2187290	2191173	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000132;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000132:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2191174	2191711	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=NA19317_ch_T0000132;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000132;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000132:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2183155	2191711	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19317_ch_T0000133;Name=LOC101928092
NA19317_chrY	CAT	exon	2183155	2184418	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000133;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000133:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2184419	2187133	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000133;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000133:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2187134	2187289	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000133;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000133:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2187290	2191190	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000133;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000133:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2191191	2191711	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=NA19317_ch_T0000133;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000133;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000133:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2183155	2226247	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19317_ch_T0000134;Name=LOC101928092
NA19317_chrY	CAT	exon	2183155	2184418	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000134;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000134:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2184419	2187133	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000134;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000134:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2187134	2187289	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000134;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000134:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2187290	2226180	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000134;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000134:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2226181	2226247	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=NA19317_ch_T0000134;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000134;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000134:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2183155	2226258	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19317_ch_T0000135;Name=LOC101928092
NA19317_chrY	CAT	exon	2183155	2184418	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000135:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2184419	2187133	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000135:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2187134	2187289	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000135:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2187290	2191173	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000135:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2191174	2191367	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000135:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2191368	2226180	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000135:2;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2226181	2226258	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=NA19317_ch_T0000135;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000135;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000135:3;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2183155	2226315	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19317_ch_T0000136;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=NA19317_ch_T0000136;Name=LOC101928092
NA19317_chrY	CAT	exon	2183155	2184418	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19317_ch_T0000136;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000136;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000136:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2184419	2226180	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19317_ch_T0000136;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000136;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:NA19317_ch_T0000136:0;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2226181	2226315	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=NA19317_ch_T0000136;gene_id=NA19317_ch_G0000029;Parent=NA19317_ch_T0000136;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:NA19317_ch_T0000136:1;Name=LOC101928092;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2226266	2226327	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=NA19317_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=NA19317_ch_G0000030;Name=MIR6089
NA19317_chrY	CAT	transcript	2226266	2226329	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=NA19317_ch_T0000137;gene_id=NA19317_ch_G0000030;Parent=NA19317_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=NA19317_ch_T0000137;Name=MIR6089
NA19317_chrY	CAT	exon	2226266	2226329	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=NA19317_ch_T0000137;gene_id=NA19317_ch_G0000030;Parent=NA19317_ch_T0000137;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:NA19317_ch_T0000137:0;Name=MIR6089;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2226304	2226327	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=NA19317_ch_T0000138;gene_id=NA19317_ch_G0000030;Parent=NA19317_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=NA19317_ch_T0000138;Name=MIR6089
NA19317_chrY	CAT	exon	2226304	2226327	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=NA19317_ch_T0000138;gene_id=NA19317_ch_G0000030;Parent=NA19317_ch_T0000138;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:NA19317_ch_T0000138:0;Name=MIR6089;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2226340	2275137	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=NA19317_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=NA19317_ch_G0000031;Name=CD99P1
NA19317_chrY	CAT	transcript	2226340	2256218	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=NA19317_ch_T0000139;Name=CD99P1
NA19317_chrY	CAT	exon	2226340	2226544	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:0;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2226545	2228058	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:0;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2228059	2228101	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:1;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2228102	2229212	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:1;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2229213	2229281	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:2;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2229282	2232877	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:2;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2232878	2233031	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:3;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2233032	2235799	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:3;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2235800	2235844	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:4;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2235845	2236488	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:4;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2236489	2236557	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:5;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2236558	2239752	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:5;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2239753	2239797	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:6;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2239798	2240447	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:6;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2240448	2240516	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:7;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2240517	2243664	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:7;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2243665	2243710	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:8;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2243711	2255862	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000139:8;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2255863	2256218	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=NA19317_ch_T0000139;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000139;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000139:9;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2226340	2275137	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=NA19317_ch_T0000140;Name=CD99P1
NA19317_chrY	CAT	exon	2226340	2226544	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:0;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2226545	2228058	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:0;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2228059	2228101	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:1;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2228102	2229212	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:1;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2229213	2229281	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:2;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2229282	2232877	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:2;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2232878	2233031	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:3;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2233032	2235799	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:3;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2235800	2235844	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:4;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2235845	2236488	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:4;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2236489	2236557	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:5;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2236558	2240447	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:5;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2240448	2240516	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:6;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2240517	2243664	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:6;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2243665	2243710	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:7;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2243711	2272934	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:NA19317_ch_T0000140:7;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2272935	2275137	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=NA19317_ch_T0000140;gene_id=NA19317_ch_G0000031;Parent=NA19317_ch_T0000140;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:NA19317_ch_T0000140:8;Name=CD99P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2230054	2232409	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=NA19317_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=NA19317_ch_G0000032;Name=LINC00102
NA19317_chrY	CAT	transcript	2230054	2232409	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19317_ch_T0000141;gene_id=NA19317_ch_G0000032;Parent=NA19317_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=NA19317_ch_T0000141;Name=LINC00102
NA19317_chrY	CAT	exon	2230054	2230759	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19317_ch_T0000141;gene_id=NA19317_ch_G0000032;Parent=NA19317_ch_T0000141;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:NA19317_ch_T0000141:0;Name=LINC00102;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2230760	2231778	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19317_ch_T0000141;gene_id=NA19317_ch_G0000032;Parent=NA19317_ch_T0000141;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:NA19317_ch_T0000141:0;Name=LINC00102;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2231779	2232409	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=NA19317_ch_T0000141;gene_id=NA19317_ch_G0000032;Parent=NA19317_ch_T0000141;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:NA19317_ch_T0000141:1;Name=LINC00102;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2308990	2359679	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=NA19317_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000033;Name=CD99
NA19317_chrY	CAT	transcript	2308990	2354807	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000142;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000142;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2335314	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2335315	2335362	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2335315	2335362	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2335363	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2341021	2341071	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2351726	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000142:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2351727	2354807	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2351727	2351734	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000142:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2351732	2351734	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000142;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000142;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000142;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000143;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000143;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2341021	2341071	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2356570	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356571	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2356571	2356627	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000143:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000143:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2359149	2359174	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000143:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2359172	2359174	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000143;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000143;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000143;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000144;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000144;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2335314	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2335315	2335362	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2335315	2335362	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2335363	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2341021	2341071	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2356573	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356574	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2356574	2356627	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000144:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000144:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2359149	2359174	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000144:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2359172	2359174	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000144;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000144;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000144;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000145;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000145;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2341021	2341071	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2356573	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356574	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2356574	2356627	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000145:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000145:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2359149	2359174	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000145:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2359172	2359174	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000145;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000145;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000145;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000146;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000146;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2335314	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2335315	2335362	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2335315	2335362	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2335363	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2356570	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356571	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2356571	2356627	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000146:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000146:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2359149	2359174	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000146:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2359172	2359174	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000146;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000146;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000146;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=NA19317_ch_T0000147;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2309056	2309122	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2309056	2309058	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:NA19317_ch_T0000147;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2332131	2332163	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2335314	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2335315	2335362	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2335315	2335362	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2335363	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2337369	2337413	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2338064	2338132	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2340334	2340381	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2341021	2341071	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2344558	2344671	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2356570	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356571	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2356571	2356627	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:NA19317_ch_T0000147:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:NA19317_ch_T0000147:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2359149	2359174	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:NA19317_ch_T0000147:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2359172	2359174	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000147;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000147;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:NA19317_ch_T0000147;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2308990	2359679	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=NA19317_ch_T0000148;Name=CD99
NA19317_chrY	CAT	exon	2308990	2309122	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2309123	2332130	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:0;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2332131	2332163	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2332164	2335314	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:1;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2335315	2335362	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2335363	2337368	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:2;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2337369	2337413	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2337414	2338063	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:3;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2338064	2338132	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2338133	2340333	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:4;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2340334	2340381	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2340382	2341020	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:5;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2341021	2341071	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2341072	2344557	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:6;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2344558	2344671	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2344672	2351726	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:7;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2351727	2351744	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2351745	2356573	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:8;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2356574	2356627	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2356628	2359148	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:NA19317_ch_T0000148:9;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2359149	2359679	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000148;gene_id=NA19317_ch_G0000033;Parent=NA19317_ch_T0000148;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:NA19317_ch_T0000148:10;Name=CD99;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2370677	2393216	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=NA19317_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=NA19317_ch_G0000034;Name=XGY2
NA19317_chrY	CAT	transcript	2370677	2393216	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=NA19317_ch_T0000149;Name=XGY2
NA19317_chrY	CAT	exon	2370677	2370716	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_T0000149;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19317_ch_T0000149:0;Name=XGY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2370717	2388913	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_T0000149;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:NA19317_ch_T0000149:0;Name=XGY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2388914	2388955	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_T0000149;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19317_ch_T0000149:1;Name=XGY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2388956	2392935	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_T0000149;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:NA19317_ch_T0000149:1;Name=XGY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2392936	2393216	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=NA19317_ch_T0000149;gene_id=NA19317_ch_G0000034;Parent=NA19317_ch_T0000149;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:NA19317_ch_T0000149:2;Name=XGY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2405065	2405892	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=NA19317_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000035;Name=SRY
NA19317_chrY	CAT	transcript	2405065	2405892	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000150;gene_id=NA19317_ch_G0000035;Parent=NA19317_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=NA19317_ch_T0000150;Name=SRY
NA19317_chrY	CAT	exon	2405065	2405892	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000150;gene_id=NA19317_ch_G0000035;Parent=NA19317_ch_T0000150;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:NA19317_ch_T0000150:0;Name=SRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2405199	2405813	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000150;gene_id=NA19317_ch_G0000035;Parent=NA19317_ch_T0000150;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:NA19317_ch_T0000150:0;Name=SRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2405199	2405201	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000150;gene_id=NA19317_ch_G0000035;Parent=NA19317_ch_T0000150;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:NA19317_ch_T0000150;Name=SRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2405811	2405813	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000150;gene_id=NA19317_ch_G0000035;Parent=NA19317_ch_T0000150;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:NA19317_ch_T0000150;Name=SRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2459797	2485463	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=NA19317_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000036;Name=RPS4Y1
NA19317_chrY	CAT	transcript	2459797	2485463	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=NA19317_ch_T0000151;Name=RPS4Y1
NA19317_chrY	CAT	exon	2459797	2459822	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2459820	2459822	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2459820	2459822	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:NA19317_ch_T0000151;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2459823	2460359	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2460360	2460437	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2460360	2460437	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2460438	2462271	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2462272	2462452	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2462272	2462452	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2462453	2463840	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2463841	2463938	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2463841	2463938	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2463939	2472794	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2472795	2472966	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2472795	2472966	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2472967	2483282	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2483283	2483440	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2483283	2483440	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2483441	2484987	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000151:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2484988	2485463	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000151:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2484988	2485089	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000151:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2485087	2485089	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000151;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000151;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:NA19317_ch_T0000151;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2459797	2485463	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=NA19317_ch_T0000152;Name=RPS4Y1
NA19317_chrY	CAT	exon	2459797	2460168	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2460139	2460168	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2460139	2460141	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:NA19317_ch_T0000152;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2460169	2460359	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:0;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2460360	2460437	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2460360	2460437	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2460438	2462271	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:1;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2462272	2462452	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2462272	2462452	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2462453	2463840	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:2;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2463841	2463938	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2463841	2463938	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2463939	2472794	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:3;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2472795	2472966	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2472795	2472966	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2472967	2483282	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:4;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2483283	2483440	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2483283	2483440	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2483441	2484987	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:NA19317_ch_T0000152:5;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2484988	2485463	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:NA19317_ch_T0000152:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2484988	2485089	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:NA19317_ch_T0000152:6;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2485087	2485089	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000152;gene_id=NA19317_ch_G0000036;Parent=NA19317_ch_T0000152;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:NA19317_ch_T0000152;Name=RPS4Y1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2553927	2601043	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=NA19317_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000037;Name=ZFY
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000153;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554315	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554316	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579629	2580184	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2579629	2579631	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000153;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000154;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000154;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000155;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000155:7;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000155;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000156;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554315	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554316	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579629	2580184	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2579629	2579631	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000156:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000156:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000156:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000156;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000157;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579629	2580184	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2579629	2579631	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000157:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000157;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000158;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554181	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554182	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579629	2580184	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2579629	2579631	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000158;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000159;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554315	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554316	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000159;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000160;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000160:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000160:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000160;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000160;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000160;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000161;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000161:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579629	2580184	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000161:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2579629	2579631	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000161;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000161:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000161:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000161:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000161:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000161:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000161:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000161:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000161:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000161:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000161;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000161;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000161;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000162;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2553992	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2553993	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000162:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000162:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000162;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000162:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000162:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000162:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000162:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000162:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000162:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000162:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000162:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000162:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000162;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000162;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000162;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000163;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554315	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000163:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554316	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000163:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000163:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593696	2593780	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000163:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2593696	2593698	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000163;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000163:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000163:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000163:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000163:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000163:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000163:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000163:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000163:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000163:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000163;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000163;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000163;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000164;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554315	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554316	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000164;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000164:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000164:7;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000164:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000164;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000164;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000164;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2553927	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000165;Name=ZFY
NA19317_chrY	CAT	exon	2553927	2554181	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2554182	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000165;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000165:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000165:7;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000165:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000165;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000165;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000165;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	2564724	2601043	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=NA19317_ch_T0000166;Name=ZFY
NA19317_chrY	CAT	exon	2564724	2564821	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2564822	2572450	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2572451	2572539	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2572479	2572539	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:0;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	2572479	2572481	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:NA19317_ch_T0000166;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2572540	2579611	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2579612	2580184	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2579612	2580184	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:1;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2580185	2593630	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2593631	2593780	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2593631	2593780	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:2;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2593781	2594046	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2594047	2594190	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2594047	2594190	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:3;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2594191	2595205	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2595206	2595358	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2595206	2595358	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:4;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2595359	2596476	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2596477	2596617	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2596477	2596617	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:5;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2596618	2597346	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:NA19317_ch_T0000166:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2597347	2601043	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:NA19317_ch_T0000166:7;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	2597347	2598530	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:NA19317_ch_T0000166:6;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	2598528	2598530	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000166;gene_id=NA19317_ch_G0000037;Parent=NA19317_ch_T0000166;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:NA19317_ch_T0000166;Name=ZFY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2585357	2621162	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=NA19317_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=NA19317_ch_G0000038;Name=ZFY-AS1
NA19317_chrY	CAT	transcript	2585357	2621162	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=NA19317_ch_T0000167;Name=ZFY-AS1
NA19317_chrY	CAT	exon	2585357	2585476	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_T0000167;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19317_ch_T0000167:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2585477	2600374	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_T0000167;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:NA19317_ch_T0000167:0;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2600375	2600464	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_T0000167;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19317_ch_T0000167:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2600465	2620848	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_T0000167;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:NA19317_ch_T0000167:1;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2620849	2621162	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=NA19317_ch_T0000167;gene_id=NA19317_ch_G0000038;Parent=NA19317_ch_T0000167;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:NA19317_ch_T0000167:2;Name=ZFY-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	2621532	2720811	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=NA19317_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=NA19317_ch_G0000039;Name=LINC00278
NA19317_chrY	CAT	transcript	2621532	2720811	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=NA19317_ch_T0000168;Name=LINC00278
NA19317_chrY	CAT	exon	2621532	2621753	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19317_ch_T0000168:0;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2621754	2697822	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19317_ch_T0000168:0;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2697823	2697880	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19317_ch_T0000168:1;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2697881	2715532	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19317_ch_T0000168:1;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2715533	2715594	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19317_ch_T0000168:2;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	2715595	2720623	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:NA19317_ch_T0000168:2;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	2720624	2720811	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=NA19317_ch_T0000168;gene_id=NA19317_ch_G0000039;Parent=NA19317_ch_T0000168;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:NA19317_ch_T0000168:3;Name=LINC00278;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	3197631	3198605	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=NA19317_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000040;Name=TGIF2LY
NA19317_chrY	CAT	transcript	3197631	3198605	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=NA19317_ch_T0000169;Name=TGIF2LY
NA19317_chrY	CAT	exon	3197631	3197691	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:NA19317_ch_T0000169:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3197692	3197787	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:NA19317_ch_T0000169:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3197788	3198605	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:NA19317_ch_T0000169:1;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	3197809	3198366	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:NA19317_ch_T0000169:0;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	3197809	3197811	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:NA19317_ch_T0000169;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	3198364	3198366	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000169;gene_id=NA19317_ch_G0000040;Parent=NA19317_ch_T0000169;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:NA19317_ch_T0000169;Name=TGIF2LY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	3419280	3454181	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=NA19317_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=NA19317_ch_G0000041;Name=LOC105377227
NA19317_chrY	CAT	transcript	3419280	3430287	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19317_ch_T0000170;Name=LOC105377227
NA19317_chrY	CAT	exon	3419280	3422581	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000170;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000170:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3422582	3423013	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000170;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000170:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3423014	3423125	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000170;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000170:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3423126	3428197	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000170;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000170:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3428198	3430287	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=NA19317_ch_T0000170;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000170;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000170:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	3419280	3451659	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19317_ch_T0000171;Name=LOC105377227
NA19317_chrY	CAT	exon	3419280	3422581	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000171:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3422582	3423013	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000171:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3423014	3423125	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000171:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3423126	3428197	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000171:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3428198	3428372	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000171:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3428373	3451029	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000171:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3451030	3451659	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=NA19317_ch_T0000171;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000171;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000171:3;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	3419280	3454181	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=NA19317_ch_T0000172;Name=LOC105377227
NA19317_chrY	CAT	exon	3419280	3422581	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000172;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000172:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3422582	3423013	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000172;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000172:0;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3423014	3423125	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000172;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000172:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	3423126	3454086	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000172;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:NA19317_ch_T0000172:1;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	3454087	3454181	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=NA19317_ch_T0000172;gene_id=NA19317_ch_G0000041;Parent=NA19317_ch_T0000172;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:NA19317_ch_T0000172:2;Name=LOC105377227;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	4226973	4227011	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=NA19317_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=NA19317_ch_G0000042;Name=MIR9985
NA19317_chrY	CAT	transcript	4226973	4227083	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=NA19317_ch_T0000173;gene_id=NA19317_ch_G0000042;Parent=NA19317_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=NA19317_ch_T0000173;Name=MIR9985
NA19317_chrY	CAT	exon	4226973	4227083	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=NA19317_ch_T0000173;gene_id=NA19317_ch_G0000042;Parent=NA19317_ch_T0000173;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:NA19317_ch_T0000173:0;Name=MIR9985;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4226993	4227011	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=NA19317_ch_T0000174;gene_id=NA19317_ch_G0000042;Parent=NA19317_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=NA19317_ch_T0000174;Name=MIR9985
NA19317_chrY	CAT	exon	4226993	4227011	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=NA19317_ch_T0000174;gene_id=NA19317_ch_G0000042;Parent=NA19317_ch_T0000174;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:NA19317_ch_T0000174:0;Name=MIR9985;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	4621190	5363565	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=NA19317_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000043;Name=PCDH11Y
NA19317_chrY	CAT	transcript	4621190	4726508	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000175;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4651804	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4651805	4651973	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4651974	4652811	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652812	4652917	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652918	4653575	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4653576	4653634	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4653603	4653634	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4653603	4653605	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4653635	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677795	4678365	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	4725253	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000175:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4725254	4726508	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000175:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4725254	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	4725269	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000175;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4621190	4726508	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000176;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4652811	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652812	4652917	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652918	4653575	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4653576	4653634	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4653603	4653634	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000176:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4653603	4653605	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4653635	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677795	4678365	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000176:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000176:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	4725253	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000176:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4725254	4726508	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000176:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4725254	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000176:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	4725269	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000176;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000176;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000176;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4621190	5363561	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000177;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000177:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4678006	4678365	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000177:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4678006	4678008	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000177;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000177:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000177:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	5121966	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000177:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5121967	5122165	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5121967	5122165	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000177:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5122166	5203116	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000177:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5203117	5203140	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5203117	5203140	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000177:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5203141	5358608	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000177:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5358609	5363561	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000177:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5358609	5359279	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000177:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	5359277	5359279	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000177;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000177;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000177;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4621190	5363565	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000178;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4623581	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4623582	4627629	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4627630	4651804	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4651805	4651973	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4651974	4652120	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652121	4652252	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652253	4652811	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652812	4652917	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652918	4653575	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4653576	4653634	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4653603	4653634	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4653603	4653605	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000178;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4653635	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677795	4678365	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	5121966	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5121967	5122165	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5121967	5122165	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5122166	5203116	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5203117	5203140	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5203117	5203140	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5203141	5358608	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000178:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5358609	5363565	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000178:10;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5358609	5359279	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000178:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	5359277	5359279	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000178;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000178;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000178;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4621190	5363565	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000179;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4651804	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4651805	4651973	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4651974	4652120	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652121	4652252	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652253	4652811	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652812	4652917	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652918	4653575	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4653576	4653634	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4653603	4653634	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4653603	4653605	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000179;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4653635	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677795	4678365	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	5121966	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5121967	5122165	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5121967	5122165	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5122166	5203116	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5203117	5203140	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5203117	5203140	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5203141	5358608	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000179:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5358609	5363565	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000179:9;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5358609	5359279	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000179:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	5359277	5359279	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000179;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000179;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000179;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4621190	5363565	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000180;Name=PCDH11Y
NA19317_chrY	CAT	exon	4621190	4621499	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4621500	4623581	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4623582	4623652	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4623653	4652811	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4652812	4652917	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4652918	4653575	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4653576	4653634	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4653603	4653634	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4653603	4653605	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000180;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4653635	4677794	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4677795	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677795	4678365	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	5121966	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5121967	5122165	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5121967	5122165	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5122166	5203116	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:6;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5203117	5203140	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5203117	5203140	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5203141	5358608	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000180:7;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5358609	5363565	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000180:8;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5358609	5359279	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000180:5;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	5359277	5359279	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000180;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000180;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000180;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4676994	4726508	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000181;Name=PCDH11Y
NA19317_chrY	CAT	exon	4676994	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000181:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677730	4678365	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000181:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4677730	4677732	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000181;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000181:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000181:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000181:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	4725253	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000181:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4725254	4726508	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000181:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4725254	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000181:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	4725269	4725271	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000181;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000181;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000181;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	4676996	5363565	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=NA19317_ch_T0000182;Name=PCDH11Y
NA19317_chrY	CAT	exon	4676996	4678365	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000182:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4677730	4678365	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000182:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	4677730	4677732	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:NA19317_ch_T0000182;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4678366	4719124	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000182:0;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	4719125	4721617	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000182:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	4719125	4721617	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000182:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	4721618	5121966	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000182:1;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5121967	5122165	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000182:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5121967	5122165	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000182:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5122166	5203116	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000182:2;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5203117	5203140	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000182:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5203117	5203140	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000182:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5203141	5358608	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:NA19317_ch_T0000182:3;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5358609	5363565	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:NA19317_ch_T0000182:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	5358609	5359279	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:NA19317_ch_T0000182:4;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	5359277	5359279	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000182;gene_id=NA19317_ch_G0000043;Parent=NA19317_ch_T0000182;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:NA19317_ch_T0000182;Name=PCDH11Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	5863752	5864916	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=NA19317_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=NA19317_ch_G0000044;Name=TTTY23
NA19317_chrY	CAT	transcript	5863752	5864916	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_G0000044;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=NA19317_ch_T0000183;Name=TTTY23
NA19317_chrY	CAT	exon	5863752	5864060	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_T0000183;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19317_ch_T0000183:0;Name=TTTY23;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5864061	5864600	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_T0000183;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:NA19317_ch_T0000183:0;Name=TTTY23;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5864601	5864746	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_T0000183;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19317_ch_T0000183:1;Name=TTTY23;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5864747	5864859	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_T0000183;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:NA19317_ch_T0000183:1;Name=TTTY23;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5864860	5864916	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=NA19317_ch_T0000183;gene_id=NA19317_ch_G0000044;Parent=NA19317_ch_T0000183;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:NA19317_ch_T0000183:2;Name=TTTY23;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	5958202	5962412	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=NA19317_ch_G0000045;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=NA19317_ch_G0000045;Name=LINC00280
NA19317_chrY	CAT	transcript	5958202	5962412	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_G0000045;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=NA19317_ch_T0000184;Name=LINC00280
NA19317_chrY	CAT	exon	5958202	5958420	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_T0000184;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000184:0;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5958421	5959682	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_T0000184;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:NA19317_ch_T0000184:0;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5959683	5959825	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_T0000184;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000184:1;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5959826	5962326	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_T0000184;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:NA19317_ch_T0000184:1;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5962327	5962412	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=NA19317_ch_T0000184;gene_id=NA19317_ch_G0000045;Parent=NA19317_ch_T0000184;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000184:2;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	5962482	5964566	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=NA19317_ch_G0000046;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=NA19317_ch_G0000046;Name=TTTY22
NA19317_chrY	CAT	transcript	5962482	5964566	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=NA19317_ch_T0000185;gene_id=NA19317_ch_G0000046;Parent=NA19317_ch_G0000046;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=NA19317_ch_T0000185;Name=TTTY22
NA19317_chrY	CAT	exon	5962482	5962527	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=NA19317_ch_T0000185;gene_id=NA19317_ch_G0000046;Parent=NA19317_ch_T0000185;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19317_ch_T0000185:0;Name=TTTY22;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5962528	5964411	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=NA19317_ch_T0000185;gene_id=NA19317_ch_G0000046;Parent=NA19317_ch_T0000185;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:NA19317_ch_T0000185:0;Name=TTTY22;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5964412	5964566	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=NA19317_ch_T0000185;gene_id=NA19317_ch_G0000046;Parent=NA19317_ch_T0000185;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:NA19317_ch_T0000185:1;Name=TTTY22;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	5967620	5970927	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;gene_id=NA19317_ch_G0000047;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=NA19317_ch_G0000047;Name=LOC107987342
NA19317_chrY	CAT	transcript	5967620	5970927	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_G0000047;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=NA19317_ch_T0000186;Name=LOC107987342
NA19317_chrY	CAT	exon	5967620	5967768	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_T0000186;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19317_ch_T0000186:0;Name=LOC107987342;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5967769	5970299	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_T0000186;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:NA19317_ch_T0000186:0;Name=LOC107987342;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5970300	5970372	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_T0000186;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19317_ch_T0000186:1;Name=LOC107987342;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5970373	5970748	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_T0000186;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:NA19317_ch_T0000186:1;Name=LOC107987342;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5970749	5970927	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=NA19317_ch_T0000186;gene_id=NA19317_ch_G0000047;Parent=NA19317_ch_T0000186;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:NA19317_ch_T0000186:2;Name=LOC107987342;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	5991398	6012561	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=NA19317_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=NA19317_ch_G0000048;Name=TTTY1
NA19317_chrY	CAT	transcript	5991398	6012561	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_G0000048;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=NA19317_ch_T0000187;Name=TTTY1
NA19317_chrY	CAT	exon	5991398	5991672	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19317_ch_T0000187:0;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5991673	5995096	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19317_ch_T0000187:0;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	5995097	5995256	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19317_ch_T0000187:1;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	5995257	6002119	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19317_ch_T0000187:1;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6002120	6002228	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19317_ch_T0000187:2;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6002229	6004584	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19317_ch_T0000187:2;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6004585	6004722	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19317_ch_T0000187:3;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6004723	6012303	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:NA19317_ch_T0000187:3;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6012304	6012561	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=NA19317_ch_T0000187;gene_id=NA19317_ch_G0000048;Parent=NA19317_ch_T0000187;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:NA19317_ch_T0000187:4;Name=TTTY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6007241	6029441	.	-	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=NA19317_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=NA19317_ch_G0000049;Name=TTTY2B
NA19317_chrY	CAT	transcript	6007241	6029441	1000	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_G0000049;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=NA19317_ch_T0000188;Name=TTTY2B
NA19317_chrY	CAT	exon	6007241	6007920	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:0;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6007921	6009143	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:0;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6009144	6009341	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:1;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6009342	6009461	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:1;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6009462	6009540	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:2;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6009541	6012370	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:2;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6012371	6012527	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:3;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6012528	6013219	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:3;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6013220	6013368	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:4;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6013369	6020762	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:4;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6020763	6020849	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:5;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6020850	6023325	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:5;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6023326	6023403	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:6;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6023404	6029236	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:NA19317_ch_T0000188:6;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6029237	6029441	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=NA19317_ch_T0000188;gene_id=NA19317_ch_G0000049;Parent=NA19317_ch_T0000188;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:NA19317_ch_T0000188:7;Name=TTTY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6044431	6048074	.	+	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=NA19317_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=NA19317_ch_G0000050;Name=TTTY21B
NA19317_chrY	CAT	transcript	6044431	6048074	1000	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=NA19317_ch_T0000189;gene_id=NA19317_ch_G0000050;Parent=NA19317_ch_G0000050;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=NA19317_ch_T0000189;Name=TTTY21B
NA19317_chrY	CAT	exon	6044431	6044632	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=NA19317_ch_T0000189;gene_id=NA19317_ch_G0000050;Parent=NA19317_ch_T0000189;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:NA19317_ch_T0000189:0;Name=TTTY21B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6044633	6047969	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=NA19317_ch_T0000189;gene_id=NA19317_ch_G0000050;Parent=NA19317_ch_T0000189;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:NA19317_ch_T0000189:0;Name=TTTY21B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6047970	6048074	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=NA19317_ch_T0000189;gene_id=NA19317_ch_G0000050;Parent=NA19317_ch_T0000189;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:NA19317_ch_T0000189:1;Name=TTTY21B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6050465	6058903	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=NA19317_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=NA19317_ch_G0000051;Name=TTTY7
NA19317_chrY	CAT	transcript	6050465	6058903	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_G0000051;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=NA19317_ch_T0000190;Name=TTTY7
NA19317_chrY	CAT	exon	6050465	6050501	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:0;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6050502	6051442	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:0;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6051443	6051604	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:1;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6051605	6053911	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:1;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6053912	6053986	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:2;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6053987	6054674	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:2;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6054675	6055151	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:3;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6055152	6057068	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:3;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6057069	6057182	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:4;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6057183	6058155	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:4;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6058156	6058411	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:5;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6058412	6058657	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:NA19317_ch_T0000190:5;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6058658	6058903	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=NA19317_ch_T0000190;gene_id=NA19317_ch_G0000051;Parent=NA19317_ch_T0000190;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:NA19317_ch_T0000190:6;Name=TTTY7;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6072023	6074622	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=NA19317_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=NA19317_ch_G0000052;Name=TTTY8B
NA19317_chrY	CAT	transcript	6072023	6074622	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_G0000052;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=NA19317_ch_T0000191;Name=TTTY8B
NA19317_chrY	CAT	exon	6072023	6072212	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_T0000191;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19317_ch_T0000191:0;Name=TTTY8B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6072213	6073804	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_T0000191;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:NA19317_ch_T0000191:0;Name=TTTY8B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6073805	6074009	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_T0000191;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19317_ch_T0000191:1;Name=TTTY8B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6074010	6074486	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_T0000191;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:NA19317_ch_T0000191:1;Name=TTTY8B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6074487	6074622	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=NA19317_ch_T0000191;gene_id=NA19317_ch_G0000052;Parent=NA19317_ch_T0000191;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:NA19317_ch_T0000191:2;Name=TTTY8B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6451146	6496989	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=NA19317_ch_G0000053;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000053;Name=AMELY
NA19317_chrY	CAT	transcript	6451146	6459255	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=NA19317_ch_T0000192;Name=AMELY
NA19317_chrY	CAT	exon	6451146	6451306	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6451301	6451306	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6451301	6451303	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:NA19317_ch_T0000192;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6451307	6453264	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6453265	6453690	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6453265	6453690	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6453691	6453959	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6453960	6454004	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6453960	6454004	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6454005	6454095	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6454096	6454137	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6454096	6454137	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6454138	6455233	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6455234	6455281	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6455234	6455281	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6455282	6457782	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6457783	6457848	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:5;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6457783	6457836	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000192:5;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6457834	6457836	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:NA19317_ch_T0000192;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6457849	6459199	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000192:5;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6459200	6459255	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000192;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000192;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000192:6;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6451146	6496989	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=NA19317_ch_T0000193;Name=AMELY
NA19317_chrY	CAT	exon	6451146	6451306	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6451301	6451306	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000193:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6451301	6451303	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:NA19317_ch_T0000193;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6451307	6453264	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:0;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6453265	6453690	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6453265	6453690	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000193:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6453691	6453959	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:1;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6453960	6454004	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6453960	6454004	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000193:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6454005	6455233	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:2;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6455234	6455281	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6455234	6455281	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000193:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6455282	6457782	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:3;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6457783	6457848	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6457783	6457836	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:NA19317_ch_T0000193:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6457834	6457836	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:NA19317_ch_T0000193;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6457849	6459199	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:4;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6459200	6459299	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:5;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6459300	6496909	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:NA19317_ch_T0000193:5;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6496910	6496989	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000193;gene_id=NA19317_ch_G0000053;Parent=NA19317_ch_T0000193;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:NA19317_ch_T0000193:6;Name=AMELY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6495102	6690906	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=NA19317_ch_G0000054;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000054;Name=TBL1Y
NA19317_chrY	CAT	transcript	6495102	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000194;Name=TBL1Y
NA19317_chrY	CAT	exon	6495102	6495340	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6495341	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6581030	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6581031	6581125	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6581126	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6686002	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000194:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6686003	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000194:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6686003	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000194:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6686186	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000194;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000195;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6581030	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6581031	6581125	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6581126	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6686002	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000195:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6686003	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000195:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6686003	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000195:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6686186	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000195;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000195;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000195;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000196;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6686002	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000196:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6686003	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000196:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6686003	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000196:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6686186	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000196;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000196;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000196;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6676901	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000197;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6581030	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6581031	6581125	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6581126	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6676689	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000197:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6676690	6676901	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000197:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6676690	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000197:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6676708	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000197;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000197;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000197;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6676901	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000198;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6581030	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6581031	6581125	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6581126	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6676689	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000198:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6676690	6676901	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000198:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6676690	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000198:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6676708	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000198;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000198;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000198;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6676901	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000199;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6676689	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000199:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6676690	6676901	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000199:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6676690	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000199:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6676708	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000199;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000199;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000199;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6676901	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000200;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000200;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6676689	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000200:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6676690	6676901	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000200:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6676690	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000200:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6676708	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000200;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000200;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000200;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000201;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000201;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6686002	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000201:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6686003	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000201:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6686003	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000201:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6686186	6686188	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000201;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000201;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000201;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000202;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000202;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6686002	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:16;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6686003	6686068	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6686003	6686068	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6686069	6690615	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000202:17;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6690616	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000202:18;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6690616	6690624	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000202:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6690622	6690624	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000202;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000202;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000202;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000203;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6497324	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6497325	6497409	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6497410	6563436	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6563437	6563467	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6563468	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000203;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672504	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000203:14;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672505	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000203:15;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672505	6672610	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000203:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6672608	6672610	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000203;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000203;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000203;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6495934	6690906	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000204;Name=TBL1Y
NA19317_chrY	CAT	exon	6495934	6496219	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6496220	6606674	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6606675	6606763	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6606764	6610260	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6610261	6610368	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6610311	6610368	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6610311	6610313	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000204;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6610369	6628204	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6628205	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628205	6628350	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672504	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000204:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672505	6690906	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000204:13;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672505	6672610	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000204:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6672608	6672610	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000204;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000204;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000204;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	6627836	6676901	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=NA19317_ch_T0000205;Name=TBL1Y
NA19317_chrY	CAT	exon	6627836	6628350	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6628105	6628350	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	6628105	6628107	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:NA19317_ch_T0000205;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6628351	6649120	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:0;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6649121	6649373	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6649121	6649373	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6649374	6655419	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:1;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655420	6655552	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655420	6655552	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6655553	6655943	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:2;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6655944	6656085	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6655944	6656085	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656086	6656783	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:3;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656784	6656847	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656784	6656847	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6656848	6656956	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:4;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6656957	6657054	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6656957	6657054	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6657055	6659783	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:5;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6659784	6659844	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6659784	6659844	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6659845	6665951	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:6;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6665952	6666073	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6665952	6666073	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6666074	6671115	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:7;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671116	6671190	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671116	6671190	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671191	6671507	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:8;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6671508	6671635	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6671508	6671635	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6671636	6672484	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:9;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6672485	6672650	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6672485	6672650	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6672651	6675306	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:10;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6675307	6675408	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6675307	6675408	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6675409	6676689	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:NA19317_ch_T0000205:11;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6676690	6676901	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:NA19317_ch_T0000205:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	6676690	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:NA19317_ch_T0000205:12;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	6676708	6676710	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000205;gene_id=NA19317_ch_G0000054;Parent=NA19317_ch_T0000205;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:NA19317_ch_T0000205;Name=TBL1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	6859187	6966759	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=NA19317_ch_G0000055;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=NA19317_ch_G0000055;Name=PRKY
NA19317_chrY	CAT	transcript	6859187	6966759	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_G0000055;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=NA19317_ch_T0000206;Name=PRKY
NA19317_chrY	CAT	exon	6859187	6859693	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:0;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6859694	6889146	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:0;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6889147	6889315	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:1;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6889316	6911116	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:1;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6911117	6911380	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:2;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6911381	6926326	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:2;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6926327	6926446	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:3;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6926447	6941345	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:3;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6941346	6941441	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:4;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6941442	6952566	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:4;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6952567	6952644	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:5;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6952645	6956954	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:5;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6956955	6957101	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:6;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	6957102	6960923	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:NA19317_ch_T0000206:6;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	6960924	6966759	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=NA19317_ch_T0000206;gene_id=NA19317_ch_G0000055;Parent=NA19317_ch_T0000206;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:NA19317_ch_T0000206:7;Name=PRKY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7043824	7105853	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=NA19317_ch_G0000056;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=NA19317_ch_G0000056;Name=LOC107987338
NA19317_chrY	CAT	transcript	7043824	7105853	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_G0000056;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=NA19317_ch_T0000207;Name=LOC107987338
NA19317_chrY	CAT	exon	7043824	7043937	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19317_ch_T0000207:0;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7043938	7086248	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19317_ch_T0000207:0;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7086249	7086407	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19317_ch_T0000207:1;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7086408	7104197	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19317_ch_T0000207:1;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7104198	7104306	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19317_ch_T0000207:2;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7104307	7105337	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:NA19317_ch_T0000207:2;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7105338	7105853	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=NA19317_ch_T0000207;gene_id=NA19317_ch_G0000056;Parent=NA19317_ch_T0000207;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:NA19317_ch_T0000207:3;Name=LOC107987338;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7284779	7286670	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=NA19317_ch_G0000057;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=NA19317_ch_G0000057;Name=TTTY16
NA19317_chrY	CAT	transcript	7284779	7286670	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19317_ch_T0000208;gene_id=NA19317_ch_G0000057;Parent=NA19317_ch_G0000057;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=NA19317_ch_T0000208;Name=TTTY16
NA19317_chrY	CAT	exon	7284779	7284909	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19317_ch_T0000208;gene_id=NA19317_ch_G0000057;Parent=NA19317_ch_T0000208;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:NA19317_ch_T0000208:0;Name=TTTY16;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7284910	7286609	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19317_ch_T0000208;gene_id=NA19317_ch_G0000057;Parent=NA19317_ch_T0000208;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:NA19317_ch_T0000208:0;Name=TTTY16;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7286610	7286670	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=NA19317_ch_T0000208;gene_id=NA19317_ch_G0000057;Parent=NA19317_ch_T0000208;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:NA19317_ch_T0000208:1;Name=TTTY16;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7368185	7398563	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=NA19317_ch_G0000058;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=NA19317_ch_G0000058;Name=LOC107987339
NA19317_chrY	CAT	transcript	7368185	7398563	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_G0000058;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=NA19317_ch_T0000209;Name=LOC107987339
NA19317_chrY	CAT	exon	7368185	7368232	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_T0000209;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19317_ch_T0000209:0;Name=LOC107987339;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7368233	7394187	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_T0000209;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:NA19317_ch_T0000209:0;Name=LOC107987339;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7394188	7394297	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_T0000209;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19317_ch_T0000209:1;Name=LOC107987339;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7394298	7397846	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_T0000209;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:NA19317_ch_T0000209:1;Name=LOC107987339;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7397847	7398563	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=NA19317_ch_T0000209;gene_id=NA19317_ch_G0000058;Parent=NA19317_ch_T0000209;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:NA19317_ch_T0000209:2;Name=LOC107987339;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7392708	7399376	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=NA19317_ch_G0000059;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=NA19317_ch_G0000059;Name=TTTY12
NA19317_chrY	CAT	transcript	7392708	7399376	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=NA19317_ch_T0000210;Name=TTTY12
NA19317_chrY	CAT	exon	7392708	7392755	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000210;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000210:0;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7392756	7393616	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000210;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19317_ch_T0000210:0;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7393617	7393772	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000210;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000210:1;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7393773	7398553	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000210;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19317_ch_T0000210:1;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7398554	7399376	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=NA19317_ch_T0000210;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000210;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000210:2;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	7392708	7399376	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=NA19317_ch_T0000211;Name=TTTY12
NA19317_chrY	CAT	exon	7392708	7392755	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000211:0;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7392756	7393616	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19317_ch_T0000211:0;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7393617	7393772	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000211:1;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7393773	7394236	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19317_ch_T0000211:1;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7394237	7394318	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000211:2;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7394319	7398553	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:NA19317_ch_T0000211:2;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7398554	7399376	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=NA19317_ch_T0000211;gene_id=NA19317_ch_G0000059;Parent=NA19317_ch_T0000211;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:NA19317_ch_T0000211:3;Name=TTTY12;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7419508	7447458	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=NA19317_ch_G0000060;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=NA19317_ch_G0000060;Name=LOC105377229
NA19317_chrY	CAT	transcript	7419508	7447458	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_G0000060;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=NA19317_ch_T0000212;Name=LOC105377229
NA19317_chrY	CAT	exon	7419508	7420783	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19317_ch_T0000212:0;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7420784	7420930	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19317_ch_T0000212:0;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7420931	7421102	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19317_ch_T0000212:1;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7421103	7421670	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19317_ch_T0000212:1;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7421671	7421795	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19317_ch_T0000212:2;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7421796	7447389	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:NA19317_ch_T0000212:2;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7447390	7447458	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=NA19317_ch_T0000212;gene_id=NA19317_ch_G0000060;Parent=NA19317_ch_T0000212;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:NA19317_ch_T0000212:3;Name=LOC105377229;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	7983750	7996017	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=NA19317_ch_G0000061;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=NA19317_ch_G0000061;Name=LOC105377231
NA19317_chrY	CAT	transcript	7983750	7996017	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=NA19317_ch_T0000213;Name=LOC105377231
NA19317_chrY	CAT	exon	7983750	7983835	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000213:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7983836	7991429	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000213:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7991430	7991683	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000213:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7991684	7992384	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000213:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7992385	7992537	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000213:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7992538	7995829	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000213:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7995830	7996017	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=NA19317_ch_T0000213;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000213;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000213:3;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	7983750	7996017	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=NA19317_ch_T0000214;Name=LOC105377231
NA19317_chrY	CAT	exon	7983750	7983835	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000214:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7983836	7991429	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000214:0;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7991430	7991673	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000214:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7991674	7992384	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000214:1;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7992385	7992537	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000214:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	7992538	7995829	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:NA19317_ch_T0000214:2;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	7995830	7996017	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=NA19317_ch_T0000214;gene_id=NA19317_ch_G0000061;Parent=NA19317_ch_T0000214;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:NA19317_ch_T0000214:3;Name=LOC105377231;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8137744	8139955	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=NA19317_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=NA19317_ch_G0000062;Name=LOC105377232
NA19317_chrY	CAT	transcript	8137744	8139955	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_G0000062;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=NA19317_ch_T0000215;Name=LOC105377232
NA19317_chrY	CAT	exon	8137744	8137758	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_T0000215;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19317_ch_T0000215:0;Name=LOC105377232;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8137759	8138444	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_T0000215;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:NA19317_ch_T0000215:0;Name=LOC105377232;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8138445	8138519	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_T0000215;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19317_ch_T0000215:1;Name=LOC105377232;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8138520	8139941	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_T0000215;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:NA19317_ch_T0000215:1;Name=LOC105377232;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8139942	8139955	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=NA19317_ch_T0000215;gene_id=NA19317_ch_G0000062;Parent=NA19317_ch_T0000215;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:NA19317_ch_T0000215:2;Name=LOC105377232;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8149433	8150919	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=NA19317_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=NA19317_ch_G0000063;Name=LOC107987354
NA19317_chrY	CAT	transcript	8149433	8150919	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_G0000063;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=NA19317_ch_T0000216;Name=LOC107987354
NA19317_chrY	CAT	exon	8149433	8149591	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_T0000216;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19317_ch_T0000216:0;Name=LOC107987354;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8149592	8149742	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_T0000216;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:NA19317_ch_T0000216:0;Name=LOC107987354;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8149743	8149817	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_T0000216;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19317_ch_T0000216:1;Name=LOC107987354;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8149818	8150781	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_T0000216;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:NA19317_ch_T0000216:1;Name=LOC107987354;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8150782	8150919	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=NA19317_ch_T0000216;gene_id=NA19317_ch_G0000063;Parent=NA19317_ch_T0000216;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:NA19317_ch_T0000216:2;Name=LOC107987354;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8227199	8234034	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=NA19317_ch_G0000064;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=NA19317_ch_G0000064;Name=LINC00279
NA19317_chrY	CAT	transcript	8227199	8234034	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_G0000064;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=NA19317_ch_T0000217;Name=LINC00279
NA19317_chrY	CAT	exon	8227199	8227311	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19317_ch_T0000217:0;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8227312	8233036	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19317_ch_T0000217:0;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8233037	8233232	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19317_ch_T0000217:1;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8233233	8233583	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19317_ch_T0000217:1;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8233584	8233826	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19317_ch_T0000217:2;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8233827	8233958	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:NA19317_ch_T0000217:2;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8233959	8234034	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=NA19317_ch_T0000217;gene_id=NA19317_ch_G0000064;Parent=NA19317_ch_T0000217;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:NA19317_ch_T0000217:3;Name=LINC00279;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8248946	8249787	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=NA19317_ch_G0000065;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=NA19317_ch_G0000065;Name=LOC107987340
NA19317_chrY	CAT	transcript	8248946	8249787	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19317_ch_T0000218;gene_id=NA19317_ch_G0000065;Parent=NA19317_ch_G0000065;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=NA19317_ch_T0000218;Name=LOC107987340
NA19317_chrY	CAT	exon	8248946	8249067	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19317_ch_T0000218;gene_id=NA19317_ch_G0000065;Parent=NA19317_ch_T0000218;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:NA19317_ch_T0000218:0;Name=LOC107987340;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8249068	8249402	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19317_ch_T0000218;gene_id=NA19317_ch_G0000065;Parent=NA19317_ch_T0000218;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:NA19317_ch_T0000218:0;Name=LOC107987340;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8249403	8249787	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=NA19317_ch_T0000218;gene_id=NA19317_ch_G0000065;Parent=NA19317_ch_T0000218;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:NA19317_ch_T0000218:1;Name=LOC107987340;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8272275	8272783	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=NA19317_ch_G0000066;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=NA19317_ch_G0000066;Name=TTTY18
NA19317_chrY	CAT	transcript	8272275	8272783	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19317_ch_T0000219;gene_id=NA19317_ch_G0000066;Parent=NA19317_ch_G0000066;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=NA19317_ch_T0000219;Name=TTTY18
NA19317_chrY	CAT	exon	8272275	8272337	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19317_ch_T0000219;gene_id=NA19317_ch_G0000066;Parent=NA19317_ch_T0000219;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:NA19317_ch_T0000219:0;Name=TTTY18;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8272338	8272625	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19317_ch_T0000219;gene_id=NA19317_ch_G0000066;Parent=NA19317_ch_T0000219;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:NA19317_ch_T0000219:0;Name=TTTY18;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8272626	8272783	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=NA19317_ch_T0000219;gene_id=NA19317_ch_G0000066;Parent=NA19317_ch_T0000219;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:NA19317_ch_T0000219:1;Name=TTTY18;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8282802	8284223	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=NA19317_ch_G0000067;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=NA19317_ch_G0000067;Name=LOC105377234
NA19317_chrY	CAT	transcript	8282802	8284223	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_G0000067;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=NA19317_ch_T0000220;Name=LOC105377234
NA19317_chrY	CAT	exon	8282802	8282888	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_T0000220;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19317_ch_T0000220:0;Name=LOC105377234;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8282889	8283372	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_T0000220;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:NA19317_ch_T0000220:0;Name=LOC105377234;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8283373	8283450	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_T0000220;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19317_ch_T0000220:1;Name=LOC105377234;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8283451	8284031	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_T0000220;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:NA19317_ch_T0000220:1;Name=LOC105377234;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8284032	8284223	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=NA19317_ch_T0000220;gene_id=NA19317_ch_G0000067;Parent=NA19317_ch_T0000220;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:NA19317_ch_T0000220:2;Name=LOC105377234;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8293397	8294208	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=NA19317_ch_G0000068;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=NA19317_ch_G0000068;Name=TTTY19
NA19317_chrY	CAT	transcript	8293397	8294208	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19317_ch_T0000221;gene_id=NA19317_ch_G0000068;Parent=NA19317_ch_G0000068;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=NA19317_ch_T0000221;Name=TTTY19
NA19317_chrY	CAT	exon	8293397	8293484	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19317_ch_T0000221;gene_id=NA19317_ch_G0000068;Parent=NA19317_ch_T0000221;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:NA19317_ch_T0000221:0;Name=TTTY19;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8293485	8294027	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19317_ch_T0000221;gene_id=NA19317_ch_G0000068;Parent=NA19317_ch_T0000221;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:NA19317_ch_T0000221:0;Name=TTTY19;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8294028	8294208	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=NA19317_ch_T0000221;gene_id=NA19317_ch_G0000068;Parent=NA19317_ch_T0000221;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:NA19317_ch_T0000221:1;Name=TTTY19;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8310731	8313216	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=NA19317_ch_G0000069;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=NA19317_ch_G0000069;Name=LOC105377235
NA19317_chrY	CAT	transcript	8310731	8313216	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_G0000069;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=NA19317_ch_T0000222;Name=LOC105377235
NA19317_chrY	CAT	exon	8310731	8311014	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19317_ch_T0000222:0;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8311015	8311111	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19317_ch_T0000222:0;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8311112	8311207	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19317_ch_T0000222:1;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8311208	8311297	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19317_ch_T0000222:1;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8311298	8311560	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19317_ch_T0000222:2;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8311561	8313028	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:NA19317_ch_T0000222:2;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8313029	8313216	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=NA19317_ch_T0000222;gene_id=NA19317_ch_G0000069;Parent=NA19317_ch_T0000222;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:NA19317_ch_T0000222:3;Name=LOC105377235;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8372250	8406318	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=NA19317_ch_G0000070;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=NA19317_ch_G0000070;Name=TTTY11
NA19317_chrY	CAT	transcript	8372250	8406318	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_G0000070;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=NA19317_ch_T0000223;Name=TTTY11
NA19317_chrY	CAT	exon	8372250	8372343	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19317_ch_T0000223:0;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8372344	8372824	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19317_ch_T0000223:0;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8372825	8373140	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19317_ch_T0000223:1;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8373141	8377936	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19317_ch_T0000223:1;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8377937	8378239	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19317_ch_T0000223:2;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8378240	8383797	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19317_ch_T0000223:2;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8383798	8383881	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19317_ch_T0000223:3;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8383882	8406281	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:NA19317_ch_T0000223:3;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8406282	8406318	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=NA19317_ch_T0000223;gene_id=NA19317_ch_G0000070;Parent=NA19317_ch_T0000223;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:NA19317_ch_T0000223:4;Name=TTTY11;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8803928	8808792	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=NA19317_ch_G0000071;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=NA19317_ch_G0000071;Name=LOC105379264
NA19317_chrY	CAT	transcript	8803928	8808792	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_G0000071;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=NA19317_ch_T0000224;Name=LOC105379264
NA19317_chrY	CAT	exon	8803928	8804002	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19317_ch_T0000224:0;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8804003	8804156	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19317_ch_T0000224:0;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8804157	8804261	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19317_ch_T0000224:1;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8804262	8806323	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19317_ch_T0000224:1;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8806324	8806399	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19317_ch_T0000224:2;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8806400	8808708	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:NA19317_ch_T0000224:2;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8808709	8808792	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=NA19317_ch_T0000224;gene_id=NA19317_ch_G0000071;Parent=NA19317_ch_T0000224;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:NA19317_ch_T0000224:3;Name=LOC105379264;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8813481	8822027	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=NA19317_ch_G0000072;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=NA19317_ch_G0000072;Name=LOC105379265
NA19317_chrY	CAT	transcript	8813481	8822027	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_G0000072;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=NA19317_ch_T0000225;Name=LOC105379265
NA19317_chrY	CAT	exon	8813481	8814036	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19317_ch_T0000225:0;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8814037	8815144	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19317_ch_T0000225:0;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8815145	8815286	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19317_ch_T0000225:1;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8815287	8817430	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19317_ch_T0000225:1;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8817431	8817517	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19317_ch_T0000225:2;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8817518	8821898	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:NA19317_ch_T0000225:2;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8821899	8822027	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=NA19317_ch_T0000225;gene_id=NA19317_ch_G0000072;Parent=NA19317_ch_T0000225;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:NA19317_ch_T0000225:3;Name=LOC105379265;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8828061	8830312	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=NA19317_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=NA19317_ch_G0000073;Name=LOC105379266
NA19317_chrY	CAT	transcript	8828061	8830312	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000226;gene_id=NA19317_ch_G0000073;Parent=NA19317_ch_G0000073;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=NA19317_ch_T0000226;Name=LOC105379266
NA19317_chrY	CAT	exon	8828061	8828345	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000226;gene_id=NA19317_ch_G0000073;Parent=NA19317_ch_T0000226;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:NA19317_ch_T0000226:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8828346	8829030	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000226;gene_id=NA19317_ch_G0000073;Parent=NA19317_ch_T0000226;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:NA19317_ch_T0000226:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8829031	8830312	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000226;gene_id=NA19317_ch_G0000073;Parent=NA19317_ch_T0000226;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:NA19317_ch_T0000226:1;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8831468	8843698	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=NA19317_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=NA19317_ch_G0000074;Name=LOC105379267
NA19317_chrY	CAT	transcript	8831468	8843698	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_G0000074;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=NA19317_ch_T0000227;Name=LOC105379267
NA19317_chrY	CAT	exon	8831468	8831639	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_T0000227;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19317_ch_T0000227:0;Name=LOC105379267;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8831640	8832884	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_T0000227;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:NA19317_ch_T0000227:0;Name=LOC105379267;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8832885	8832959	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_T0000227;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19317_ch_T0000227:1;Name=LOC105379267;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8832960	8843627	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_T0000227;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:NA19317_ch_T0000227:1;Name=LOC105379267;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8843628	8843698	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=NA19317_ch_T0000227;gene_id=NA19317_ch_G0000074;Parent=NA19317_ch_T0000227;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:NA19317_ch_T0000227:2;Name=LOC105379267;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8856146	8861959	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=NA19317_ch_G0000075;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=NA19317_ch_G0000075;Name=RBMY1A3P
NA19317_chrY	CAT	transcript	8856146	8861959	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_G0000075;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=NA19317_ch_T0000228;Name=RBMY1A3P
NA19317_chrY	CAT	exon	8856146	8856176	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19317_ch_T0000228:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8856177	8858076	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19317_ch_T0000228:0;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8858077	8858254	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19317_ch_T0000228:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8858255	8861269	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19317_ch_T0000228:1;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8861270	8861373	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19317_ch_T0000228:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8861374	8861845	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:NA19317_ch_T0000228:2;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8861846	8861959	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=NA19317_ch_T0000228;gene_id=NA19317_ch_G0000075;Parent=NA19317_ch_T0000228;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:NA19317_ch_T0000228:3;Name=RBMY1A3P;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8868965	8873917	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=NA19317_ch_G0000076;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=NA19317_ch_G0000076;Name=TTTY20
NA19317_chrY	CAT	transcript	8868965	8873917	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19317_ch_T0000229;gene_id=NA19317_ch_G0000076;Parent=NA19317_ch_G0000076;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=NA19317_ch_T0000229;Name=TTTY20
NA19317_chrY	CAT	exon	8868965	8869141	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19317_ch_T0000229;gene_id=NA19317_ch_G0000076;Parent=NA19317_ch_T0000229;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:NA19317_ch_T0000229:0;Name=TTTY20;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8869142	8873835	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19317_ch_T0000229;gene_id=NA19317_ch_G0000076;Parent=NA19317_ch_T0000229;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:NA19317_ch_T0000229:0;Name=TTTY20;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8873836	8873917	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=NA19317_ch_T0000229;gene_id=NA19317_ch_G0000076;Parent=NA19317_ch_T0000229;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:NA19317_ch_T0000229:1;Name=TTTY20;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8876549	8879345	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=NA19317_ch_G0000077;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000077;Name=TSPY10
NA19317_chrY	CAT	transcript	8876549	8879345	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=NA19317_ch_T0000230;Name=TSPY10
NA19317_chrY	CAT	exon	8876549	8877080	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8876595	8877080	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8876595	8876597	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877081	8877687	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877688	8877765	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877688	8877765	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877766	8877893	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877894	8878005	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877894	8878005	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878006	8878106	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878107	8878252	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878107	8878252	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878253	8878358	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878359	8878440	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878359	8878440	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878441	8879134	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8879135	8879345	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8879135	8879157	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8879155	8879157	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=NA19317_ch_T0000230;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000230;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8876549	8879345	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=NA19317_ch_T0000231;Name=TSPY10
NA19317_chrY	CAT	exon	8876549	8877080	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8876595	8877080	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8876595	8876597	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877081	8877687	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877688	8877765	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877688	8877765	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877766	8877893	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877894	8878005	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877894	8878005	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878006	8878106	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878107	8878252	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878107	8878252	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878253	8878347	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878348	8878440	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878348	8878410	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8878408	8878410	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878441	8879134	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8879135	8879345	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=NA19317_ch_T0000231;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000231;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000231:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8876549	8879345	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=NA19317_ch_T0000232;Name=TSPY10
NA19317_chrY	CAT	exon	8876549	8877080	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8876595	8877080	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8876595	8876597	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877081	8877687	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877688	8877765	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877688	8877765	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877766	8877893	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877894	8878005	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8877894	8878005	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878006	8878113	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878114	8878252	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878114	8878252	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878253	8878358	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878359	8878440	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8878359	8878410	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8878408	8878410	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878441	8879134	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8879135	8879345	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=NA19317_ch_T0000232;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000232;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000232:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8876549	8879345	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_G0000077;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=NA19317_ch_T0000233;Name=TSPY10
NA19317_chrY	CAT	exon	8876549	8877080	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877081	8877687	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877688	8877765	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8877766	8877893	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8877894	8878005	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878006	8878113	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878114	8878252	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878253	8878347	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8878348	8878440	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8878441	8879134	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8879135	8879345	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=NA19317_ch_T0000233;gene_id=NA19317_ch_G0000077;Parent=NA19317_ch_T0000233;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000233:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8888645	8894246	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;gene_id=NA19317_ch_G0000078;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000078;Name=FAM197Y3
NA19317_chrY	CAT	transcript	8888645	8894246	1000	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_G0000078;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000234;Name=FAM197Y3
NA19317_chrY	CAT	exon	8888645	8888704	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000234:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8888705	8892255	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000234:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8892256	8892414	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000234:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8892415	8893912	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000234:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8893913	8894058	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000234:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8894059	8894144	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000234:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8894145	8894246	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000234;gene_id=NA19317_ch_G0000078;Parent=NA19317_ch_T0000234;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000234:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8896860	8899674	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;gene_id=NA19317_ch_G0000079;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19317_ch_G0000079;Name=TSPY4
NA19317_chrY	CAT	transcript	8896860	8899674	100	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_G0000079;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=NA19317_ch_T0000235;Name=TSPY4
NA19317_chrY	CAT	exon	8896860	8897409	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8896906	8897409	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8896906	8896908	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8897410	8898016	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898017	8898094	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898017	8898094	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898095	8898222	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898223	8898334	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898223	8898334	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898335	8898435	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898436	8898581	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898436	8898581	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898582	8898687	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898688	8898769	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898688	8898769	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898770	8899463	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8899464	8899674	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000235:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8899464	8899486	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000235:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8899484	8899486	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_156.1;transcript_id=NA19317_ch_T0000235;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000235;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000235;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8896860	8899674	100	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_G0000079;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=NA19317_ch_T0000236;Name=TSPY4
NA19317_chrY	CAT	exon	8896860	8897409	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8896906	8897409	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8896906	8896908	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8897410	8898016	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000236:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898017	8898094	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898017	8898094	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898095	8898222	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000236:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898223	8898334	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898223	8898334	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898335	8898435	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000236:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898436	8898581	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898436	8898581	.	+	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898582	8898676	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000236:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898677	8898769	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898677	8898739	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8898737	8898739	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000236;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898770	8899463	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000236:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8899464	8899674	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_156.2;transcript_id=NA19317_ch_T0000236;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000236;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000236:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8896860	8899674	100	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_G0000079;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=NA19317_ch_T0000237;Name=TSPY4
NA19317_chrY	CAT	exon	8896860	8897409	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8896906	8897409	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8896906	8896908	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000237;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8897410	8898016	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898017	8898094	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898017	8898094	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898095	8898222	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898223	8898334	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898223	8898334	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898335	8898442	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898443	8898581	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898443	8898581	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898582	8898687	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898688	8898769	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8898688	8898739	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8898737	8898739	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000237;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898770	8899463	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8899464	8899674	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_156.3;transcript_id=NA19317_ch_T0000237;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000237;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000237:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8896860	8899674	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_G0000079;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=NA19317_ch_T0000238;Name=TSPY4
NA19317_chrY	CAT	exon	8896860	8897409	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8897410	8898016	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000238:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898017	8898094	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898095	8898222	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000238:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898223	8898334	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898335	8898442	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000238:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898443	8898581	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898582	8898676	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000238:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8898677	8898769	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8898770	8899463	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000238:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8899464	8899674	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_156.4;transcript_id=NA19317_ch_T0000238;gene_id=NA19317_ch_G0000079;Parent=NA19317_ch_T0000238;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000238:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8908944	8914539	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;alternative_source_transcripts=hg002_chrY_paternal_155.1;gene_id=NA19317_ch_G0000080;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=NA19317_ch_G0000080;Name=FAM197Y7
NA19317_chrY	CAT	transcript	8908944	8914539	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_G0000080;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=NA19317_ch_T0000239;Name=FAM197Y7
NA19317_chrY	CAT	exon	8908944	8909003	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:NA19317_ch_T0000239:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8909004	8912553	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:NA19317_ch_T0000239:0;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8912554	8912712	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:NA19317_ch_T0000239:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8912713	8914205	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:NA19317_ch_T0000239:1;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8914206	8914351	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:NA19317_ch_T0000239:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8914352	8914437	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:NA19317_ch_T0000239:2;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8914438	8914539	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_155.1;transcript_id=NA19317_ch_T0000239;gene_id=NA19317_ch_G0000080;Parent=NA19317_ch_T0000239;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:NA19317_ch_T0000239:3;Name=FAM197Y7;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8929242	8934936	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_213;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;gene_id=NA19317_ch_G0000081;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000081;Name=FAM197Y2
NA19317_chrY	CAT	transcript	8929242	8934936	1000	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_G0000081;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000240;Name=FAM197Y2
NA19317_chrY	CAT	exon	8929242	8929301	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000240:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8929302	8932850	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000240:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8932851	8933009	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000240:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8933010	8934513	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000240:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8934514	8934659	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000240:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8934660	8934745	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000240:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8934746	8934936	.	-	.	source_transcript=hg002_chrY_paternal_213.1;source_transcript_name=hg002_chrY_paternal_213.1;source_gene=hg002_chrY_paternal_213;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_213;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_213.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000240;gene_id=NA19317_ch_G0000081;Parent=NA19317_ch_T0000240;transcript_name=hg002_chrY_paternal_213.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000240:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8937460	8940274	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;gene_id=NA19317_ch_G0000082;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=NA19317_ch_G0000082;Name=TSPY1
NA19317_chrY	CAT	transcript	8937460	8940274	10000	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_G0000082;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19317_ch_T0000241;Name=TSPY1
NA19317_chrY	CAT	exon	8937460	8937592	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8937506	8937592	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8937506	8937508	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8937593	8937871	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8937872	8938009	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8937872	8938009	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8938010	8938616	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8938617	8938694	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8938617	8938694	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8938695	8938822	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8938823	8938934	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8938823	8938934	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8938935	8939035	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8939036	8939181	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8939036	8939181	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8939182	8939287	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8939288	8939369	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8939288	8939369	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8939370	8940063	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000241:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8940064	8940274	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000241:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8940064	8940086	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000241:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8940084	8940086	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000241;gene_id=NA19317_ch_G0000082;Parent=NA19317_ch_T0000241;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000241;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8949577	8955268	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_183;alternative_source_transcripts=hg002_chrY_paternal_159.1;gene_id=NA19317_ch_G0000083;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000083;Name=FAM197Y2
NA19317_chrY	CAT	transcript	8949577	8955268	1000	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_G0000083;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000242;Name=FAM197Y2
NA19317_chrY	CAT	exon	8949577	8949636	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000242:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8949637	8953186	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000242:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8953187	8953345	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000242:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8953346	8954845	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000242:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8954846	8954991	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000242:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8954992	8955077	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000242:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8955078	8955268	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1;transcript_id=NA19317_ch_T0000242;gene_id=NA19317_ch_G0000083;Parent=NA19317_ch_T0000242;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000242:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8957792	8960606	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_164;gene_id=NA19317_ch_G0000084;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=NA19317_ch_G0000084;Name=TSPY3
NA19317_chrY	CAT	transcript	8957792	8960606	9890	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_G0000084;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19317_ch_T0000243;Name=TSPY3
NA19317_chrY	CAT	exon	8957792	8958341	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8957838	8958341	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000243:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8957838	8957840	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000243;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8958342	8958948	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000243:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8958949	8959026	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8958949	8959026	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000243:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959027	8959154	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000243:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959155	8959266	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8959155	8959266	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000243:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959267	8959374	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000243:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959375	8959513	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8959375	8959513	.	+	2	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000243:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959514	8959619	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000243:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959620	8959701	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8959620	8959671	.	+	1	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000243:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8959669	8959671	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000243;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959702	8960395	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000243:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8960396	8960606	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000243;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000243;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000243:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8957792	8960606	1000	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_G0000084;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=NA19317_ch_T0000244;Name=TSPY3
NA19317_chrY	CAT	exon	8957792	8958341	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8958342	8958948	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000244:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8958949	8959026	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959027	8959154	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000244:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959155	8959266	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959267	8959374	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000244:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959375	8959513	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959514	8959608	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000244:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8959609	8959701	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8959702	8960395	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000244:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8960396	8960606	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000244;gene_id=NA19317_ch_G0000084;Parent=NA19317_ch_T0000244;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000244:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8969901	8975587	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;gene_id=NA19317_ch_G0000085;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000085;Name=FAM197Y2
NA19317_chrY	CAT	transcript	8969901	8975587	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_G0000085;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000245;Name=FAM197Y2
NA19317_chrY	CAT	exon	8969901	8969960	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000245:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8969961	8973509	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000245:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8973510	8973668	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000245:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8973669	8975164	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000245:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8975165	8975310	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000245:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8975311	8975396	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000245:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8975397	8975587	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_165.1,hg002_chrY_paternal_163.1;transcript_id=NA19317_ch_T0000245;gene_id=NA19317_ch_G0000085;Parent=NA19317_ch_T0000245;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000245:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8978111	8980907	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_164;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;gene_id=NA19317_ch_G0000086;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000086;Name=TSPY3
NA19317_chrY	CAT	transcript	8978111	8980907	100	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19317_ch_T0000246;Name=TSPY3
NA19317_chrY	CAT	exon	8978111	8978642	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8978157	8978642	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8978157	8978159	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000246;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8978643	8979249	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000246:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979250	8979327	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979250	8979327	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979328	8979455	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000246:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979456	8979567	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979456	8979567	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979568	8979668	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000246:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979669	8979814	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979669	8979814	.	+	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979815	8979920	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000246:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979921	8980002	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979921	8980002	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8980003	8980696	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000246:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8980697	8980907	.	+	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000246:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8980697	8980719	.	+	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000246:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8980717	8980719	.	+	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.1,hg002_chrY_paternal_164.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000246;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000246;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000246;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8978111	8980907	100	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19317_ch_T0000247;Name=TSPY3
NA19317_chrY	CAT	exon	8978111	8978642	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8978157	8978642	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000247:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8978157	8978159	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000247;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8978643	8979249	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000247:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979250	8979327	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979250	8979327	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000247:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979328	8979455	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000247:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979456	8979567	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979456	8979567	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000247:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979568	8979668	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000247:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979669	8979814	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979669	8979814	.	+	2	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000247:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979815	8979909	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000247:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979910	8980002	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979910	8979972	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000247:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8979970	8979972	.	+	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000247;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8980003	8980696	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000247:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8980697	8980907	.	+	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.2,hg002_chrY_paternal_164.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000247;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000247;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000247:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8978111	8980907	100	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_G0000086;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=NA19317_ch_T0000248;Name=TSPY3
NA19317_chrY	CAT	exon	8978111	8978642	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8978157	8978642	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000248:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8978157	8978159	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000248;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8978643	8979249	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000248:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979250	8979327	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979250	8979327	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000248:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979328	8979455	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000248:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979456	8979567	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979456	8979567	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000248:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979568	8979675	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000248:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979676	8979814	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979676	8979814	.	+	2	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000248:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979815	8979920	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000248:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979921	8980002	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8979921	8979972	.	+	1	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000248:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	8979970	8979972	.	+	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000248;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8980003	8980696	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000248:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8980697	8980907	.	+	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.3,hg002_chrY_paternal_164.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000248;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000248;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000248:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8978111	8980907	1000	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_G0000086;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=NA19317_ch_T0000249;Name=TSPY3
NA19317_chrY	CAT	exon	8978111	8978642	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8978643	8979249	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000249:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979250	8979327	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979328	8979455	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000249:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979456	8979567	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979568	8979675	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000249:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979676	8979814	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8979815	8979909	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000249:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8979910	8980002	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8980003	8980696	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000249:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8980697	8980907	.	+	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_166.4,hg002_chrY_paternal_164.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000249;gene_id=NA19317_ch_G0000086;Parent=NA19317_ch_T0000249;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000249:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8990172	8995781	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;gene_id=NA19317_ch_G0000087;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000087;Name=FAM197Y3
NA19317_chrY	CAT	transcript	8990172	8995781	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_G0000087;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000250;Name=FAM197Y3
NA19317_chrY	CAT	exon	8990172	8990231	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000250:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8990232	8993782	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000250:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8993783	8993941	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000250:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8993942	8995447	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000250:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8995448	8995593	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000250:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8995594	8995679	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000250:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8995680	8995781	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_167.1;transcript_id=NA19317_ch_T0000250;gene_id=NA19317_ch_G0000087;Parent=NA19317_ch_T0000250;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000250:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	8998394	9001190	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;gene_id=NA19317_ch_G0000088;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000088;Name=TSPY10
NA19317_chrY	CAT	transcript	8998394	9001190	100	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_G0000088;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19317_ch_T0000251;Name=TSPY10
NA19317_chrY	CAT	exon	8998394	8998925	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8998440	8998925	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8998440	8998442	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000251;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8998926	8999532	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999533	8999610	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999533	8999610	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999611	8999738	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999739	8999850	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999739	8999850	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999851	8999951	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999952	9000097	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999952	9000097	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000098	9000203	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000204	9000285	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9000204	9000285	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000286	9000979	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000980	9001190	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000251:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9000980	9001002	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000251:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9001000	9001002	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_168.1;transcript_id=NA19317_ch_T0000251;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000251;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000251;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8998394	9001190	100	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_G0000088;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19317_ch_T0000252;Name=TSPY10
NA19317_chrY	CAT	exon	8998394	8998925	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8998440	8998925	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8998440	8998442	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000252;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8998926	8999532	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000252:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999533	8999610	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999533	8999610	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999611	8999738	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000252:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999739	8999850	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999739	8999850	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999851	8999951	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000252:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999952	9000097	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999952	9000097	.	+	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000098	9000192	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000252:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000193	9000285	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9000193	9000255	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9000253	9000255	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000252;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000286	9000979	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000252:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000980	9001190	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_168.2;transcript_id=NA19317_ch_T0000252;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000252;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000252:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8998394	9001190	100	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_G0000088;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=NA19317_ch_T0000253;Name=TSPY10
NA19317_chrY	CAT	exon	8998394	8998925	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8998440	8998925	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	8998440	8998442	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8998926	8999532	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999533	8999610	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999533	8999610	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999611	8999738	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999739	8999850	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999739	8999850	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999851	8999958	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999959	9000097	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	8999959	9000097	.	+	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000098	9000203	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000204	9000285	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9000204	9000255	.	+	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9000253	9000255	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000286	9000979	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000980	9001190	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_168.3;transcript_id=NA19317_ch_T0000253;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	8998394	9001190	1000	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_G0000088;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=NA19317_ch_T0000254;Name=TSPY10
NA19317_chrY	CAT	exon	8998394	8998925	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8998926	8999532	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999533	8999610	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999611	8999738	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999739	8999850	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	8999851	8999958	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	8999959	9000097	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000098	9000192	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000193	9000285	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9000286	9000979	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9000980	9001190	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_168.4;transcript_id=NA19317_ch_T0000254;gene_id=NA19317_ch_G0000088;Parent=NA19317_ch_T0000254;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9010462	9016064	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;gene_id=NA19317_ch_G0000089;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000089;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9010462	9016064	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_G0000089;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000255;Name=FAM197Y3
NA19317_chrY	CAT	exon	9010462	9010521	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000255:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9010522	9014069	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000255:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9014070	9014228	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000255:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9014229	9015730	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000255:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9015731	9015876	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000255:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9015877	9015962	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000255:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9015963	9016064	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_169.1;transcript_id=NA19317_ch_T0000255;gene_id=NA19317_ch_G0000089;Parent=NA19317_ch_T0000255;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000255:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9018673	9021469	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_192;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;gene_id=NA19317_ch_G0000090;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000090;Name=TSPY10
NA19317_chrY	CAT	transcript	9018673	9021469	100	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_G0000090;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=NA19317_ch_T0000256;Name=TSPY10
NA19317_chrY	CAT	exon	9018673	9019204	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9018719	9019204	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9018719	9018721	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000256;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019205	9019811	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9019812	9019889	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9019812	9019889	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019890	9020017	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020018	9020129	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020018	9020129	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020130	9020230	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020231	9020376	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020231	9020376	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020377	9020482	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020483	9020564	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020483	9020564	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020565	9021258	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9021259	9021469	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9021259	9021281	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9021279	9021281	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_170.1;transcript_id=NA19317_ch_T0000256;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000256;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000256;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9018673	9021469	100	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_G0000090;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=NA19317_ch_T0000257;Name=TSPY10
NA19317_chrY	CAT	exon	9018673	9019204	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9018719	9019204	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9018719	9018721	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000257;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019205	9019811	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000257:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9019812	9019889	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9019812	9019889	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019890	9020017	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000257:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020018	9020129	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020018	9020129	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020130	9020230	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000257:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020231	9020376	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020231	9020376	.	+	2	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020377	9020471	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000257:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020472	9020564	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020472	9020534	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9020532	9020534	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000257;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020565	9021258	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000257:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9021259	9021469	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_170.2;transcript_id=NA19317_ch_T0000257;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000257;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000257:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9018673	9021469	100	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_G0000090;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=NA19317_ch_T0000258;Name=TSPY10
NA19317_chrY	CAT	exon	9018673	9019204	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9018719	9019204	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9018719	9018721	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019205	9019811	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9019812	9019889	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9019812	9019889	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019890	9020017	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020018	9020129	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020018	9020129	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020130	9020237	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020238	9020376	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020238	9020376	.	+	2	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020377	9020482	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020483	9020564	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9020483	9020534	.	+	1	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9020532	9020534	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020565	9021258	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9021259	9021469	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_170.3;transcript_id=NA19317_ch_T0000258;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9018673	9021469	1000	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_G0000090;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=NA19317_ch_T0000259;Name=TSPY10
NA19317_chrY	CAT	exon	9018673	9019204	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019205	9019811	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9019812	9019889	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9019890	9020017	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020018	9020129	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020130	9020237	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020238	9020376	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020377	9020471	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9020472	9020564	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9020565	9021258	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9021259	9021469	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_170.4;transcript_id=NA19317_ch_T0000259;gene_id=NA19317_ch_G0000090;Parent=NA19317_ch_T0000259;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9030731	9036411	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_181;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;gene_id=NA19317_ch_G0000091;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000091;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9030731	9036411	1000	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_G0000091;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000260;Name=FAM197Y2
NA19317_chrY	CAT	exon	9030731	9030790	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000260:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9030791	9034339	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000260:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9034340	9034498	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000260:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9034499	9035988	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000260:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9035989	9036134	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000260:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9036135	9036220	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000260:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9036221	9036411	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_171.1;transcript_id=NA19317_ch_T0000260;gene_id=NA19317_ch_G0000091;Parent=NA19317_ch_T0000260;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000260:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9038935	9041731	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;gene_id=NA19317_ch_G0000092;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000092;Name=TSPY10
NA19317_chrY	CAT	transcript	9038935	9041731	100	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_G0000092;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19317_ch_T0000261;Name=TSPY10
NA19317_chrY	CAT	exon	9038935	9039466	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9038981	9039466	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9038981	9038983	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9039467	9040073	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040074	9040151	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040074	9040151	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040152	9040279	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040280	9040391	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040280	9040391	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040392	9040492	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040493	9040638	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040493	9040638	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040639	9040744	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040745	9040826	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040745	9040826	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040827	9041520	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9041521	9041731	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9041521	9041543	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9041541	9041543	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_172.1;transcript_id=NA19317_ch_T0000261;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000261;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000261;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9038935	9041731	100	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_G0000092;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19317_ch_T0000262;Name=TSPY10
NA19317_chrY	CAT	exon	9038935	9039466	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9038981	9039466	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9038981	9038983	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000262;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9039467	9040073	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000262:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040074	9040151	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040074	9040151	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040152	9040279	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000262:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040280	9040391	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040280	9040391	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040392	9040492	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000262:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040493	9040638	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040493	9040638	.	+	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040639	9040733	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000262:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040734	9040826	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040734	9040796	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9040794	9040796	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000262;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040827	9041520	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000262:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9041521	9041731	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_172.2;transcript_id=NA19317_ch_T0000262;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000262;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000262:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9038935	9041731	100	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_G0000092;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=NA19317_ch_T0000263;Name=TSPY10
NA19317_chrY	CAT	exon	9038935	9039466	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9038981	9039466	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9038981	9038983	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9039467	9040073	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040074	9040151	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040074	9040151	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040152	9040279	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040280	9040391	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040280	9040391	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040392	9040499	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040500	9040638	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040500	9040638	.	+	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040639	9040744	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040745	9040826	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9040745	9040796	.	+	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9040794	9040796	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040827	9041520	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9041521	9041731	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_172.3;transcript_id=NA19317_ch_T0000263;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9038935	9041731	1000	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_G0000092;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=NA19317_ch_T0000264;Name=TSPY10
NA19317_chrY	CAT	exon	9038935	9039466	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9039467	9040073	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040074	9040151	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040152	9040279	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040280	9040391	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040392	9040499	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040500	9040638	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040639	9040733	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9040734	9040826	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9040827	9041520	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9041521	9041731	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_172.4;transcript_id=NA19317_ch_T0000264;gene_id=NA19317_ch_G0000092;Parent=NA19317_ch_T0000264;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9051006	9056688	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;gene_id=NA19317_ch_G0000093;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000093;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9051006	9056688	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_G0000093;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000265;Name=FAM197Y2
NA19317_chrY	CAT	exon	9051006	9051065	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000265:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9051066	9054614	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000265:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9054615	9054773	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000265:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9054774	9056265	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000265:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9056266	9056411	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000265:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9056412	9056497	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000265:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9056498	9056688	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_173.1;transcript_id=NA19317_ch_T0000265;gene_id=NA19317_ch_G0000093;Parent=NA19317_ch_T0000265;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000265:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9059212	9062026	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;gene_id=NA19317_ch_G0000094;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19317_ch_G0000094;Name=TSPY4
NA19317_chrY	CAT	transcript	9059212	9062026	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_G0000094;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19317_ch_T0000266;Name=TSPY4
NA19317_chrY	CAT	exon	9059212	9059761	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9059258	9059761	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9059258	9059260	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000266;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9059762	9060368	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000266:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060369	9060446	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060369	9060446	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060447	9060574	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000266:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060575	9060686	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060575	9060686	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060687	9060787	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000266:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060788	9060933	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060788	9060933	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060934	9061039	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000266:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061040	9061121	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9061040	9061121	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9061122	9061815	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000266:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061816	9062026	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000266:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9061816	9061838	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000266:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9061836	9061838	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_174.1;transcript_id=NA19317_ch_T0000266;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000266;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000266;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9059212	9062026	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_G0000094;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19317_ch_T0000267;Name=TSPY4
NA19317_chrY	CAT	exon	9059212	9059761	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9059258	9059761	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000267:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9059258	9059260	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000267;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9059762	9060368	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000267:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060369	9060446	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060369	9060446	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000267:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060447	9060574	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000267:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060575	9060686	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060575	9060686	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000267:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060687	9060787	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000267:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060788	9060933	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060788	9060933	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000267:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060934	9061028	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000267:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061029	9061121	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9061029	9061091	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000267:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9061089	9061091	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000267;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9061122	9061815	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000267:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061816	9062026	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_174.2;transcript_id=NA19317_ch_T0000267;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000267;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000267:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9059212	9062026	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_G0000094;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=NA19317_ch_T0000268;Name=TSPY4
NA19317_chrY	CAT	exon	9059212	9059761	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9059258	9059761	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9059258	9059260	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9059762	9060368	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060369	9060446	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060369	9060446	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060447	9060574	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060575	9060686	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060575	9060686	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060687	9060794	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060795	9060933	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9060795	9060933	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060934	9061039	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061040	9061121	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9061040	9061091	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9061089	9061091	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9061122	9061815	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061816	9062026	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_174.3;transcript_id=NA19317_ch_T0000268;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000268:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9059212	9062026	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_G0000094;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=NA19317_ch_T0000269;Name=TSPY4
NA19317_chrY	CAT	exon	9059212	9059761	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9059762	9060368	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060369	9060446	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060447	9060574	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060575	9060686	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060687	9060794	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9060795	9060933	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9060934	9061028	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061029	9061121	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9061122	9061815	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9061816	9062026	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_174.4;transcript_id=NA19317_ch_T0000269;gene_id=NA19317_ch_G0000094;Parent=NA19317_ch_T0000269;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000269:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9071286	9076983	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;gene_id=NA19317_ch_G0000095;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000095;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9071286	9076983	1000	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_G0000095;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000270;Name=FAM197Y2
NA19317_chrY	CAT	exon	9071286	9071345	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000270:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9071346	9074899	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000270:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9074900	9075058	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000270:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9075059	9076560	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000270:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9076561	9076706	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000270:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9076707	9076792	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000270:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9076793	9076983	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_175.1;transcript_id=NA19317_ch_T0000270;gene_id=NA19317_ch_G0000095;Parent=NA19317_ch_T0000270;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000270:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9079507	9082303	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;gene_id=NA19317_ch_G0000096;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000096;Name=TSPY1
NA19317_chrY	CAT	transcript	9079507	9082303	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_G0000096;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19317_ch_T0000271;Name=TSPY1
NA19317_chrY	CAT	exon	9079507	9080038	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9079553	9080038	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9079553	9079555	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000271;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080039	9080645	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000271:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080646	9080723	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080646	9080723	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080724	9080851	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000271:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080852	9080963	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080852	9080963	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080964	9081064	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000271:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081065	9081210	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081065	9081210	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081211	9081316	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000271:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081317	9081398	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081317	9081398	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081399	9082092	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000271:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9082093	9082303	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000271:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9082093	9082115	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000271:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9082113	9082115	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_176.1;transcript_id=NA19317_ch_T0000271;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000271;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000271;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9079507	9082303	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_G0000096;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19317_ch_T0000272;Name=TSPY1
NA19317_chrY	CAT	exon	9079507	9080038	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9079553	9080038	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000272:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9079553	9079555	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000272;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080039	9080645	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000272:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080646	9080723	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080646	9080723	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000272:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080724	9080851	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000272:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080852	9080963	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080852	9080963	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000272:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080964	9081064	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000272:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081065	9081210	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081065	9081210	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000272:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081211	9081305	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000272:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081306	9081398	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081306	9081368	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000272:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9081366	9081368	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000272;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081399	9082092	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000272:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9082093	9082303	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_176.2;transcript_id=NA19317_ch_T0000272;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000272;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000272:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9079507	9082303	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_G0000096;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19317_ch_T0000273;Name=TSPY1
NA19317_chrY	CAT	exon	9079507	9080038	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9079553	9080038	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000273:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9079553	9079555	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000273;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080039	9080645	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000273:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080646	9080723	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080646	9080723	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000273:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080724	9080851	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000273:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080852	9080963	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080852	9080963	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000273:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080964	9081071	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000273:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081072	9081210	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081072	9081210	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000273:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081211	9081316	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000273:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081317	9081398	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081317	9081368	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000273:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9081366	9081368	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000273;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081399	9082092	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000273:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9082093	9082303	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_176.3;transcript_id=NA19317_ch_T0000273;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000273;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000273:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9079507	9082303	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_G0000096;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=NA19317_ch_T0000274;Name=TSPY1
NA19317_chrY	CAT	exon	9079507	9080038	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080039	9080645	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000274:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080646	9080723	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080724	9080851	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000274:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080852	9080963	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080964	9081071	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000274:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081072	9081210	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081211	9081305	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000274:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081306	9081398	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081399	9082092	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000274:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9082093	9082303	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_176.4;transcript_id=NA19317_ch_T0000274;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000274;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000274:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9079507	9082303	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_G0000096;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19317_ch_T0000275;Name=TSPY1
NA19317_chrY	CAT	exon	9079507	9079639	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9079553	9079639	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9079553	9079555	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000275;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9079640	9079900	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9079901	9080038	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9079901	9080038	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080039	9080645	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080646	9080723	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080646	9080723	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080724	9080851	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9080852	9080963	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9080852	9080963	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9080964	9081064	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081065	9081210	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081065	9081210	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081211	9081316	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9081317	9081398	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9081317	9081398	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9081399	9082092	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000275:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9082093	9082303	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000275:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9082093	9082115	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000275:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9082113	9082115	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000275;gene_id=NA19317_ch_G0000096;Parent=NA19317_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000275;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9091583	9097184	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;gene_id=NA19317_ch_G0000097;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000097;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9091583	9097184	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_G0000097;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000276;Name=FAM197Y3
NA19317_chrY	CAT	exon	9091583	9091642	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000276:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9091643	9095193	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000276:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9095194	9095352	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000276:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9095353	9096850	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000276:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9096851	9096996	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000276:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9096997	9097082	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000276:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9097083	9097184	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_177.1,hg002_chrY_paternal_177.1;transcript_id=NA19317_ch_T0000276;gene_id=NA19317_ch_G0000097;Parent=NA19317_ch_T0000276;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000276:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9099797	9102593	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_180;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;gene_id=NA19317_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000098;Name=TSPY10
NA19317_chrY	CAT	transcript	9099797	9102593	100	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_G0000098;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=NA19317_ch_T0000277;Name=TSPY10
NA19317_chrY	CAT	exon	9099797	9100328	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9099843	9100328	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9099843	9099845	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000277;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9100329	9100935	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000277:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9100936	9101013	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9100936	9101013	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101014	9101141	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000277:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101142	9101253	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101142	9101253	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101254	9101354	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000277:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101355	9101500	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101355	9101500	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101501	9101606	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000277:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101607	9101688	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101607	9101688	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101689	9102382	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000277:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9102383	9102593	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000277:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9102383	9102405	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000277:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9102403	9102405	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_178.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000277;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000277;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000277;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9099797	9102593	100	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_G0000098;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=NA19317_ch_T0000278;Name=TSPY10
NA19317_chrY	CAT	exon	9099797	9100328	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9099843	9100328	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000278:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9099843	9099845	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000278;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9100329	9100935	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000278:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9100936	9101013	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9100936	9101013	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000278:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101014	9101141	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000278:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101142	9101253	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101142	9101253	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000278:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101254	9101354	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000278:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101355	9101500	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101355	9101500	.	+	2	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000278:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101501	9101595	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000278:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101596	9101688	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101596	9101658	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000278:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9101656	9101658	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000278;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101689	9102382	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000278:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9102383	9102593	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_178.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000278;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000278;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000278:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9099797	9102593	100	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_G0000098;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=NA19317_ch_T0000279;Name=TSPY10
NA19317_chrY	CAT	exon	9099797	9100328	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9099843	9100328	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000279:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9099843	9099845	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000279;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9100329	9100935	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000279:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9100936	9101013	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9100936	9101013	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000279:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101014	9101141	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000279:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101142	9101253	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101142	9101253	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000279:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101254	9101361	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000279:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101362	9101500	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101362	9101500	.	+	2	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000279:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101501	9101606	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000279:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101607	9101688	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9101607	9101658	.	+	1	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000279:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9101656	9101658	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000279;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101689	9102382	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000279:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9102383	9102593	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_178.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000279;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000279;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000279:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9099797	9102593	1000	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_G0000098;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=NA19317_ch_T0000280;Name=TSPY10
NA19317_chrY	CAT	exon	9099797	9100328	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9100329	9100935	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000280:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9100936	9101013	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101014	9101141	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000280:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101142	9101253	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101254	9101361	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000280:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101362	9101500	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101501	9101595	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000280:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9101596	9101688	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9101689	9102382	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000280:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9102383	9102593	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_178.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000280;gene_id=NA19317_ch_G0000098;Parent=NA19317_ch_T0000280;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000280:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9111863	9117474	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;gene_id=NA19317_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=NA19317_ch_G0000099;Name=FAM197Y6
NA19317_chrY	CAT	transcript	9111863	9117474	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_G0000099;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=NA19317_ch_T0000281;Name=FAM197Y6
NA19317_chrY	CAT	exon	9111863	9111922	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:NA19317_ch_T0000281:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9111923	9115477	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:NA19317_ch_T0000281:0;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9115478	9115636	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:NA19317_ch_T0000281:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9115637	9117140	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:NA19317_ch_T0000281:1;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9117141	9117286	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:NA19317_ch_T0000281:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9117287	9117372	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:NA19317_ch_T0000281:2;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9117373	9117474	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_179.1;transcript_id=NA19317_ch_T0000281;gene_id=NA19317_ch_G0000099;Parent=NA19317_ch_T0000281;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:NA19317_ch_T0000281:3;Name=FAM197Y6;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9120087	9122884	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;gene_id=NA19317_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000100;Name=TSPY10
NA19317_chrY	CAT	transcript	9120087	9122884	100	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_G0000100;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=NA19317_ch_T0000282;Name=TSPY10
NA19317_chrY	CAT	exon	9120087	9120618	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9120133	9120618	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9120133	9120135	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000282;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9120619	9121225	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000282:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121226	9121303	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121226	9121303	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121304	9121431	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000282:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121432	9121543	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121432	9121543	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121544	9121644	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000282:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121645	9121790	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121645	9121790	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121791	9121896	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000282:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121897	9121978	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121897	9121978	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121979	9122672	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000282:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9122673	9122884	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000282:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9122673	9122695	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000282:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9122693	9122695	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_180.1;transcript_id=NA19317_ch_T0000282;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000282;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000282;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9120087	9122884	100	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_G0000100;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=NA19317_ch_T0000283;Name=TSPY10
NA19317_chrY	CAT	exon	9120087	9120618	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9120133	9120618	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9120133	9120135	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000283;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9120619	9121225	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000283:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121226	9121303	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121226	9121303	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121304	9121431	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000283:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121432	9121543	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121432	9121543	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121544	9121644	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000283:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121645	9121790	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121645	9121790	.	+	2	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121791	9121885	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000283:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121886	9121978	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121886	9121948	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9121946	9121948	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000283;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121979	9122672	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000283:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9122673	9122884	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_180.2;transcript_id=NA19317_ch_T0000283;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000283;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000283:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9120087	9122884	100	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_G0000100;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=NA19317_ch_T0000284;Name=TSPY10
NA19317_chrY	CAT	exon	9120087	9120618	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9120133	9120618	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000284:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9120133	9120135	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000284;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9120619	9121225	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000284:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121226	9121303	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121226	9121303	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000284:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121304	9121431	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000284:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121432	9121543	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121432	9121543	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000284:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121544	9121651	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000284:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121652	9121790	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121652	9121790	.	+	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000284:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121791	9121896	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000284:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121897	9121978	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9121897	9121948	.	+	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000284:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9121946	9121948	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000284;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121979	9122672	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000284:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9122673	9122884	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_180.3;transcript_id=NA19317_ch_T0000284;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000284;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000284:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9120087	9122884	1000	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_G0000100;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=NA19317_ch_T0000285;Name=TSPY10
NA19317_chrY	CAT	exon	9120087	9120618	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9120619	9121225	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000285:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121226	9121303	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121304	9121431	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000285:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121432	9121543	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121544	9121651	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000285:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121652	9121790	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121791	9121885	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000285:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9121886	9121978	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9121979	9122672	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000285:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9122673	9122884	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_180.4;transcript_id=NA19317_ch_T0000285;gene_id=NA19317_ch_G0000100;Parent=NA19317_ch_T0000285;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000285:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9132174	9137862	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_175;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;gene_id=NA19317_ch_G0000101;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000101;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9132174	9137862	1000	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_G0000101;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000286;Name=FAM197Y2
NA19317_chrY	CAT	exon	9132174	9132233	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000286:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9132234	9135784	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000286:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9135785	9135943	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000286:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9135944	9137439	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000286:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9137440	9137585	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000286:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9137586	9137671	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000286:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9137672	9137862	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1,hg002_chrY_paternal_181.1;transcript_id=NA19317_ch_T0000286;gene_id=NA19317_ch_G0000101;Parent=NA19317_ch_T0000286;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000286:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9140387	9143183	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;gene_id=NA19317_ch_G0000102;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000102;Name=TSPY1
NA19317_chrY	CAT	transcript	9140387	9143183	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19317_ch_T0000287;Name=TSPY1
NA19317_chrY	CAT	exon	9140387	9140918	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9140433	9140918	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9140433	9140435	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140919	9141525	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000287:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141526	9141603	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141526	9141603	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141604	9141731	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000287:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141732	9141843	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141732	9141843	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141844	9141944	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000287:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141945	9142090	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141945	9142090	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142091	9142196	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000287:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142197	9142278	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142197	9142278	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142279	9142972	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000287:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142973	9143183	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000287:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142973	9142995	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000287:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9142993	9142995	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_182.1;transcript_id=NA19317_ch_T0000287;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000287;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000287;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9140387	9143183	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19317_ch_T0000288;Name=TSPY1
NA19317_chrY	CAT	exon	9140387	9140918	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9140433	9140918	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9140433	9140435	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140919	9141525	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000288:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141526	9141603	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141526	9141603	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141604	9141731	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000288:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141732	9141843	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141732	9141843	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141844	9141944	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000288:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141945	9142090	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141945	9142090	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142091	9142185	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000288:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142186	9142278	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142186	9142248	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9142246	9142248	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000288;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142279	9142972	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000288:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142973	9143183	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_182.2;transcript_id=NA19317_ch_T0000288;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000288;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000288:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9140387	9143183	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19317_ch_T0000289;Name=TSPY1
NA19317_chrY	CAT	exon	9140387	9140918	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9140433	9140918	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9140433	9140435	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000289;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140919	9141525	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000289:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141526	9141603	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141526	9141603	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141604	9141731	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000289:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141732	9141843	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141732	9141843	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141844	9141951	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000289:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141952	9142090	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141952	9142090	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142091	9142196	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000289:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142197	9142278	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142197	9142248	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9142246	9142248	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000289;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142279	9142972	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000289:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142973	9143183	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_182.3;transcript_id=NA19317_ch_T0000289;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000289;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000289:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9140387	9143183	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_G0000102;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=NA19317_ch_T0000290;Name=TSPY1
NA19317_chrY	CAT	exon	9140387	9140519	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9140433	9140519	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9140433	9140435	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000290;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140520	9140780	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9140781	9140918	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9140781	9140918	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140919	9141525	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141526	9141603	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141526	9141603	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141604	9141731	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141732	9141843	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141732	9141843	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141844	9141944	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141945	9142090	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9141945	9142090	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142091	9142196	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142197	9142278	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142197	9142278	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142279	9142972	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000290:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142973	9143183	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000290:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9142973	9142995	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000290:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9142993	9142995	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000290;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000290;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000290;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9140387	9143183	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_G0000102;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=NA19317_ch_T0000291;Name=TSPY1
NA19317_chrY	CAT	exon	9140387	9140918	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9140919	9141525	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000291:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141526	9141603	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141604	9141731	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000291:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141732	9141843	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9141844	9141951	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000291:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9141952	9142090	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142091	9142185	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000291:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142186	9142278	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9142279	9142972	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000291:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9142973	9143183	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_182.4;transcript_id=NA19317_ch_T0000291;gene_id=NA19317_ch_G0000102;Parent=NA19317_ch_T0000291;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000291:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9152465	9158151	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;gene_id=NA19317_ch_G0000103;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000103;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9152465	9158151	1000	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_G0000103;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000292;Name=FAM197Y2
NA19317_chrY	CAT	exon	9152465	9152524	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000292:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9152525	9156073	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000292:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9156074	9156232	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000292:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9156233	9157728	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000292:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9157729	9157874	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000292:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9157875	9157960	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000292:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9157961	9158151	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_183.1;transcript_id=NA19317_ch_T0000292;gene_id=NA19317_ch_G0000103;Parent=NA19317_ch_T0000292;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000292:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9160675	9162309	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_184.2;gene_id=NA19317_ch_G0000104;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=augTM,transMap_pairwise;ID=NA19317_ch_G0000104;Name=TSPY4
NA19317_chrY	CAT	transcript	9160675	9162309	9990	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_G0000104;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=NA19317_ch_T0000293;Name=TSPY4
NA19317_chrY	CAT	exon	9160675	9161224	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000293:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9160721	9161224	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000293:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9160721	9160723	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000293;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161225	9161831	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000293:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9161832	9161909	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000293:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9161832	9161909	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000293:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161910	9162037	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000293:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162038	9162149	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000293:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9162038	9162149	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000293:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9162150	9162250	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000293:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162251	9162309	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000293:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9162251	9162309	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000293:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9162307	9162309	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_184.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000293;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000293;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000293;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9160675	9162309	9990	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_G0000104;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=NA19317_ch_T0000294;Name=TSPY4
NA19317_chrY	CAT	exon	9160675	9161224	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000294:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9160721	9161224	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000294:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9160721	9160723	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000294;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161225	9161831	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000294:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9161832	9161909	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000294:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9161832	9161909	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000294:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161910	9162037	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000294:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162038	9162149	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000294:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9162038	9162149	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000294:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9162150	9162257	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000294:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162258	9162309	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000294:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9162258	9162309	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000294:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9162307	9162309	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000294;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000294;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000294;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9160675	9162309	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_G0000104;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=NA19317_ch_T0000295;Name=TSPY4
NA19317_chrY	CAT	exon	9160675	9161224	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000295:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161225	9161831	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000295:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9161832	9161909	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000295:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9161910	9162037	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000295:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162038	9162149	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000295:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9162150	9162257	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000295:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9162258	9162309	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000295;gene_id=NA19317_ch_G0000104;Parent=NA19317_ch_T0000295;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000295:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9172755	9178366	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_187.1;gene_id=NA19317_ch_G0000105;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000105;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9172755	9178366	1000	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_G0000105;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000296;Name=FAM197Y3
NA19317_chrY	CAT	exon	9172755	9172814	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000296:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9172815	9176365	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000296:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9176366	9176524	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000296:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9176525	9178032	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000296:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9178033	9178178	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000296:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9178179	9178264	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000296:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9178265	9178366	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1;transcript_id=NA19317_ch_T0000296;gene_id=NA19317_ch_G0000105;Parent=NA19317_ch_T0000296;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000296:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9180979	9183775	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_156;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;gene_id=NA19317_ch_G0000106;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=NA19317_ch_G0000106;Name=TSPY8
NA19317_chrY	CAT	transcript	9180979	9183775	100	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_G0000106;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=NA19317_ch_T0000297;Name=TSPY8
NA19317_chrY	CAT	exon	9180979	9181510	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9181025	9181510	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9181025	9181027	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:NA19317_ch_T0000297;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9181511	9182117	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000297:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182118	9182195	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182118	9182195	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182196	9182323	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000297:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182324	9182435	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182324	9182435	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182436	9182536	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000297:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182537	9182682	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182537	9182682	.	+	2	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182683	9182788	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000297:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182789	9182870	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182789	9182870	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182871	9183564	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000297:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9183565	9183775	.	+	.	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000297:5;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9183565	9183587	.	+	2	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000297:5;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9183585	9183587	.	+	0	source_transcript=hg002_chrY_paternal_156.1;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_188.1;transcript_id=NA19317_ch_T0000297;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000297;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:NA19317_ch_T0000297;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9180979	9183775	100	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_G0000106;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=NA19317_ch_T0000298;Name=TSPY8
NA19317_chrY	CAT	exon	9180979	9181510	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9181025	9181510	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000298:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9181025	9181027	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:NA19317_ch_T0000298;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9181511	9182117	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000298:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182118	9182195	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182118	9182195	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000298:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182196	9182323	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000298:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182324	9182435	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182324	9182435	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000298:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182436	9182536	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000298:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182537	9182682	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182537	9182682	.	+	2	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000298:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182683	9182777	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000298:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182778	9182870	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182778	9182840	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000298:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9182838	9182840	.	+	0	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:NA19317_ch_T0000298;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182871	9183564	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000298:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9183565	9183775	.	+	.	source_transcript=hg002_chrY_paternal_156.2;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_188.2;transcript_id=NA19317_ch_T0000298;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000298;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000298:5;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9180979	9183775	100	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_G0000106;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=NA19317_ch_T0000299;Name=TSPY8
NA19317_chrY	CAT	exon	9180979	9181510	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9181025	9181510	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000299:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9181025	9181027	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=start_codon:NA19317_ch_T0000299;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9181511	9182117	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000299:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182118	9182195	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182118	9182195	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000299:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182196	9182323	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000299:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182324	9182435	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182324	9182435	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000299:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182436	9182543	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000299:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182544	9182682	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182544	9182682	.	+	2	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000299:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182683	9182788	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000299:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182789	9182870	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9182789	9182840	.	+	1	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=CDS:NA19317_ch_T0000299:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9182838	9182840	.	+	0	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=stop_codon:NA19317_ch_T0000299;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182871	9183564	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=intron:NA19317_ch_T0000299:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9183565	9183775	.	+	.	source_transcript=hg002_chrY_paternal_156.3;source_transcript_name=hg002_chrY_paternal_156.4;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_156.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_188.3;transcript_id=NA19317_ch_T0000299;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000299;transcript_name=hg002_chrY_paternal_156.4;gene_name=TSPY8;ID=exon:NA19317_ch_T0000299:5;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9180979	9183775	1000	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_G0000106;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=NA19317_ch_T0000300;Name=TSPY8
NA19317_chrY	CAT	exon	9180979	9181510	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9181511	9182117	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:NA19317_ch_T0000300:0;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182118	9182195	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182196	9182323	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:NA19317_ch_T0000300:1;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182324	9182435	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182436	9182543	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:NA19317_ch_T0000300:2;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182544	9182682	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182683	9182777	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:NA19317_ch_T0000300:3;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9182778	9182870	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9182871	9183564	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=intron:NA19317_ch_T0000300:4;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9183565	9183775	.	+	.	source_transcript=hg002_chrY_paternal_156.4;source_transcript_name=hg002_chrY_paternal_156.1;source_gene=hg002_chrY_paternal_156;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_156;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_156.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_156.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_188.4,hg002_chrY_paternal_186.4;transcript_id=NA19317_ch_T0000300;gene_id=NA19317_ch_G0000106;Parent=NA19317_ch_T0000300;transcript_name=hg002_chrY_paternal_156.1;gene_name=TSPY8;ID=exon:NA19317_ch_T0000300:5;Name=TSPY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9193044	9198738	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;gene_id=NA19317_ch_G0000107;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000107;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9193044	9198738	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_G0000107;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000301;Name=FAM197Y2
NA19317_chrY	CAT	exon	9193044	9193103	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000301:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9193104	9196654	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000301:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9196655	9196813	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000301:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9196814	9198315	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000301:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9198316	9198461	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000301:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9198462	9198547	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000301:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9198548	9198738	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=NA19317_ch_T0000301;gene_id=NA19317_ch_G0000107;Parent=NA19317_ch_T0000301;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000301:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9201262	9204059	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_208;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;gene_id=NA19317_ch_G0000108;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA19317_ch_G0000108;Name=TSPY3
NA19317_chrY	CAT	transcript	9201262	9204059	100	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_G0000108;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=NA19317_ch_T0000302;Name=TSPY3
NA19317_chrY	CAT	exon	9201262	9201793	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9201308	9201793	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9201308	9201310	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000302;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9201794	9202400	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000302:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202401	9202478	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202401	9202478	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202479	9202606	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000302:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202607	9202718	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202607	9202718	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202719	9202819	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000302:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202820	9202965	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202820	9202965	.	+	2	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202966	9203071	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000302:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203072	9203153	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9203072	9203153	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9203154	9203847	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000302:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203848	9204059	.	+	.	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000302:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9203848	9203870	.	+	2	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000302:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9203868	9203870	.	+	0	source_transcript=hg002_chrY_paternal_208.1;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_190.1;transcript_id=NA19317_ch_T0000302;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000302;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000302;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9201262	9204059	100	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_G0000108;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=NA19317_ch_T0000303;Name=TSPY3
NA19317_chrY	CAT	exon	9201262	9201793	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9201308	9201793	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9201308	9201310	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000303;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9201794	9202400	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000303:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202401	9202478	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202401	9202478	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202479	9202606	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000303:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202607	9202718	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202607	9202718	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202719	9202819	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000303:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202820	9202965	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202820	9202965	.	+	2	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202966	9203060	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000303:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203061	9203153	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9203061	9203123	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9203121	9203123	.	+	0	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000303;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9203154	9203847	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000303:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203848	9204059	.	+	.	source_transcript=hg002_chrY_paternal_208.2;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_190.2;transcript_id=NA19317_ch_T0000303;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000303;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000303:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9201262	9204059	100	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_G0000108;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=NA19317_ch_T0000304;Name=TSPY3
NA19317_chrY	CAT	exon	9201262	9201793	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9201308	9201793	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000304:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9201308	9201310	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000304;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9201794	9202400	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000304:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202401	9202478	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202401	9202478	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000304:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202479	9202606	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000304:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202607	9202718	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202607	9202718	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000304:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202719	9202826	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000304:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202827	9202965	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9202827	9202965	.	+	2	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000304:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202966	9203071	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000304:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203072	9203153	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9203072	9203123	.	+	1	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000304:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9203121	9203123	.	+	0	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000304;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9203154	9203847	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000304:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203848	9204059	.	+	.	source_transcript=hg002_chrY_paternal_208.3;source_transcript_name=hg002_chrY_paternal_208.4;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_208.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_190.3;transcript_id=NA19317_ch_T0000304;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000304;transcript_name=hg002_chrY_paternal_208.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000304:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9201262	9204059	1000	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_G0000108;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=NA19317_ch_T0000305;Name=TSPY3
NA19317_chrY	CAT	exon	9201262	9201793	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9201794	9202400	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000305:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202401	9202478	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202479	9202606	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000305:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202607	9202718	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202719	9202826	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000305:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9202827	9202965	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9202966	9203060	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000305:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203061	9203153	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9203154	9203847	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000305:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9203848	9204059	.	+	.	source_transcript=hg002_chrY_paternal_208.4;source_transcript_name=hg002_chrY_paternal_208.1;source_gene=hg002_chrY_paternal_208;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_208;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_208.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_208.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_190.4;transcript_id=NA19317_ch_T0000305;gene_id=NA19317_ch_G0000108;Parent=NA19317_ch_T0000305;transcript_name=hg002_chrY_paternal_208.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000305:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9213363	9219047	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;gene_id=NA19317_ch_G0000109;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000109;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9213363	9219047	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_G0000109;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000306;Name=FAM197Y2
NA19317_chrY	CAT	exon	9213363	9213422	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000306:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9213423	9216969	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000306:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9216970	9217128	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000306:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9217129	9218624	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000306:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9218625	9218770	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000306:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9218771	9218856	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000306:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9218857	9219047	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_191.1;transcript_id=NA19317_ch_T0000306;gene_id=NA19317_ch_G0000109;Parent=NA19317_ch_T0000306;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000306:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9221572	9224368	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;gene_id=NA19317_ch_G0000110;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000110;Name=TSPY1
NA19317_chrY	CAT	transcript	9221572	9224368	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_G0000110;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19317_ch_T0000307;Name=TSPY1
NA19317_chrY	CAT	exon	9221572	9222103	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9221618	9222103	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9221618	9221620	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000307;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222104	9222710	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000307:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222711	9222788	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222711	9222788	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222789	9222916	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000307:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222917	9223028	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222917	9223028	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223029	9223129	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000307:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223130	9223275	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223130	9223275	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223276	9223381	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000307:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223382	9223463	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223382	9223463	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223464	9224157	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000307:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9224158	9224368	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000307:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9224158	9224180	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000307:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9224178	9224180	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_192.1;transcript_id=NA19317_ch_T0000307;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000307;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000307;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9221572	9224368	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_G0000110;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19317_ch_T0000308;Name=TSPY1
NA19317_chrY	CAT	exon	9221572	9222103	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9221618	9222103	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000308:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9221618	9221620	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000308;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222104	9222710	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000308:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222711	9222788	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222711	9222788	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000308:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222789	9222916	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000308:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222917	9223028	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222917	9223028	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000308:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223029	9223129	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000308:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223130	9223275	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223130	9223275	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000308:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223276	9223370	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000308:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223371	9223463	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223371	9223433	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000308:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9223431	9223433	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000308;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223464	9224157	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000308:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9224158	9224368	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_192.2;transcript_id=NA19317_ch_T0000308;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000308;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000308:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9221572	9224368	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_G0000110;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19317_ch_T0000309;Name=TSPY1
NA19317_chrY	CAT	exon	9221572	9222103	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9221618	9222103	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9221618	9221620	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000309;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222104	9222710	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000309:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222711	9222788	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222711	9222788	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222789	9222916	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000309:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222917	9223028	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222917	9223028	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223029	9223136	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000309:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223137	9223275	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223137	9223275	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223276	9223381	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000309:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223382	9223463	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223382	9223433	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9223431	9223433	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000309;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223464	9224157	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000309:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9224158	9224368	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_192.3;transcript_id=NA19317_ch_T0000309;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000309;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000309:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9221572	9224368	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_G0000110;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=NA19317_ch_T0000310;Name=TSPY1
NA19317_chrY	CAT	exon	9221572	9221704	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9221618	9221704	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9221618	9221620	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000310;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9221705	9221965	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9221966	9222103	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9221966	9222103	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222104	9222710	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222711	9222788	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222711	9222788	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222789	9222916	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222917	9223028	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9222917	9223028	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223029	9223129	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223130	9223275	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223130	9223275	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223276	9223381	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223382	9223463	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9223382	9223463	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223464	9224157	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000310:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9224158	9224368	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000310:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9224158	9224180	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000310:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9224178	9224180	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000310;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000310;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000310;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9221572	9224368	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_G0000110;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=NA19317_ch_T0000311;Name=TSPY1
NA19317_chrY	CAT	exon	9221572	9222103	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222104	9222710	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000311:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222711	9222788	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9222789	9222916	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000311:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9222917	9223028	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223029	9223136	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000311:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223137	9223275	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223276	9223370	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000311:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9223371	9223463	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9223464	9224157	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000311:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9224158	9224368	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_192.4;transcript_id=NA19317_ch_T0000311;gene_id=NA19317_ch_G0000110;Parent=NA19317_ch_T0000311;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000311:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9233657	9239344	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;gene_id=NA19317_ch_G0000111;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000111;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9233657	9239344	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_G0000111;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000312;Name=FAM197Y2
NA19317_chrY	CAT	exon	9233657	9233716	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000312:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9233717	9237265	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000312:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9237266	9237424	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000312:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9237425	9238921	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000312:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9238922	9239067	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000312:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9239068	9239153	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000312:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9239154	9239344	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_193.1;transcript_id=NA19317_ch_T0000312;gene_id=NA19317_ch_G0000111;Parent=NA19317_ch_T0000312;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000312:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9241868	9244664	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_204;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;gene_id=NA19317_ch_G0000112;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=NA19317_ch_G0000112;Name=TSPY3
NA19317_chrY	CAT	transcript	9241868	9244664	100	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_G0000112;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=NA19317_ch_T0000313;Name=TSPY3
NA19317_chrY	CAT	exon	9241868	9242399	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9241914	9242399	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9241914	9241916	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000313;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9242400	9243006	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000313:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243007	9243084	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243007	9243084	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243085	9243212	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000313:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243213	9243324	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243213	9243324	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243325	9243425	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000313:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243426	9243571	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243426	9243571	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243572	9243677	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000313:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243678	9243759	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243678	9243759	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243760	9244453	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000313:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9244454	9244664	.	+	.	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000313:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9244454	9244476	.	+	2	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000313:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9244474	9244476	.	+	0	source_transcript=hg002_chrY_paternal_204.1;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_194.1;transcript_id=NA19317_ch_T0000313;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000313;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000313;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9241868	9244664	100	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_G0000112;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=NA19317_ch_T0000314;Name=TSPY3
NA19317_chrY	CAT	exon	9241868	9242399	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9241914	9242399	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000314:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9241914	9241916	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000314;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9242400	9243006	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000314:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243007	9243084	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243007	9243084	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000314:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243085	9243212	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000314:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243213	9243324	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243213	9243324	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000314:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243325	9243425	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000314:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243426	9243571	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243426	9243571	.	+	2	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000314:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243572	9243666	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000314:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243667	9243759	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243667	9243729	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000314:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9243727	9243729	.	+	0	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000314;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243760	9244453	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000314:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9244454	9244664	.	+	.	source_transcript=hg002_chrY_paternal_204.2;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_194.2;transcript_id=NA19317_ch_T0000314;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000314;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000314:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9241868	9244664	100	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_G0000112;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=NA19317_ch_T0000315;Name=TSPY3
NA19317_chrY	CAT	exon	9241868	9242399	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9241914	9242399	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000315:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9241914	9241916	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=start_codon:NA19317_ch_T0000315;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9242400	9243006	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000315:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243007	9243084	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243007	9243084	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000315:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243085	9243212	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000315:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243213	9243324	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243213	9243324	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000315:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243325	9243432	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000315:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243433	9243571	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243433	9243571	.	+	2	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000315:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243572	9243677	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000315:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243678	9243759	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9243678	9243729	.	+	1	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=CDS:NA19317_ch_T0000315:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9243727	9243729	.	+	0	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=stop_codon:NA19317_ch_T0000315;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243760	9244453	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:NA19317_ch_T0000315:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9244454	9244664	.	+	.	source_transcript=hg002_chrY_paternal_204.3;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_204.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.3,hg002_chrY_paternal_194.3;transcript_id=NA19317_ch_T0000315;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000315;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:NA19317_ch_T0000315:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9241868	9244664	1000	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_G0000112;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=NA19317_ch_T0000316;Name=TSPY3
NA19317_chrY	CAT	exon	9241868	9242399	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9242400	9243006	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000316:0;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243007	9243084	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243085	9243212	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000316:1;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243213	9243324	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243325	9243432	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000316:2;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243433	9243571	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243572	9243666	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000316:3;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9243667	9243759	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9243760	9244453	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=intron:NA19317_ch_T0000316:4;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9244454	9244664	.	+	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.1;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4,hg002_chrY_paternal_194.4;transcript_id=NA19317_ch_T0000316;gene_id=NA19317_ch_G0000112;Parent=NA19317_ch_T0000316;transcript_name=hg002_chrY_paternal_204.1;gene_name=TSPY3;ID=exon:NA19317_ch_T0000316:5;Name=TSPY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9253934	9259547	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;gene_id=NA19317_ch_G0000113;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000113;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9253934	9259547	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_G0000113;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000317;Name=FAM197Y3
NA19317_chrY	CAT	exon	9253934	9253993	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000317:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9253994	9257544	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000317:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9257545	9257703	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000317:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9257704	9259213	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000317:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9259214	9259359	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000317:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9259360	9259445	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000317:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9259446	9259547	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000317;gene_id=NA19317_ch_G0000113;Parent=NA19317_ch_T0000317;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000317:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9262160	9264956	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_196.2;gene_id=NA19317_ch_G0000114;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=NA19317_ch_G0000114;Name=TSPY1
NA19317_chrY	CAT	transcript	9262160	9264956	9970	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_G0000114;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=NA19317_ch_T0000318;Name=TSPY1
NA19317_chrY	CAT	exon	9262160	9262292	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9262206	9262292	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9262206	9262208	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9262293	9262553	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9262554	9262691	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9262554	9262691	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9262692	9263298	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9263299	9263376	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9263299	9263376	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9263377	9263504	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9263505	9263616	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9263505	9263616	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9263617	9263717	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9263718	9263863	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9263718	9263863	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9263864	9263969	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9263970	9264051	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9263970	9264051	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9264052	9264745	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9264746	9264956	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000318:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9264746	9264768	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000318:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9264766	9264768	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000318;gene_id=NA19317_ch_G0000114;Parent=NA19317_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9274228	9279829	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;gene_id=NA19317_ch_G0000115;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000115;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9274228	9279829	1000	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_G0000115;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000319;Name=FAM197Y3
NA19317_chrY	CAT	exon	9274228	9274287	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000319:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9274288	9277838	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000319:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9277839	9277997	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000319:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9277998	9279495	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000319:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9279496	9279641	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000319:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9279642	9279727	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000319:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9279728	9279829	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1,hg002_chrY_paternal_197.1;transcript_id=NA19317_ch_T0000319;gene_id=NA19317_ch_G0000115;Parent=NA19317_ch_T0000319;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000319:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9282442	9285238	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;gene_id=NA19317_ch_G0000116;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000116;Name=TSPY1
NA19317_chrY	CAT	transcript	9282442	9285238	100	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_G0000116;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19317_ch_T0000320;Name=TSPY1
NA19317_chrY	CAT	exon	9282442	9282973	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9282488	9282973	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9282488	9282490	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000320;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282974	9283580	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283581	9283658	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283581	9283658	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283659	9283786	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283787	9283898	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283787	9283898	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283899	9283999	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284000	9284145	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284000	9284145	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284146	9284240	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284241	9284333	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284241	9284303	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9284301	9284303	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000320;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284334	9285027	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9285028	9285238	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.1,hg002_chrY_paternal_198.1;transcript_id=NA19317_ch_T0000320;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000320;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000320:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9282442	9285238	100	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_G0000116;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19317_ch_T0000321;Name=TSPY1
NA19317_chrY	CAT	exon	9282442	9282574	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9282488	9282574	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9282488	9282490	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000321;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282575	9282835	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9282836	9282973	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9282836	9282973	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282974	9283580	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283581	9283658	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283581	9283658	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283659	9283786	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283787	9283898	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283787	9283898	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283899	9283999	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284000	9284145	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284000	9284145	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284146	9284251	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284252	9284333	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284252	9284333	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284334	9285027	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000321:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9285028	9285238	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000321:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9285028	9285050	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000321:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9285048	9285050	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2,hg002_chrY_paternal_198.2;transcript_id=NA19317_ch_T0000321;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000321;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000321;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9282442	9285238	100	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_G0000116;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19317_ch_T0000322;Name=TSPY1
NA19317_chrY	CAT	exon	9282442	9282973	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9282488	9282973	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9282488	9282490	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282974	9283580	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000322:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283581	9283658	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283581	9283658	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283659	9283786	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000322:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283787	9283898	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283787	9283898	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283899	9283999	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000322:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284000	9284145	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284000	9284145	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284146	9284251	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000322:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284252	9284333	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284252	9284333	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284334	9285027	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000322:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9285028	9285238	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9285028	9285050	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000322:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9285048	9285050	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.3,hg002_chrY_paternal_198.3;transcript_id=NA19317_ch_T0000322;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000322;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000322;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9282442	9285238	100	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_G0000116;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19317_ch_T0000323;Name=TSPY1
NA19317_chrY	CAT	exon	9282442	9282973	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9282488	9282973	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9282488	9282490	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000323;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282974	9283580	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000323:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283581	9283658	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283581	9283658	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283659	9283786	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000323:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283787	9283898	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9283787	9283898	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283899	9284006	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000323:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284007	9284145	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284007	9284145	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284146	9284251	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000323:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284252	9284333	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9284252	9284303	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9284301	9284303	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000323;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284334	9285027	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000323:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9285028	9285238	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.4,hg002_chrY_paternal_198.4;transcript_id=NA19317_ch_T0000323;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000323;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000323:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9282442	9285238	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_G0000116;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=NA19317_ch_T0000324;Name=TSPY1
NA19317_chrY	CAT	exon	9282442	9282973	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9282974	9283580	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000324:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283581	9283658	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283659	9283786	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000324:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9283787	9283898	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9283899	9284006	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000324:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284007	9284145	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284146	9284240	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000324:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9284241	9284333	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9284334	9285027	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000324:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9285028	9285238	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.5,hg002_chrY_paternal_198.5;transcript_id=NA19317_ch_T0000324;gene_id=NA19317_ch_G0000116;Parent=NA19317_ch_T0000324;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000324:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9294508	9298279	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;gene_id=NA19317_ch_G0000117;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=transMap,transMap_pairwise;ID=NA19317_ch_G0000117;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9294508	9298279	1000	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.438;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000325;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_G0000117;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000325;Name=FAM197Y3
NA19317_chrY	CAT	exon	9294508	9294567	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.438;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000325;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_T0000325;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000325:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9294568	9298120	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.438;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000325;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_T0000325;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000325:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9298121	9298279	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=246.438;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000325;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_T0000325;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000325:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9294508	9294567	1000	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000326;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_G0000117;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000326;Name=FAM197Y3
NA19317_chrY	CAT	exon	9294508	9294567	.	-	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=NA19317_ch_T0000326;gene_id=NA19317_ch_G0000117;Parent=NA19317_ch_T0000326;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000326:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9302732	9305529	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_228;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;gene_id=NA19317_ch_G0000118;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000118;Name=TSPY10
NA19317_chrY	CAT	transcript	9302732	9305529	9980	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_G0000118;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=NA19317_ch_T0000327;Name=TSPY10
NA19317_chrY	CAT	exon	9302732	9303263	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9302778	9303263	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9302778	9302780	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000327;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303264	9303870	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000327:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9303871	9303948	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9303871	9303948	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303949	9304076	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000327:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304077	9304188	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304077	9304188	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304189	9304289	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000327:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304290	9304435	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304290	9304435	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304436	9304541	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000327:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304542	9304623	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304542	9304623	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304624	9305317	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000327:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9305318	9305529	.	+	.	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000327:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9305318	9305340	.	+	2	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000327:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9305338	9305340	.	+	0	source_transcript=hg002_chrY_paternal_228.1;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_208.1;transcript_id=NA19317_ch_T0000327;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000327;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000327;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9302732	9305529	9980	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_G0000118;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=NA19317_ch_T0000328;Name=TSPY10
NA19317_chrY	CAT	exon	9302732	9303263	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9302778	9303263	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9302778	9302780	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000328;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303264	9303870	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000328:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9303871	9303948	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9303871	9303948	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303949	9304076	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000328:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304077	9304188	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304077	9304188	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304189	9304289	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000328:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304290	9304435	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304290	9304435	.	+	2	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304436	9304530	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000328:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304531	9304623	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304531	9304593	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9304591	9304593	.	+	0	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000328;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304624	9305317	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000328:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9305318	9305529	.	+	.	source_transcript=hg002_chrY_paternal_228.2;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_208.2;transcript_id=NA19317_ch_T0000328;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000328;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000328:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9302732	9305529	9980	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_G0000118;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=NA19317_ch_T0000329;Name=TSPY10
NA19317_chrY	CAT	exon	9302732	9303263	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9302778	9303263	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000329:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9302778	9302780	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000329;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303264	9303870	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000329:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9303871	9303948	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9303871	9303948	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000329:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303949	9304076	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000329:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304077	9304188	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304077	9304188	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000329:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304189	9304296	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000329:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304297	9304435	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304297	9304435	.	+	2	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000329:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304436	9304541	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000329:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304542	9304623	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9304542	9304593	.	+	1	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000329:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9304591	9304593	.	+	0	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000329;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304624	9305317	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000329:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9305318	9305529	.	+	.	source_transcript=hg002_chrY_paternal_228.3;source_transcript_name=hg002_chrY_paternal_228.4;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_228.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_208.3;transcript_id=NA19317_ch_T0000329;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000329;transcript_name=hg002_chrY_paternal_228.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000329:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9302732	9305529	1000	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_G0000118;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=NA19317_ch_T0000330;Name=TSPY10
NA19317_chrY	CAT	exon	9302732	9303263	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303264	9303870	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000330:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9303871	9303948	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9303949	9304076	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000330:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304077	9304188	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304189	9304296	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000330:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304297	9304435	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304436	9304530	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000330:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9304531	9304623	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9304624	9305317	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000330:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9305318	9305529	.	+	.	source_transcript=hg002_chrY_paternal_228.4;source_transcript_name=hg002_chrY_paternal_228.1;source_gene=hg002_chrY_paternal_228;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_228;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_228.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_228.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_208.4;transcript_id=NA19317_ch_T0000330;gene_id=NA19317_ch_G0000118;Parent=NA19317_ch_T0000330;transcript_name=hg002_chrY_paternal_228.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000330:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9314810	9320500	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_165;alternative_source_transcripts=hg002_chrY_paternal_209.1;gene_id=NA19317_ch_G0000119;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000119;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9314810	9320500	1000	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_G0000119;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000331;Name=FAM197Y2
NA19317_chrY	CAT	exon	9314810	9314869	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000331:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9314870	9318420	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000331:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9318421	9318579	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000331:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9318580	9320077	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000331:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9320078	9320223	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000331:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9320224	9320309	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000331:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9320310	9320500	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_209.1;transcript_id=NA19317_ch_T0000331;gene_id=NA19317_ch_G0000119;Parent=NA19317_ch_T0000331;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000331:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9323025	9325821	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;gene_id=NA19317_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000120;Name=TSPY1
NA19317_chrY	CAT	transcript	9323025	9325821	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_G0000120;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19317_ch_T0000332;Name=TSPY1
NA19317_chrY	CAT	exon	9323025	9323556	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9323071	9323556	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9323071	9323073	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323557	9324163	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324164	9324241	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324164	9324241	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324242	9324369	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324370	9324481	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324370	9324481	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324482	9324582	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324583	9324728	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324583	9324728	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324729	9324834	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324835	9324916	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324835	9324916	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324917	9325610	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9325611	9325821	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9325611	9325633	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9325631	9325633	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_210.1;transcript_id=NA19317_ch_T0000332;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9323025	9325821	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_G0000120;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19317_ch_T0000333;Name=TSPY1
NA19317_chrY	CAT	exon	9323025	9323556	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9323071	9323556	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9323071	9323073	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323557	9324163	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324164	9324241	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324164	9324241	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324242	9324369	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324370	9324481	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324370	9324481	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324482	9324582	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324583	9324728	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324583	9324728	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324729	9324823	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324824	9324916	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324824	9324886	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9324884	9324886	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324917	9325610	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9325611	9325821	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_210.2;transcript_id=NA19317_ch_T0000333;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000333:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9323025	9325821	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_G0000120;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19317_ch_T0000334;Name=TSPY1
NA19317_chrY	CAT	exon	9323025	9323556	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9323071	9323556	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9323071	9323073	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323557	9324163	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324164	9324241	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324164	9324241	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324242	9324369	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324370	9324481	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324370	9324481	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324482	9324589	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324590	9324728	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324590	9324728	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324729	9324834	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324835	9324916	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324835	9324886	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9324884	9324886	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324917	9325610	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9325611	9325821	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.3;transcript_id=NA19317_ch_T0000334;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9323025	9325821	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_G0000120;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=NA19317_ch_T0000335;Name=TSPY1
NA19317_chrY	CAT	exon	9323025	9323157	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9323071	9323157	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9323071	9323073	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000335;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323158	9323418	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9323419	9323556	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9323419	9323556	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323557	9324163	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324164	9324241	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324164	9324241	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324242	9324369	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324370	9324481	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324370	9324481	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324482	9324582	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324583	9324728	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324583	9324728	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324729	9324834	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324835	9324916	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9324835	9324916	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324917	9325610	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9325611	9325821	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000335:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9325611	9325633	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000335:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9325631	9325633	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=NA19317_ch_T0000335;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000335;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000335;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9323025	9325821	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_G0000120;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=NA19317_ch_T0000336;Name=TSPY1
NA19317_chrY	CAT	exon	9323025	9323556	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9323557	9324163	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000336:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324164	9324241	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324242	9324369	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000336:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324370	9324481	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324482	9324589	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000336:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324590	9324728	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324729	9324823	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000336:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9324824	9324916	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9324917	9325610	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000336:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9325611	9325821	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_206.4;transcript_id=NA19317_ch_T0000336;gene_id=NA19317_ch_G0000120;Parent=NA19317_ch_T0000336;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000336:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9335098	9340786	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_207.1;gene_id=NA19317_ch_G0000121;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000121;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9335098	9340786	1000	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_G0000121;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000337;Name=FAM197Y2
NA19317_chrY	CAT	exon	9335098	9335157	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000337:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9335158	9338706	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000337:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9338707	9338865	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000337:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9338866	9340363	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000337:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9340364	9340509	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000337:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9340510	9340595	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000337:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9340596	9340786	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_207.1;transcript_id=NA19317_ch_T0000337;gene_id=NA19317_ch_G0000121;Parent=NA19317_ch_T0000337;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000337:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9343310	9346124	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_222;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;gene_id=NA19317_ch_G0000122;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=NA19317_ch_G0000122;Name=TSPY4
NA19317_chrY	CAT	transcript	9343310	9346124	100	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_G0000122;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=NA19317_ch_T0000338;Name=TSPY4
NA19317_chrY	CAT	exon	9343310	9343859	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9343356	9343859	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9343356	9343358	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000338;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9343860	9344466	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344467	9344544	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344467	9344544	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344545	9344672	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344673	9344784	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344673	9344784	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344785	9344885	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344886	9345031	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344886	9345031	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345032	9345137	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345138	9345219	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9345138	9345219	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345220	9345913	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345914	9346124	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000338:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9345914	9345936	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000338:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9345934	9345936	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.1,hg002_chrY_paternal_212.1;transcript_id=NA19317_ch_T0000338;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000338;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9343310	9346124	100	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_G0000122;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=NA19317_ch_T0000339;Name=TSPY4
NA19317_chrY	CAT	exon	9343310	9343859	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9343356	9343859	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9343356	9343358	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000339;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9343860	9344466	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344467	9344544	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344467	9344544	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344545	9344672	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344673	9344784	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344673	9344784	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344785	9344885	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344886	9345031	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344886	9345031	.	+	2	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345032	9345126	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345127	9345219	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9345127	9345189	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9345187	9345189	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000339;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345220	9345913	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345914	9346124	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.2,hg002_chrY_paternal_212.2;transcript_id=NA19317_ch_T0000339;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000339:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9343310	9346124	100	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_G0000122;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=NA19317_ch_T0000340;Name=TSPY4
NA19317_chrY	CAT	exon	9343310	9343859	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9343356	9343859	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000340:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9343356	9343358	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:NA19317_ch_T0000340;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9343860	9344466	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000340:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344467	9344544	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344467	9344544	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000340:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344545	9344672	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000340:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344673	9344784	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344673	9344784	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000340:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344785	9344892	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000340:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344893	9345031	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9344893	9345031	.	+	2	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000340:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345032	9345137	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000340:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345138	9345219	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9345138	9345189	.	+	1	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:NA19317_ch_T0000340:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9345187	9345189	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:NA19317_ch_T0000340;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345220	9345913	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:NA19317_ch_T0000340:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345914	9346124	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.3,hg002_chrY_paternal_212.3;transcript_id=NA19317_ch_T0000340;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000340;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:NA19317_ch_T0000340:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9343310	9346124	1000	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_G0000122;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=NA19317_ch_T0000341;Name=TSPY4
NA19317_chrY	CAT	exon	9343310	9343859	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9343860	9344466	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000341:0;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344467	9344544	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344545	9344672	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000341:1;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344673	9344784	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9344785	9344892	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000341:2;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9344893	9345031	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345032	9345126	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000341:3;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345127	9345219	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9345220	9345913	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:NA19317_ch_T0000341:4;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9345914	9346124	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_212.4;transcript_id=NA19317_ch_T0000341;gene_id=NA19317_ch_G0000122;Parent=NA19317_ch_T0000341;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:NA19317_ch_T0000341:5;Name=TSPY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9355417	9361005	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;gene_id=NA19317_ch_G0000123;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=NA19317_ch_G0000123;Name=FAM197Y4
NA19317_chrY	CAT	transcript	9355417	9361005	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_G0000123;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=NA19317_ch_T0000342;Name=FAM197Y4
NA19317_chrY	CAT	exon	9355417	9355476	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19317_ch_T0000342:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9355477	9359025	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19317_ch_T0000342:0;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9359026	9359184	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19317_ch_T0000342:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9359185	9360671	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19317_ch_T0000342:1;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9360672	9360817	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19317_ch_T0000342:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9360818	9360903	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:NA19317_ch_T0000342:2;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9360904	9361005	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=NA19317_ch_T0000342;gene_id=NA19317_ch_G0000123;Parent=NA19317_ch_T0000342;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:NA19317_ch_T0000342:3;Name=FAM197Y4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9375702	9381311	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;alternative_source_transcripts=hg002_chrY_paternal_211.1;gene_id=NA19317_ch_G0000124;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000124;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9375702	9381311	1000	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_G0000124;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000343;Name=FAM197Y3
NA19317_chrY	CAT	exon	9375702	9375761	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000343:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9375762	9379312	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000343:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9379313	9379471	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000343:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9379472	9380977	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000343:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9380978	9381123	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000343:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9381124	9381209	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000343:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9381210	9381311	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_211.1;transcript_id=NA19317_ch_T0000343;gene_id=NA19317_ch_G0000124;Parent=NA19317_ch_T0000343;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000343:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9383920	9386716	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_212;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;gene_id=NA19317_ch_G0000125;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000125;Name=TSPY10
NA19317_chrY	CAT	transcript	9383920	9386716	100	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_G0000125;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19317_ch_T0000344;Name=TSPY10
NA19317_chrY	CAT	exon	9383920	9384451	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9383966	9384451	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9383966	9383968	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000344;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9384452	9385058	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000344:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385059	9385136	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385059	9385136	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385137	9385264	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000344:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385265	9385376	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385265	9385376	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385377	9385477	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000344:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385478	9385623	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385478	9385623	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385624	9385729	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000344:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385730	9385811	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385730	9385811	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385812	9386505	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000344:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9386506	9386716	.	+	.	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000344:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9386506	9386528	.	+	2	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000344:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9386526	9386528	.	+	0	source_transcript=hg002_chrY_paternal_212.1;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.1,hg002_chrY_paternal_216.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000344;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000344;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000344;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9383920	9386716	100	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_G0000125;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19317_ch_T0000345;Name=TSPY10
NA19317_chrY	CAT	exon	9383920	9384451	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9383966	9384451	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000345:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9383966	9383968	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000345;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9384452	9385058	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000345:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385059	9385136	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385059	9385136	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000345:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385137	9385264	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000345:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385265	9385376	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385265	9385376	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000345:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385377	9385477	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000345:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385478	9385623	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385478	9385623	.	+	2	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000345:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385624	9385718	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000345:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385719	9385811	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385719	9385781	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000345:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9385779	9385781	.	+	0	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000345;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385812	9386505	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000345:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9386506	9386716	.	+	.	source_transcript=hg002_chrY_paternal_212.2;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.2,hg002_chrY_paternal_216.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000345;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000345;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000345:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9383920	9386716	100	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_G0000125;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=NA19317_ch_T0000346;Name=TSPY10
NA19317_chrY	CAT	exon	9383920	9384451	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9383966	9384451	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9383966	9383968	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000346;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9384452	9385058	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000346:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385059	9385136	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385059	9385136	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385137	9385264	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000346:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385265	9385376	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385265	9385376	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385377	9385484	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000346:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385485	9385623	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385485	9385623	.	+	2	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385624	9385729	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000346:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385730	9385811	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9385730	9385781	.	+	1	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9385779	9385781	.	+	0	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000346;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385812	9386505	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000346:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9386506	9386716	.	+	.	source_transcript=hg002_chrY_paternal_212.3;source_transcript_name=hg002_chrY_paternal_212.4;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_212.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.3,hg002_chrY_paternal_216.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000346;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000346;transcript_name=hg002_chrY_paternal_212.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000346:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9383920	9386716	1000	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_G0000125;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=NA19317_ch_T0000347;Name=TSPY10
NA19317_chrY	CAT	exon	9383920	9384451	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9384452	9385058	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000347:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385059	9385136	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385137	9385264	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000347:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385265	9385376	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385377	9385484	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000347:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385485	9385623	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385624	9385718	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000347:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9385719	9385811	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9385812	9386505	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000347:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9386506	9386716	.	+	.	source_transcript=hg002_chrY_paternal_212.4;source_transcript_name=hg002_chrY_paternal_212.1;source_gene=hg002_chrY_paternal_212;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_212;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_212.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_212.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_212.4,hg002_chrY_paternal_216.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000347;gene_id=NA19317_ch_G0000125;Parent=NA19317_ch_T0000347;transcript_name=hg002_chrY_paternal_212.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000347:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9395993	9401686	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;alternative_source_transcripts=hg002_chrY_paternal_213.1;gene_id=NA19317_ch_G0000126;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000126;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9395993	9401686	1000	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_G0000126;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000348;Name=FAM197Y2
NA19317_chrY	CAT	exon	9395993	9396052	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000348:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9396053	9399602	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000348:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9399603	9399761	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000348:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9399762	9401263	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000348:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9401264	9401409	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000348:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9401410	9401495	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000348:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9401496	9401686	.	-	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_213.1;transcript_id=NA19317_ch_T0000348;gene_id=NA19317_ch_G0000126;Parent=NA19317_ch_T0000348;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000348:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9404210	9407007	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;gene_id=NA19317_ch_G0000127;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=NA19317_ch_G0000127;Name=TSPY1
NA19317_chrY	CAT	transcript	9404210	9407007	9930	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_G0000127;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=NA19317_ch_T0000349;Name=TSPY1
NA19317_chrY	CAT	exon	9404210	9404342	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9404256	9404342	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9404256	9404258	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000349;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9404343	9404603	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9404604	9404741	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9404604	9404741	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9404742	9405348	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9405349	9405426	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9405349	9405426	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9405427	9405554	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9405555	9405666	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9405555	9405666	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9405667	9405767	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9405768	9405913	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9405768	9405913	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9405914	9406019	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9406020	9406101	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9406020	9406101	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9406102	9406795	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000349:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9406796	9407007	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000349:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9406796	9406818	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000349:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9406816	9406818	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000349;gene_id=NA19317_ch_G0000127;Parent=NA19317_ch_T0000349;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000349;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9416309	9421991	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;gene_id=NA19317_ch_G0000128;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000128;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9416309	9421991	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_G0000128;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000350;Name=FAM197Y2
NA19317_chrY	CAT	exon	9416309	9416368	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000350:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9416369	9419915	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000350:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9419916	9420074	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000350:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9420075	9421568	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000350:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9421569	9421714	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000350:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9421715	9421800	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000350:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9421801	9421991	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_215.1,hg002_chrY_paternal_219.1;transcript_id=NA19317_ch_T0000350;gene_id=NA19317_ch_G0000128;Parent=NA19317_ch_T0000350;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000350:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9424516	9427312	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;gene_id=NA19317_ch_G0000129;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=NA19317_ch_G0000129;Name=TSPY1
NA19317_chrY	CAT	transcript	9424516	9427312	10000	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_G0000129;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19317_ch_T0000351;Name=TSPY1
NA19317_chrY	CAT	exon	9424516	9425047	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9424562	9425047	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9424562	9424564	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000351;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425048	9425654	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425655	9425732	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425655	9425732	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425733	9425860	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425861	9425972	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425861	9425972	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425973	9426073	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426074	9426219	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426074	9426219	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426220	9426325	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426326	9426407	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426326	9426407	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426408	9427101	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9427102	9427312	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9427102	9427124	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9427122	9427124	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.1,hg002_chrY_paternal_220.3;transcript_id=NA19317_ch_T0000351;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000351;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000351;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9424516	9427312	10000	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_G0000129;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19317_ch_T0000352;Name=TSPY1
NA19317_chrY	CAT	exon	9424516	9425047	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9424562	9425047	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9424562	9424564	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000352;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425048	9425654	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000352:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425655	9425732	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425655	9425732	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425733	9425860	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000352:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425861	9425972	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425861	9425972	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425973	9426073	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000352:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426074	9426219	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426074	9426219	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426220	9426314	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000352:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426315	9426407	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426315	9426377	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9426375	9426377	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000352;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426408	9427101	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000352:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9427102	9427312	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.2,hg002_chrY_paternal_220.1;transcript_id=NA19317_ch_T0000352;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000352;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000352:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9424516	9427312	10000	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_G0000129;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19317_ch_T0000353;Name=TSPY1
NA19317_chrY	CAT	exon	9424516	9425047	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9424562	9425047	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9424562	9424564	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000353;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425048	9425654	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000353:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425655	9425732	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425655	9425732	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425733	9425860	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000353:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425861	9425972	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425861	9425972	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425973	9426080	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000353:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426081	9426219	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426081	9426219	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426220	9426325	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000353:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426326	9426407	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426326	9426377	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9426375	9426377	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000353;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426408	9427101	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000353:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9427102	9427312	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.3,hg002_chrY_paternal_220.4;transcript_id=NA19317_ch_T0000353;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000353;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000353:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9424516	9427312	10000	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_G0000129;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=NA19317_ch_T0000354;Name=TSPY1
NA19317_chrY	CAT	exon	9424516	9424648	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9424562	9424648	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9424562	9424564	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000354;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9424649	9424909	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9424910	9425047	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9424910	9425047	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425048	9425654	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425655	9425732	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425655	9425732	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425733	9425860	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425861	9425972	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9425861	9425972	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425973	9426073	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426074	9426219	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426074	9426219	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426220	9426325	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426326	9426407	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9426326	9426407	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426408	9427101	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000354:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9427102	9427312	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000354:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9427102	9427124	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000354:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9427122	9427124	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=NA19317_ch_T0000354;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000354;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000354;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9424516	9427312	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_G0000129;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=NA19317_ch_T0000355;Name=TSPY1
NA19317_chrY	CAT	exon	9424516	9425047	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425048	9425654	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000355:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425655	9425732	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425733	9425860	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000355:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9425861	9425972	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9425973	9426080	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000355:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426081	9426219	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426220	9426314	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000355:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9426315	9426407	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9426408	9427101	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:NA19317_ch_T0000355:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9427102	9427312	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_216.4,hg002_chrY_paternal_220.5;transcript_id=NA19317_ch_T0000355;gene_id=NA19317_ch_G0000129;Parent=NA19317_ch_T0000355;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:NA19317_ch_T0000355:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9436599	9442283	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;alternative_source_transcripts=hg002_chrY_paternal_221.1;gene_id=NA19317_ch_G0000130;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000130;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9436599	9442283	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_G0000130;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000356;Name=FAM197Y2
NA19317_chrY	CAT	exon	9436599	9436658	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000356:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9436659	9440207	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000356:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9440208	9440366	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000356:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9440367	9441860	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000356:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9441861	9442006	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000356:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9442007	9442092	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000356:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9442093	9442283	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1;transcript_id=NA19317_ch_T0000356;gene_id=NA19317_ch_G0000130;Parent=NA19317_ch_T0000356;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000356:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9444807	9447603	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;gene_id=NA19317_ch_G0000131;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=NA19317_ch_G0000131;Name=TSPY10
NA19317_chrY	CAT	transcript	9444807	9447603	100	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_G0000131;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19317_ch_T0000357;Name=TSPY10
NA19317_chrY	CAT	exon	9444807	9445338	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9444853	9445338	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9444853	9444855	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000357;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9445339	9445945	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000357:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9445946	9446023	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9445946	9446023	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446024	9446151	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000357:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446152	9446263	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446152	9446263	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446264	9446364	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000357:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446365	9446510	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446365	9446510	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446511	9446616	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000357:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446617	9446698	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446617	9446698	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446699	9447392	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000357:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9447393	9447603	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000357:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9447393	9447415	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000357:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9447413	9447415	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.1,hg002_chrY_paternal_222.1;transcript_id=NA19317_ch_T0000357;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000357;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000357;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9444807	9447603	100	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_G0000131;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19317_ch_T0000358;Name=TSPY10
NA19317_chrY	CAT	exon	9444807	9445338	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9444853	9445338	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000358:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9444853	9444855	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000358;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9445339	9445945	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000358:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9445946	9446023	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9445946	9446023	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000358:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446024	9446151	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000358:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446152	9446263	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446152	9446263	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000358:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446264	9446364	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000358:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446365	9446510	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446365	9446510	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000358:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446511	9446605	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000358:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446606	9446698	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446606	9446668	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000358:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9446666	9446668	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000358;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446699	9447392	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000358:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9447393	9447603	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.2,hg002_chrY_paternal_222.2;transcript_id=NA19317_ch_T0000358;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000358;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000358:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9444807	9447603	100	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_G0000131;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=NA19317_ch_T0000359;Name=TSPY10
NA19317_chrY	CAT	exon	9444807	9445338	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9444853	9445338	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000359:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9444853	9444855	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000359;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9445339	9445945	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000359:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9445946	9446023	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9445946	9446023	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000359:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446024	9446151	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000359:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446152	9446263	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446152	9446263	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000359:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446264	9446371	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000359:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446372	9446510	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446372	9446510	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000359:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446511	9446616	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000359:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446617	9446698	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9446617	9446668	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000359:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9446666	9446668	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000359;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446699	9447392	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000359:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9447393	9447603	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.3,hg002_chrY_paternal_222.3;transcript_id=NA19317_ch_T0000359;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000359;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000359:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9444807	9447603	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_G0000131;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=NA19317_ch_T0000360;Name=TSPY10
NA19317_chrY	CAT	exon	9444807	9445338	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9445339	9445945	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000360:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9445946	9446023	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446024	9446151	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000360:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446152	9446263	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446264	9446371	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000360:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446372	9446510	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446511	9446605	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000360:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9446606	9446698	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9446699	9447392	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000360:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9447393	9447603	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_218.4,hg002_chrY_paternal_222.4;transcript_id=NA19317_ch_T0000360;gene_id=NA19317_ch_G0000131;Parent=NA19317_ch_T0000360;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000360:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9456874	9462474	.	-	.	source_gene_common_name=FAM197Y8;source_gene=hg002_chrY_paternal_161;gene_id=NA19317_ch_G0000132;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=NA19317_ch_G0000132;Name=FAM197Y8
NA19317_chrY	CAT	transcript	9456874	9462474	1000	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_G0000132;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=NA19317_ch_T0000361;Name=FAM197Y8
NA19317_chrY	CAT	exon	9456874	9456933	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:NA19317_ch_T0000361:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9456934	9460483	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:NA19317_ch_T0000361:0;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9460484	9460642	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:NA19317_ch_T0000361:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9460643	9462140	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:NA19317_ch_T0000361:1;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9462141	9462286	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:NA19317_ch_T0000361:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9462287	9462372	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:NA19317_ch_T0000361:2;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9462373	9462474	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=NA19317_ch_T0000361;gene_id=NA19317_ch_G0000132;Parent=NA19317_ch_T0000361;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:NA19317_ch_T0000361:3;Name=FAM197Y8;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9465122	9467883	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;gene_id=NA19317_ch_G0000133;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap,transMap_pairwise;ID=NA19317_ch_G0000133;Name=TSPY1
NA19317_chrY	CAT	transcript	9465122	9467883	1000	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_G0000133;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19317_ch_T0000362;Name=TSPY1
NA19317_chrY	CAT	exon	9465122	9465618	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9465133	9465618	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9465133	9465135	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000362;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465619	9466225	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466226	9466303	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466226	9466303	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466304	9466431	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466432	9466543	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466432	9466543	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466544	9466644	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466645	9466790	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466645	9466790	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466791	9466885	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466886	9466978	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466886	9466948	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9466946	9466948	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000362;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466979	9467672	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9467673	9467883	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=296.662;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000362;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000362;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000362:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9465122	9467883	1000	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_G0000133;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19317_ch_T0000363;Name=TSPY1
NA19317_chrY	CAT	exon	9465122	9465219	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9465133	9465219	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9465133	9465135	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000363;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465220	9465480	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9465481	9465618	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9465481	9465618	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465619	9466225	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466226	9466303	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466226	9466303	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466304	9466431	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466432	9466543	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466432	9466543	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466544	9466644	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466645	9466790	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466645	9466790	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466791	9466896	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466897	9466978	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466897	9466978	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466979	9467672	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000363:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9467673	9467883	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000363:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9467673	9467695	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000363:6;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9467693	9467695	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=295.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000363;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000363;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000363;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9465122	9467883	1000	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_G0000133;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19317_ch_T0000364;Name=TSPY1
NA19317_chrY	CAT	exon	9465122	9465618	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9465133	9465618	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9465133	9465135	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000364;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465619	9466225	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466226	9466303	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466226	9466303	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466304	9466431	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466432	9466543	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466432	9466543	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466544	9466644	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466645	9466790	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466645	9466790	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466791	9466896	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466897	9466978	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466897	9466978	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466979	9467672	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9467673	9467883	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000364:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9467673	9467695	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000364:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9467693	9467695	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=296.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000364;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000364;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9465122	9467883	1000	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_G0000133;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19317_ch_T0000365;Name=TSPY1
NA19317_chrY	CAT	exon	9465122	9465618	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9465133	9465618	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9465133	9465135	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:NA19317_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465619	9466225	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000365:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466226	9466303	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466226	9466303	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466304	9466431	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000365:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466432	9466543	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466432	9466543	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466544	9466651	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000365:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466652	9466790	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466652	9466790	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466791	9466896	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000365:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466897	9466978	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9466897	9466948	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:NA19317_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9466946	9466948	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:NA19317_ch_T0000365;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466979	9467672	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000365:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9467673	9467883	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=296.61;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000365;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000365;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000365:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9465122	9467883	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_G0000133;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=NA19317_ch_T0000366;Name=TSPY1
NA19317_chrY	CAT	exon	9465122	9465618	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9465619	9466225	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000366:0;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466226	9466303	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466304	9466431	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000366:1;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466432	9466543	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466544	9466651	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000366:2;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466652	9466790	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466791	9466885	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000366:3;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9466886	9466978	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9466979	9467672	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:NA19317_ch_T0000366:4;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9467673	9467883	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=296.642;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM,transMap_pairwise;transcript_id=NA19317_ch_T0000366;gene_id=NA19317_ch_G0000133;Parent=NA19317_ch_T0000366;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:NA19317_ch_T0000366:5;Name=TSPY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9477154	9482841	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_173;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=NA19317_ch_G0000134;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000134;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9477154	9482841	1000	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_G0000134;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000367;Name=FAM197Y2
NA19317_chrY	CAT	exon	9477154	9477213	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000367:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9477214	9480763	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000367:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9480764	9480922	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000367:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9480923	9482418	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000367:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9482419	9482564	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000367:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9482565	9482650	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000367:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9482651	9482841	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=NA19317_ch_T0000367;gene_id=NA19317_ch_G0000134;Parent=NA19317_ch_T0000367;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000367:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9485365	9488162	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;gene_id=NA19317_ch_G0000135;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000135;Name=TSPY10
NA19317_chrY	CAT	transcript	9485365	9488162	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_G0000135;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19317_ch_T0000368;Name=TSPY10
NA19317_chrY	CAT	exon	9485365	9485896	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9485411	9485896	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9485411	9485413	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9485897	9486503	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486504	9486581	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486504	9486581	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486582	9486709	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486710	9486821	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486710	9486821	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486822	9486922	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486923	9487068	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486923	9487068	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487069	9487174	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487175	9487256	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9487175	9487256	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487257	9487950	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487951	9488162	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000368:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9487951	9487973	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000368:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9487971	9487973	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000368;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9485365	9488162	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_G0000135;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19317_ch_T0000369;Name=TSPY10
NA19317_chrY	CAT	exon	9485365	9485896	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9485411	9485896	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9485411	9485413	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000369;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9485897	9486503	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486504	9486581	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486504	9486581	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486582	9486709	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486710	9486821	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486710	9486821	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486822	9486922	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486923	9487068	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486923	9487068	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487069	9487163	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487164	9487256	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9487164	9487226	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9487224	9487226	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000369;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487257	9487950	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487951	9488162	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000369;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000369;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000369:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9485365	9488162	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_G0000135;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=NA19317_ch_T0000370;Name=TSPY10
NA19317_chrY	CAT	exon	9485365	9485896	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9485411	9485896	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000370:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9485411	9485413	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000370;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9485897	9486503	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000370:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486504	9486581	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486504	9486581	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000370:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486582	9486709	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000370:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486710	9486821	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486710	9486821	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000370:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486822	9486929	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000370:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486930	9487068	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9486930	9487068	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000370:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487069	9487174	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000370:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487175	9487256	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9487175	9487226	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000370:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9487224	9487226	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000370;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487257	9487950	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000370:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487951	9488162	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000370;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000370;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000370:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9485365	9488162	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_G0000135;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=NA19317_ch_T0000371;Name=TSPY10
NA19317_chrY	CAT	exon	9485365	9485896	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9485897	9486503	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000371:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486504	9486581	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486582	9486709	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000371:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486710	9486821	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9486822	9486929	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000371:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9486930	9487068	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487069	9487163	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000371:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487164	9487256	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9487257	9487950	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000371:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9487951	9488162	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000371;gene_id=NA19317_ch_G0000135;Parent=NA19317_ch_T0000371;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000371:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9497460	9503149	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;gene_id=NA19317_ch_G0000136;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=NA19317_ch_G0000136;Name=FAM197Y2
NA19317_chrY	CAT	transcript	9497460	9503149	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_G0000136;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=NA19317_ch_T0000372;Name=FAM197Y2
NA19317_chrY	CAT	exon	9497460	9497519	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000372:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9497520	9501069	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000372:0;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9501070	9501228	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000372:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9501229	9502726	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000372:1;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9502727	9502872	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000372:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9502873	9502958	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:NA19317_ch_T0000372:2;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9502959	9503149	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=NA19317_ch_T0000372;gene_id=NA19317_ch_G0000136;Parent=NA19317_ch_T0000372;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:NA19317_ch_T0000372:3;Name=FAM197Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9505673	9508469	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;gene_id=NA19317_ch_G0000137;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000137;Name=TSPY10P
NA19317_chrY	CAT	transcript	9505673	9508469	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_G0000137;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19317_ch_T0000373;Name=TSPY10P
NA19317_chrY	CAT	exon	9505673	9506204	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9505719	9506204	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9505719	9505721	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19317_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506205	9506811	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9506812	9506889	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9506812	9506889	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506890	9507017	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507018	9507129	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507018	9507129	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507130	9507230	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507231	9507376	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507231	9507265	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9507263	9507265	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19317_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507377	9507482	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507483	9507564	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507565	9508258	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9508259	9508469	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000373;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000373:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9505673	9508469	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_G0000137;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19317_ch_T0000374;Name=TSPY10P
NA19317_chrY	CAT	exon	9505673	9506204	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9505719	9506204	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9505719	9505721	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19317_ch_T0000374;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506205	9506811	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9506812	9506889	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9506812	9506889	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506890	9507017	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507018	9507129	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507018	9507129	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507130	9507230	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507231	9507376	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507231	9507265	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9507263	9507265	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19317_ch_T0000374;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507377	9507471	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507472	9507564	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507565	9508258	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9508259	9508469	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000374;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000374:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9505673	9508469	1000	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_G0000137;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19317_ch_T0000375;Name=TSPY10P
NA19317_chrY	CAT	exon	9505673	9506204	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9505719	9506204	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000375:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9505719	9505721	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:NA19317_ch_T0000375;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506205	9506811	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000375:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9506812	9506889	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9506812	9506889	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000375:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506890	9507017	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000375:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507018	9507129	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507018	9507129	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000375:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507130	9507237	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000375:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507238	9507376	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507238	9507376	.	+	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000375:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507377	9507482	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000375:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507483	9507564	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9507483	9507534	.	+	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:NA19317_ch_T0000375:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9507532	9507534	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:NA19317_ch_T0000375;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507565	9508258	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000375:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9508259	9508469	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000375;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000375;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000375:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9505673	9508469	1000	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_G0000137;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=NA19317_ch_T0000376;Name=TSPY10P
NA19317_chrY	CAT	exon	9505673	9506204	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506205	9506811	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000376:0;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9506812	9506889	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9506890	9507017	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000376:1;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507018	9507129	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507130	9507237	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000376:2;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507238	9507376	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507377	9507471	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000376:3;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9507472	9507564	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9507565	9508258	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:NA19317_ch_T0000376:4;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9508259	9508469	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000376;gene_id=NA19317_ch_G0000137;Parent=NA19317_ch_T0000376;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:NA19317_ch_T0000376:5;Name=TSPY10P;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9517788	9523400	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;gene_id=NA19317_ch_G0000138;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000138;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9517788	9523400	1000	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_G0000138;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000377;Name=FAM197Y3
NA19317_chrY	CAT	exon	9517788	9517847	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000377:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9517848	9521396	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000377:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9521397	9521555	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000377:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9521556	9523066	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000377:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9523067	9523212	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000377:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9523213	9523298	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000377:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9523299	9523400	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=NA19317_ch_T0000377;gene_id=NA19317_ch_G0000138;Parent=NA19317_ch_T0000377;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000377:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9526010	9528806	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;gene_id=NA19317_ch_G0000139;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000139;Name=TSPY10
NA19317_chrY	CAT	transcript	9526010	9528806	100	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_G0000139;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=NA19317_ch_T0000378;Name=TSPY10
NA19317_chrY	CAT	exon	9526010	9526541	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9526056	9526541	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9526056	9526058	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9526542	9527148	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527149	9527226	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527149	9527226	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527227	9527354	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527355	9527466	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527355	9527466	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527467	9527567	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527568	9527713	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527568	9527713	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527714	9527819	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527820	9527901	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527820	9527901	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527902	9528595	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9528596	9528806	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000378:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9528596	9528618	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000378:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9528616	9528618	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000378;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9526010	9528806	100	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_G0000139;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=NA19317_ch_T0000379;Name=TSPY10
NA19317_chrY	CAT	exon	9526010	9526541	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9526056	9526541	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9526056	9526058	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000379;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9526542	9527148	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527149	9527226	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527149	9527226	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527227	9527354	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527355	9527466	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527355	9527466	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527467	9527567	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527568	9527713	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527568	9527713	.	+	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527714	9527808	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527809	9527901	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527809	9527871	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9527869	9527871	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000379;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527902	9528595	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9528596	9528806	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000379;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000379;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000379:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9526010	9528806	100	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_G0000139;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=NA19317_ch_T0000380;Name=TSPY10
NA19317_chrY	CAT	exon	9526010	9526541	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9526056	9526541	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000380:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9526056	9526058	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:NA19317_ch_T0000380;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9526542	9527148	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000380:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527149	9527226	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527149	9527226	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000380:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527227	9527354	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000380:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527355	9527466	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527355	9527466	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000380:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527467	9527574	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000380:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527575	9527713	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527575	9527713	.	+	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000380:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527714	9527819	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000380:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527820	9527901	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9527820	9527871	.	+	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:NA19317_ch_T0000380:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9527869	9527871	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:NA19317_ch_T0000380;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527902	9528595	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:NA19317_ch_T0000380:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9528596	9528806	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000380;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000380;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:NA19317_ch_T0000380:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9526010	9528806	1000	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_G0000139;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=NA19317_ch_T0000381;Name=TSPY10
NA19317_chrY	CAT	exon	9526010	9526541	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9526542	9527148	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000381:0;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527149	9527226	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527227	9527354	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000381:1;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527355	9527466	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527467	9527574	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000381:2;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527575	9527713	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527714	9527808	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000381:3;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9527809	9527901	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9527902	9528595	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:NA19317_ch_T0000381:4;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9528596	9528806	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000381;gene_id=NA19317_ch_G0000139;Parent=NA19317_ch_T0000381;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:NA19317_ch_T0000381:5;Name=TSPY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9538114	9543701	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;gene_id=NA19317_ch_G0000140;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=NA19317_ch_G0000140;Name=FAM197Y3
NA19317_chrY	CAT	transcript	9538114	9543701	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_G0000140;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=NA19317_ch_T0000382;Name=FAM197Y3
NA19317_chrY	CAT	exon	9538114	9538173	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000382:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9538174	9541719	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000382:0;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9541720	9541878	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000382:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9541879	9543367	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000382:1;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9543368	9543513	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000382:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9543514	9543599	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:NA19317_ch_T0000382:2;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9543600	9543701	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=NA19317_ch_T0000382;gene_id=NA19317_ch_G0000140;Parent=NA19317_ch_T0000382;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:NA19317_ch_T0000382:3;Name=FAM197Y3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9546314	9549126	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=NA19317_ch_G0000141;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000141;Name=TSPY9
NA19317_chrY	CAT	transcript	9546314	9549126	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_G0000141;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=NA19317_ch_T0000383;Name=TSPY9
NA19317_chrY	CAT	exon	9546314	9546863	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9546360	9546863	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9546360	9546362	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:NA19317_ch_T0000383;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9546864	9547470	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000383:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547471	9547548	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547471	9547548	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9547549	9547676	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000383:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547677	9547788	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547677	9547788	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9547789	9547889	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000383:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547890	9548035	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547890	9548035	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9548036	9548141	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000383:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9548142	9548223	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9548142	9548223	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9548224	9548915	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000383:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9548916	9549126	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000383:5;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9548916	9548938	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000383:5;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9548936	9548938	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000383;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000383;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:NA19317_ch_T0000383;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9546314	9549126	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_G0000141;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=NA19317_ch_T0000384;Name=TSPY9
NA19317_chrY	CAT	exon	9546314	9546863	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9546360	9546863	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000384:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9546360	9546362	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:NA19317_ch_T0000384;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9546864	9547470	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000384:0;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547471	9547548	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547471	9547548	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000384:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9547549	9547676	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000384:1;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547677	9547788	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547677	9547788	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000384:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9547789	9547889	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000384:2;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9547890	9548035	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9547890	9548035	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000384:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9548036	9548130	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000384:3;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9548131	9548223	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9548131	9548193	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:NA19317_ch_T0000384:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9548191	9548193	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:NA19317_ch_T0000384;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9548224	9548915	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:NA19317_ch_T0000384:4;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9548916	9549126	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000384;gene_id=NA19317_ch_G0000141;Parent=NA19317_ch_T0000384;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:NA19317_ch_T0000384:5;Name=TSPY9;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9629180	9633612	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=NA19317_ch_G0000142;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=NA19317_ch_G0000142;Name=RBMY3AP
NA19317_chrY	CAT	transcript	9629180	9633612	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_G0000142;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=NA19317_ch_T0000385;Name=RBMY3AP
NA19317_chrY	CAT	exon	9629180	9629330	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_T0000385;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19317_ch_T0000385:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9629331	9633240	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_T0000385;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:NA19317_ch_T0000385:0;Name=RBMY3AP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9633241	9633342	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_T0000385;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19317_ch_T0000385:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9633343	9633548	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_T0000385;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:NA19317_ch_T0000385:1;Name=RBMY3AP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9633549	9633612	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=NA19317_ch_T0000385;gene_id=NA19317_ch_G0000142;Parent=NA19317_ch_T0000385;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:NA19317_ch_T0000385:2;Name=RBMY3AP;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9709570	9712169	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=NA19317_ch_G0000143;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=NA19317_ch_G0000143;Name=TTTY8
NA19317_chrY	CAT	transcript	9709570	9712169	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_G0000143;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=NA19317_ch_T0000386;Name=TTTY8
NA19317_chrY	CAT	exon	9709570	9709705	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_T0000386;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19317_ch_T0000386:0;Name=TTTY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9709706	9710182	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_T0000386;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:NA19317_ch_T0000386:0;Name=TTTY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9710183	9710387	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_T0000386;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19317_ch_T0000386:1;Name=TTTY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9710388	9711979	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_T0000386;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:NA19317_ch_T0000386:1;Name=TTTY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9711980	9712169	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=NA19317_ch_T0000386;gene_id=NA19317_ch_G0000143;Parent=NA19317_ch_T0000386;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:NA19317_ch_T0000386:2;Name=TTTY8;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9725294	9733732	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=NA19317_ch_G0000144;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=NA19317_ch_G0000144;Name=TTTY7B
NA19317_chrY	CAT	transcript	9725294	9733732	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_G0000144;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=NA19317_ch_T0000387;Name=TTTY7B
NA19317_chrY	CAT	exon	9725294	9725539	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:0;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9725540	9727014	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19317_ch_T0000387:0;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9727015	9727128	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:1;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9727129	9729045	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19317_ch_T0000387:1;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9729046	9729522	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:2;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9729523	9730210	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19317_ch_T0000387:2;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9730211	9730285	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:3;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9730286	9732592	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19317_ch_T0000387:3;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9732593	9732754	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:4;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9732755	9733695	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:NA19317_ch_T0000387:4;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9733696	9733732	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=NA19317_ch_T0000387;gene_id=NA19317_ch_G0000144;Parent=NA19317_ch_T0000387;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:NA19317_ch_T0000387:5;Name=TTTY7B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9736123	9739766	.	-	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=NA19317_ch_G0000145;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=NA19317_ch_G0000145;Name=TTTY21
NA19317_chrY	CAT	transcript	9736123	9739766	1000	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=NA19317_ch_T0000388;gene_id=NA19317_ch_G0000145;Parent=NA19317_ch_G0000145;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=NA19317_ch_T0000388;Name=TTTY21
NA19317_chrY	CAT	exon	9736123	9736227	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=NA19317_ch_T0000388;gene_id=NA19317_ch_G0000145;Parent=NA19317_ch_T0000388;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:NA19317_ch_T0000388:0;Name=TTTY21;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9736228	9739564	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=NA19317_ch_T0000388;gene_id=NA19317_ch_G0000145;Parent=NA19317_ch_T0000388;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:NA19317_ch_T0000388:0;Name=TTTY21;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9739565	9739766	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=NA19317_ch_T0000388;gene_id=NA19317_ch_G0000145;Parent=NA19317_ch_T0000388;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:NA19317_ch_T0000388:1;Name=TTTY21;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9754757	9776958	.	+	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=NA19317_ch_G0000146;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=NA19317_ch_G0000146;Name=TTTY2
NA19317_chrY	CAT	transcript	9754757	9776958	1000	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_G0000146;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=NA19317_ch_T0000389;Name=TTTY2
NA19317_chrY	CAT	exon	9754757	9754961	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:0;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9754962	9760795	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:0;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9760796	9760873	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:1;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9760874	9763349	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:1;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9763350	9763436	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:2;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9763437	9770830	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:2;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9770831	9770979	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:3;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9770980	9771671	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:3;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9771672	9771828	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:4;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9771829	9774658	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:4;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9774659	9774737	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:5;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9774738	9774857	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:5;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9774858	9775055	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:6;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9775056	9776278	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:NA19317_ch_T0000389:6;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9776279	9776958	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=NA19317_ch_T0000389;gene_id=NA19317_ch_G0000146;Parent=NA19317_ch_T0000389;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:NA19317_ch_T0000389:7;Name=TTTY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9771638	9792801	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=NA19317_ch_G0000147;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=NA19317_ch_G0000147;Name=TTTY1B
NA19317_chrY	CAT	transcript	9771638	9792801	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_G0000147;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=NA19317_ch_T0000390;Name=TTTY1B
NA19317_chrY	CAT	exon	9771638	9771895	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19317_ch_T0000390:0;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9771896	9779476	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19317_ch_T0000390:0;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9779477	9779614	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19317_ch_T0000390:1;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9779615	9781970	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19317_ch_T0000390:1;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9781971	9782079	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19317_ch_T0000390:2;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9782080	9788942	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19317_ch_T0000390:2;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9788943	9789102	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19317_ch_T0000390:3;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9789103	9792526	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:NA19317_ch_T0000390:3;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9792527	9792801	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=NA19317_ch_T0000390;gene_id=NA19317_ch_G0000147;Parent=NA19317_ch_T0000390;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:NA19317_ch_T0000390:4;Name=TTTY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9813282	9816693	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;gene_id=NA19317_ch_G0000148;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=NA19317_ch_G0000148;Name=LOC107987353
NA19317_chrY	CAT	transcript	9813282	9816693	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_G0000148;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=NA19317_ch_T0000391;Name=LOC107987353
NA19317_chrY	CAT	exon	9813282	9813450	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_T0000391;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19317_ch_T0000391:0;Name=LOC107987353;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9813451	9813826	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_T0000391;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:NA19317_ch_T0000391:0;Name=LOC107987353;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9813827	9813899	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_T0000391;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19317_ch_T0000391:1;Name=LOC107987353;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9813900	9816430	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_T0000391;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:NA19317_ch_T0000391:1;Name=LOC107987353;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9816431	9816693	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=NA19317_ch_T0000391;gene_id=NA19317_ch_G0000148;Parent=NA19317_ch_T0000391;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:NA19317_ch_T0000391:2;Name=LOC107987353;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9821789	9825987	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=NA19317_ch_G0000149;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=NA19317_ch_G0000149;Name=LINC00280
NA19317_chrY	CAT	transcript	9821789	9825987	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_G0000149;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=NA19317_ch_T0000392;Name=LINC00280
NA19317_chrY	CAT	exon	9821789	9821874	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_T0000392;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000392:0;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9821875	9824375	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_T0000392;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:NA19317_ch_T0000392:0;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9824376	9824518	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_T0000392;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000392:1;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9824519	9825768	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_T0000392;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:NA19317_ch_T0000392:1;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9825769	9825987	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=NA19317_ch_T0000392;gene_id=NA19317_ch_G0000149;Parent=NA19317_ch_T0000392;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:NA19317_ch_T0000392:2;Name=LINC00280;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9919310	9924915	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;gene_id=NA19317_ch_G0000150;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=NA19317_ch_G0000150;Name=FAM197Y9
NA19317_chrY	CAT	transcript	9919310	9924915	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_G0000150;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=NA19317_ch_T0000393;Name=FAM197Y9
NA19317_chrY	CAT	exon	9919310	9919411	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19317_ch_T0000393:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9919412	9919497	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19317_ch_T0000393:0;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9919498	9919643	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19317_ch_T0000393:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9919644	9921145	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19317_ch_T0000393:1;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9921146	9921304	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19317_ch_T0000393:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9921305	9924855	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:NA19317_ch_T0000393:2;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9924856	9924915	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=NA19317_ch_T0000393;gene_id=NA19317_ch_G0000150;Parent=NA19317_ch_T0000393;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:NA19317_ch_T0000393:3;Name=FAM197Y9;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9934236	9937031	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;gene_id=NA19317_ch_G0000151;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000151;Name=TSPY2
NA19317_chrY	CAT	transcript	9934236	9937031	100	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_G0000151;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19317_ch_T0000394;Name=TSPY2
NA19317_chrY	CAT	exon	9934236	9934451	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9934429	9934451	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9934429	9934431	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19317_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9934452	9935145	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935146	9935227	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935146	9935227	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935228	9935333	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935334	9935479	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935334	9935479	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935480	9935580	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935581	9935692	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935581	9935692	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935693	9935820	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935821	9935898	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935821	9935898	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935899	9936499	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9936500	9937031	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000394:5;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9936500	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000394:5;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9936983	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000394;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19317_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9934236	9937031	100	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_G0000151;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19317_ch_T0000395;Name=TSPY2
NA19317_chrY	CAT	exon	9934236	9934451	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9934452	9935145	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935146	9935238	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935176	9935238	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9935176	9935178	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19317_ch_T0000395;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935239	9935333	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935334	9935479	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935334	9935479	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935480	9935580	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935581	9935692	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935581	9935692	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935693	9935820	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935821	9935898	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935821	9935898	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935899	9936499	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9936500	9937031	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000395:5;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9936500	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9936983	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000395;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000395;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19317_ch_T0000395;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9934236	9937031	100	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_G0000151;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=NA19317_ch_T0000396;Name=TSPY2
NA19317_chrY	CAT	exon	9934236	9934451	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9934452	9935145	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000396:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935146	9935227	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935176	9935227	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000396:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	9935176	9935178	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:NA19317_ch_T0000396;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935228	9935333	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000396:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935334	9935472	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935334	9935472	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000396:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935473	9935580	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000396:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935581	9935692	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935581	9935692	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000396:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935693	9935820	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000396:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935821	9935898	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9935821	9935898	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000396:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935899	9936499	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:NA19317_ch_T0000396:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9936500	9937031	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:NA19317_ch_T0000396:5;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	9936500	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:NA19317_ch_T0000396:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	9936983	9936985	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000396;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000396;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:NA19317_ch_T0000396;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	9934236	9937031	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_G0000151;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=NA19317_ch_T0000397;Name=TSPY2
NA19317_chrY	CAT	exon	9934236	9934451	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9934452	9935145	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19317_ch_T0000397:0;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935146	9935238	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935239	9935333	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19317_ch_T0000397:1;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935334	9935472	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935473	9935580	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19317_ch_T0000397:2;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935581	9935692	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935693	9935820	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19317_ch_T0000397:3;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9935821	9935898	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9935899	9936499	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:NA19317_ch_T0000397:4;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9936500	9937031	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000397;gene_id=NA19317_ch_G0000151;Parent=NA19317_ch_T0000397;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:NA19317_ch_T0000397:5;Name=TSPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	9939644	9940808	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=NA19317_ch_G0000152;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=NA19317_ch_G0000152;Name=TTTY23B
NA19317_chrY	CAT	transcript	9939644	9940808	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_G0000152;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=NA19317_ch_T0000398;Name=TTTY23B
NA19317_chrY	CAT	exon	9939644	9939700	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_T0000398;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19317_ch_T0000398:0;Name=TTTY23B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9939701	9939813	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_T0000398;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:NA19317_ch_T0000398:0;Name=TTTY23B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9939814	9939959	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_T0000398;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19317_ch_T0000398:1;Name=TTTY23B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	9939960	9940499	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_T0000398;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:NA19317_ch_T0000398:1;Name=TTTY23B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	9940500	9940808	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=NA19317_ch_T0000398;gene_id=NA19317_ch_G0000152;Parent=NA19317_ch_T0000398;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:NA19317_ch_T0000398:2;Name=TTTY23B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	11743730	11746744	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=NA19317_ch_G0000153;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=NA19317_ch_G0000153;Name=LOC124904996
NA19317_chrY	CAT	transcript	11743730	11746744	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19317_ch_T0000399;gene_id=NA19317_ch_G0000153;Parent=NA19317_ch_G0000153;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=NA19317_ch_T0000399;Name=LOC124904996
NA19317_chrY	CAT	exon	11743730	11744995	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19317_ch_T0000399;gene_id=NA19317_ch_G0000153;Parent=NA19317_ch_T0000399;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:NA19317_ch_T0000399:0;Name=LOC124904996;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	11744996	11746322	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19317_ch_T0000399;gene_id=NA19317_ch_G0000153;Parent=NA19317_ch_T0000399;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:NA19317_ch_T0000399:0;Name=LOC124904996;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	11746323	11746744	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=NA19317_ch_T0000399;gene_id=NA19317_ch_G0000153;Parent=NA19317_ch_T0000399;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:NA19317_ch_T0000399:1;Name=LOC124904996;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	11829262	11837617	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=NA19317_ch_G0000154;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=NA19317_ch_G0000154;Name=LOC105379273
NA19317_chrY	CAT	transcript	11829262	11837617	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_G0000154;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=NA19317_ch_T0000400;Name=LOC105379273
NA19317_chrY	CAT	exon	11829262	11829303	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_T0000400;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19317_ch_T0000400:0;Name=LOC105379273;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	11829304	11835363	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_T0000400;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:NA19317_ch_T0000400:0;Name=LOC105379273;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	11835364	11835422	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_T0000400;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19317_ch_T0000400:1;Name=LOC105379273;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	11835423	11837557	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_T0000400;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:NA19317_ch_T0000400:1;Name=LOC105379273;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	11837558	11837617	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=NA19317_ch_T0000400;gene_id=NA19317_ch_G0000154;Parent=NA19317_ch_T0000400;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:NA19317_ch_T0000400:2;Name=LOC105379273;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	13721194	13728808	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=NA19317_ch_G0000155;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=NA19317_ch_G0000155;Name=LOC112268312
NA19317_chrY	CAT	transcript	13721194	13727745	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_G0000155;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000401;Name=LOC112268312
NA19317_chrY	CAT	exon	13721194	13721283	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721284	13721469	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13721470	13721631	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721632	13727609	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13727610	13727745	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000401;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000401:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	13721194	13728808	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_G0000155;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000402;Name=LOC112268312
NA19317_chrY	CAT	exon	13721194	13721283	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000402:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721284	13721469	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000402:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13721470	13721631	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000402:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721632	13727609	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000402:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13727610	13728808	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000402;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000402;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000402:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	13721317	13728808	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_G0000155;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000403;Name=LOC112268312
NA19317_chrY	CAT	exon	13721317	13721335	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000403;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000403:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721336	13721469	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000403;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000403:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13721470	13721631	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000403;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000403:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13721632	13727609	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000403;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000403:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13727610	13728808	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=NA19317_ch_T0000403;gene_id=NA19317_ch_G0000155;Parent=NA19317_ch_T0000403;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000403:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	13763990	13772924	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=NA19317_ch_G0000156;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=NA19317_ch_G0000156;Name=LOC107987343
NA19317_chrY	CAT	transcript	13763990	13772924	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_G0000156;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=NA19317_ch_T0000404;Name=LOC107987343
NA19317_chrY	CAT	exon	13763990	13765382	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_T0000404;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19317_ch_T0000404:0;Name=LOC107987343;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13765383	13767944	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_T0000404;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:NA19317_ch_T0000404:0;Name=LOC107987343;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13767945	13768071	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_T0000404;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19317_ch_T0000404:1;Name=LOC107987343;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13768072	13771028	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_T0000404;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:NA19317_ch_T0000404:1;Name=LOC107987343;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13771029	13772924	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=NA19317_ch_T0000404;gene_id=NA19317_ch_G0000156;Parent=NA19317_ch_T0000404;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:NA19317_ch_T0000404:2;Name=LOC107987343;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	13815519	13830993	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=NA19317_ch_G0000157;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=NA19317_ch_G0000157;Name=GYG2P1
NA19317_chrY	CAT	transcript	13815519	13830993	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_G0000157;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=NA19317_ch_T0000405;Name=GYG2P1
NA19317_chrY	CAT	exon	13815519	13815903	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19317_ch_T0000405:0;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13815904	13816198	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19317_ch_T0000405:0;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13816199	13816340	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19317_ch_T0000405:1;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13816341	13816595	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19317_ch_T0000405:1;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13816596	13816712	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19317_ch_T0000405:2;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13816713	13829718	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19317_ch_T0000405:2;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13829719	13829857	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19317_ch_T0000405:3;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	13829858	13830952	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:NA19317_ch_T0000405:3;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	13830953	13830993	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=NA19317_ch_T0000405;gene_id=NA19317_ch_G0000157;Parent=NA19317_ch_T0000405;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:NA19317_ch_T0000405:4;Name=GYG2P1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14070930	14073097	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=NA19317_ch_G0000158;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=NA19317_ch_G0000158;Name=LOC112268311
NA19317_chrY	CAT	transcript	14070930	14073097	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19317_ch_T0000406;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_G0000158;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=NA19317_ch_T0000406;Name=LOC112268311
NA19317_chrY	CAT	exon	14070930	14072365	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19317_ch_T0000406;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19317_ch_T0000406:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072366	14072974	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19317_ch_T0000406;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:NA19317_ch_T0000406:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14072975	14073097	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=NA19317_ch_T0000406;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000406;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19317_ch_T0000406:1;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14070930	14073106	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19317_ch_T0000407;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_G0000158;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=NA19317_ch_T0000407;Name=LOC112268311
NA19317_chrY	CAT	exon	14070930	14072365	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19317_ch_T0000407;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000407;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19317_ch_T0000407:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072366	14072917	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19317_ch_T0000407;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000407;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:NA19317_ch_T0000407:0;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14072918	14073106	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=NA19317_ch_T0000407;gene_id=NA19317_ch_G0000158;Parent=NA19317_ch_T0000407;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:NA19317_ch_T0000407:1;Name=LOC112268311;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14071966	14101842	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=NA19317_ch_G0000159;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=NA19317_ch_G0000159;Name=TTTY15
NA19317_chrY	CAT	transcript	14071966	14101842	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_G0000159;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19317_ch_T0000408;Name=TTTY15
NA19317_chrY	CAT	exon	14071966	14072320	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072321	14074253	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14074254	14074300	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14074301	14096121	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14096122	14096215	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000408:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14096216	14097072	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000408:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14097073	14101842	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=NA19317_ch_T0000408;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000408:3;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14071966	14101842	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_G0000159;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19317_ch_T0000409;Name=TTTY15
NA19317_chrY	CAT	exon	14071966	14072320	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072321	14096121	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14096122	14096215	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14096216	14097072	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14097073	14101842	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=NA19317_ch_T0000409;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000409:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14071966	14101842	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_G0000159;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19317_ch_T0000410;Name=TTTY15
NA19317_chrY	CAT	exon	14071966	14072320	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072321	14096121	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14096122	14096215	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14096216	14097293	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14097294	14101842	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=NA19317_ch_T0000410;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000410:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14071966	14101842	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_G0000159;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19317_ch_T0000411;Name=TTTY15
NA19317_chrY	CAT	exon	14071966	14072320	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072321	14074253	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000411:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14074254	14074300	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14074301	14096121	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000411:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14096122	14096215	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14096216	14097293	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000411:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14097294	14101842	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=NA19317_ch_T0000411;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000411;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000411:3;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14071966	14101842	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_G0000159;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=NA19317_ch_T0000412;Name=TTTY15
NA19317_chrY	CAT	exon	14071966	14072320	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000412:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14072321	14074253	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000412:0;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14074254	14074300	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000412:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14074301	14096121	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000412:1;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14096122	14096215	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000412:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14096216	14099934	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:NA19317_ch_T0000412:2;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14099935	14101842	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=NA19317_ch_T0000412;gene_id=NA19317_ch_G0000159;Parent=NA19317_ch_T0000412;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:NA19317_ch_T0000412:3;Name=TTTY15;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14110840	14270447	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=NA19317_ch_G0000160;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000160;Name=USP9Y
NA19317_chrY	CAT	transcript	14110840	14270447	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_G0000160;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19317_ch_T0000413;Name=USP9Y
NA19317_chrY	CAT	exon	14110840	14111664	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14111665	14118246	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14118247	14118306	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14118307	14119000	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14119001	14119156	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14119061	14119156	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	14119061	14119063	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19317_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14119157	14130201	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14130202	14130350	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14130202	14130350	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14130351	14131719	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14131720	14131799	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14131720	14131799	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14131800	14134724	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14134725	14134837	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14134725	14134837	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14134838	14136186	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14136187	14136405	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14136187	14136405	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14136406	14145223	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145224	14145339	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145224	14145339	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145340	14145609	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145610	14145861	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145610	14145861	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145862	14146022	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14146023	14146161	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14146023	14146161	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14146162	14147768	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14147769	14147921	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14147769	14147921	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14147922	14149136	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14149137	14149241	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14149137	14149241	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14149242	14166803	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14166804	14167010	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14166804	14167010	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14167011	14168117	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14168118	14168254	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14168118	14168254	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14168255	14170095	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14170096	14170229	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14170096	14170229	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14170230	14180679	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14180680	14180767	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14180680	14180767	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14180768	14183194	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14183195	14183537	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14183195	14183537	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14183538	14185082	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14185083	14185178	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14185083	14185178	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14185179	14186260	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14186261	14186472	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14186261	14186472	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14186473	14187630	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14187631	14187871	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14187631	14187871	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14187872	14188217	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14188218	14188367	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14188218	14188367	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14188368	14189137	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14189138	14189258	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14189138	14189258	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14189259	14195814	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14195815	14195945	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14195815	14195945	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14195946	14196132	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14196133	14196411	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14196133	14196411	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14196412	14200017	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14200018	14200143	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14200018	14200143	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14200144	14201109	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14201110	14201235	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14201110	14201235	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14201236	14202642	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14202643	14202812	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14202643	14202812	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14202813	14219790	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14219791	14219899	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14219791	14219899	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14219900	14220283	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14220284	14220430	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14220284	14220430	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14220431	14221246	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14221247	14221393	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14221247	14221393	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14221394	14222441	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14222442	14222664	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14222442	14222664	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14222665	14225735	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14225736	14225956	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14225736	14225956	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14225957	14228031	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14228032	14228222	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14228032	14228222	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14228223	14243295	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14243296	14243469	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14243296	14243469	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14243470	14247518	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14247519	14247660	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14247519	14247660	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14247661	14249471	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14249472	14250222	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14249472	14250222	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250223	14250617	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14250618	14250741	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14250618	14250741	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250742	14251847	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14251848	14252073	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14251848	14252073	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252074	14252671	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14252672	14252801	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14252672	14252801	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252802	14255940	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14255941	14256126	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14255941	14256126	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256127	14256540	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256541	14256761	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256541	14256761	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256762	14256846	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256847	14256935	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256847	14256935	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256936	14265947	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14265948	14266104	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14265948	14266104	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266105	14266240	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14266241	14266453	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14266241	14266453	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266454	14267173	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14267174	14267269	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:44;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14267174	14267269	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14267270	14268886	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000413:44;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14268887	14270447	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000413:45;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14268887	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	14269022	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000413;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19317_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14117466	14270447	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_G0000160;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19317_ch_T0000414;Name=USP9Y
NA19317_chrY	CAT	exon	14117466	14117494	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14117495	14118246	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14118247	14118306	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14118307	14119000	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14119001	14119156	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14119061	14119156	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	14119061	14119063	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19317_ch_T0000414;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14119157	14130201	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14130202	14130350	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14130202	14130350	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14130351	14131719	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14131720	14131799	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14131720	14131799	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14131800	14134724	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14134725	14134837	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14134725	14134837	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14134838	14136186	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14136187	14136405	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14136187	14136405	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14136406	14145223	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145224	14145339	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145224	14145339	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145340	14145609	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145610	14145861	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145610	14145861	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145862	14146022	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14146023	14146161	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14146023	14146161	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14146162	14147768	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14147769	14147921	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14147769	14147921	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14147922	14149136	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14149137	14149241	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14149137	14149241	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14149242	14166803	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14166804	14167010	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14166804	14167010	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14167011	14168117	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14168118	14168254	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14168118	14168254	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14168255	14170095	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14170096	14170229	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14170096	14170229	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14170230	14180679	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14180680	14180767	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14180680	14180767	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14180768	14183194	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14183195	14183537	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14183195	14183537	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14183538	14185082	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14185083	14185178	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14185083	14185178	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14185179	14186260	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14186261	14186472	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14186261	14186472	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14186473	14187630	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14187631	14187871	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14187631	14187871	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14187872	14188217	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14188218	14188367	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14188218	14188367	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14188368	14189137	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14189138	14189258	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14189138	14189258	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14189259	14195814	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14195815	14195945	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14195815	14195945	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14195946	14196132	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14196133	14196411	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14196133	14196411	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14196412	14200017	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14200018	14200143	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14200018	14200143	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14200144	14201109	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14201110	14201235	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14201110	14201235	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14201236	14202642	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14202643	14202812	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14202643	14202812	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14202813	14219790	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14219791	14219899	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14219791	14219899	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14219900	14220283	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14220284	14220430	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14220284	14220430	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14220431	14221246	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14221247	14221393	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14221247	14221393	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14221394	14222441	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14222442	14222664	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14222442	14222664	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14222665	14225735	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14225736	14225956	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14225736	14225956	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14225957	14228031	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14228032	14228222	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14228032	14228222	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14228223	14243295	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14243296	14243469	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14243296	14243469	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14243470	14247518	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14247519	14247660	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14247519	14247660	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14247661	14249471	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14249472	14250222	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14249472	14250222	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250223	14250617	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14250618	14250741	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14250618	14250741	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250742	14251847	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14251848	14252073	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14251848	14252073	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252074	14252671	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14252672	14252801	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14252672	14252801	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252802	14255940	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14255941	14256126	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14255941	14256126	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256127	14256540	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256541	14256761	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256541	14256761	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256762	14256846	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256847	14256935	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256847	14256935	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256936	14265947	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14265948	14266104	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14265948	14266104	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266105	14266240	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14266241	14266453	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14266241	14266453	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266454	14267173	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14267174	14267269	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:44;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14267174	14267269	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14267270	14268886	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000414:44;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14268887	14270447	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000414:45;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14268887	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000414:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	14269022	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000414;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000414;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19317_ch_T0000414;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14119069	14270447	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_G0000160;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=NA19317_ch_T0000415;Name=USP9Y
NA19317_chrY	CAT	exon	14119069	14119156	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14119157	14124251	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14124252	14124402	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14124403	14130201	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14130202	14130350	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14130340	14130350	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:0;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	14130340	14130342	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:NA19317_ch_T0000415;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14130351	14131719	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14131720	14131799	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14131720	14131799	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:1;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14131800	14134724	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14134725	14134837	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14134725	14134837	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:2;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14134838	14136186	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14136187	14136405	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14136187	14136405	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:3;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14136406	14145223	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145224	14145339	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145224	14145339	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:4;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145340	14145609	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14145610	14145861	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14145610	14145861	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:5;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14145862	14146022	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14146023	14146161	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14146023	14146161	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:6;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14146162	14147768	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14147769	14147921	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14147769	14147921	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:7;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14147922	14149136	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14149137	14149241	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14149137	14149241	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:8;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14149242	14166803	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14166804	14167010	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14166804	14167010	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:9;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14167011	14168117	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14168118	14168254	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14168118	14168254	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:10;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14168255	14170095	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14170096	14170229	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14170096	14170229	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:11;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14170230	14180679	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14180680	14180767	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14180680	14180767	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:12;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14180768	14183194	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14183195	14183537	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14183195	14183537	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:13;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14183538	14185082	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14185083	14185178	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14185083	14185178	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:14;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14185179	14186260	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14186261	14186472	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14186261	14186472	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:15;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14186473	14187630	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14187631	14187871	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14187631	14187871	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:16;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14187872	14188217	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14188218	14188367	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14188218	14188367	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:17;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14188368	14189137	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14189138	14189258	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14189138	14189258	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:18;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14189259	14195814	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14195815	14195945	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14195815	14195945	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:19;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14195946	14196132	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14196133	14196411	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14196133	14196411	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:20;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14196412	14200017	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14200018	14200143	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14200018	14200143	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:21;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14200144	14201109	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14201110	14201235	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14201110	14201235	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:22;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14201236	14202642	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14202643	14202812	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14202643	14202812	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:23;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14202813	14219790	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14219791	14219899	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14219791	14219899	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:24;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14219900	14220283	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14220284	14220430	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14220284	14220430	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:25;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14220431	14221246	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14221247	14221393	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14221247	14221393	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:26;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14221394	14222441	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14222442	14222664	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14222442	14222664	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:27;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14222665	14225735	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14225736	14225956	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14225736	14225956	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:28;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14225957	14228031	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14228032	14228222	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14228032	14228222	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:29;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14228223	14243295	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14243296	14243469	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14243296	14243469	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:30;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14243470	14247518	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14247519	14247660	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14247519	14247660	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:31;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14247661	14249471	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14249472	14250222	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14249472	14250222	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:32;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250223	14250617	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14250618	14250741	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14250618	14250741	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:33;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14250742	14251847	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14251848	14252073	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14251848	14252073	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:34;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252074	14252671	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14252672	14252801	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14252672	14252801	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:35;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14252802	14255940	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14255941	14256126	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14255941	14256126	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:36;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256127	14256540	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256541	14256761	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256541	14256761	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:37;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256762	14256846	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14256847	14256935	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14256847	14256935	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:38;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14256936	14265947	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14265948	14266104	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14265948	14266104	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:39;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266105	14266240	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14266241	14266453	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14266241	14266453	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:40;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14266454	14267173	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14267174	14267269	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14267174	14267269	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:41;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14267270	14268886	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:NA19317_ch_T0000415:43;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14268887	14270447	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:NA19317_ch_T0000415:44;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14268887	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:NA19317_ch_T0000415:42;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	14269022	14269024	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000415;gene_id=NA19317_ch_G0000160;Parent=NA19317_ch_T0000415;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:NA19317_ch_T0000415;Name=USP9Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14314470	14330081	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;gene_id=NA19317_ch_G0000161;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=NA19317_ch_G0000161;Name=DDX3Y
NA19317_chrY	CAT	transcript	14314470	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000416;Name=DDX3Y
NA19317_chrY	CAT	exon	14314470	14314583	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14314584	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000416:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000416;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000416:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14314470	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000417;Name=DDX3Y
NA19317_chrY	CAT	exon	14314470	14314583	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14314584	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324252	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324253	14324486	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324487	14324585	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324586	14324669	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324670	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000417:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000417;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000417:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14314470	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000418;Name=DDX3Y
NA19317_chrY	CAT	exon	14314470	14314583	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14314584	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000418;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000418:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14314470	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000419;Name=DDX3Y
NA19317_chrY	CAT	exon	14314470	14314583	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14314584	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326578	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326579	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000419;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14314470	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000420;Name=DDX3Y
NA19317_chrY	CAT	exon	14314470	14314583	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14314584	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324252	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324253	14324486	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324487	14324585	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324586	14324686	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324687	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000420:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000420;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000420:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14315307	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000421;Name=DDX3Y
NA19317_chrY	CAT	exon	14315307	14315417	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14315418	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324252	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324253	14324486	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324487	14324585	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324586	14324669	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324670	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000421:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000421;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000421;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000421:14;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14315307	14330081	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=NA19317_ch_T0000422;Name=DDX3Y
NA19317_chrY	CAT	exon	14315307	14315417	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14315418	14317139	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14317140	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14321441	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14321442	14321571	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14321572	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000422:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000422;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000422;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000422:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14317172	14330081	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_G0000161;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=NA19317_ch_T0000423;Name=DDX3Y
NA19317_chrY	CAT	exon	14317172	14317197	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14317198	14318962	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14318963	14319010	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14319011	14322329	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14322330	14322665	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14322666	14323320	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14323321	14323456	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14323336	14323456	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:0;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	14323336	14323338	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:NA19317_ch_T0000423;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14323457	14324166	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324167	14324252	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14324167	14324252	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:1;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324253	14324486	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324487	14324585	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14324487	14324585	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:2;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324586	14324669	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14324670	14324830	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14324670	14324830	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:3;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14324831	14325232	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325233	14325377	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14325233	14325377	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:4;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325378	14325485	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325486	14325630	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14325486	14325630	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:5;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14325631	14325863	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14325864	14326045	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14325864	14326045	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:6;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326046	14326119	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326120	14326237	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14326120	14326237	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:7;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326238	14326509	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14326510	14326663	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14326510	14326663	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:8;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14326664	14327005	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:11;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327006	14327145	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14327006	14327145	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:9;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14327146	14327645	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:NA19317_ch_T0000423:12;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14327646	14330081	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:NA19317_ch_T0000423:13;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	14327646	14327725	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:NA19317_ch_T0000423:10;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	14327723	14327725	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000423;gene_id=NA19317_ch_G0000161;Parent=NA19317_ch_T0000423;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:NA19317_ch_T0000423;Name=DDX3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14520925	14535240	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=NA19317_ch_G0000162;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=NA19317_ch_G0000162;Name=LOC112268312
NA19317_chrY	CAT	transcript	14520925	14528507	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_G0000162;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000424;Name=LOC112268312
NA19317_chrY	CAT	exon	14520925	14521013	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521014	14521199	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14521200	14521362	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521363	14527308	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14527309	14528507	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=NA19317_ch_T0000424;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000424:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14520925	14535240	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_G0000162;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000425;Name=LOC112268312
NA19317_chrY	CAT	exon	14520925	14521013	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000425:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521014	14521199	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000425:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14521200	14521362	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000425:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521363	14527308	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000425:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14527309	14527445	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000425:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14527446	14534873	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000425:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14534874	14535240	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=NA19317_ch_T0000425;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000425;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000425:3;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14521047	14528507	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_G0000162;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=NA19317_ch_T0000426;Name=LOC112268312
NA19317_chrY	CAT	exon	14521047	14521065	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000426;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000426:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521066	14521199	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000426;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000426:0;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14521200	14521362	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000426;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000426:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14521363	14527308	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000426;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:NA19317_ch_T0000426:1;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14527309	14528507	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=NA19317_ch_T0000426;gene_id=NA19317_ch_G0000162;Parent=NA19317_ch_T0000426;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:NA19317_ch_T0000426:2;Name=LOC112268312;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14643517	14890270	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=NA19317_ch_G0000163;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=NA19317_ch_G0000163;Name=UTY
NA19317_chrY	CAT	transcript	14643517	14889633	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000427;Name=UTY
NA19317_chrY	CAT	exon	14643517	14644448	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14644449	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14889633	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000427;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000427:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000428;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000428;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000429;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000429;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000430;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715277	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715278	14715345	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715346	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778890	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778891	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000430:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000430;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000430:29;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000431;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14743847	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14743848	14743970	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14743971	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000431:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000431;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000431:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000432;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765158	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765159	14765267	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765268	14765333	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765334	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000432:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000432;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000432:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000433;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745430	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745431	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000433;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000434;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000434;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000435;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14885502	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14885503	14885625	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14885626	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000435;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000435:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000436;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745430	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745431	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000436;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000436:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000437;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14687864	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14687865	14687969	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14687970	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770110	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770111	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000437;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000437:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000438;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14767940	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767941	14768076	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768077	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000438;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000439;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14767940	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767941	14768151	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768152	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000439:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000439;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000439:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000440;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715277	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715278	14715345	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715346	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770110	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770111	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000440;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000440:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000441;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765158	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765159	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000441;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000442;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715277	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715278	14715345	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715346	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000442;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000443;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000443;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000443:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000444;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000444;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000444:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000445;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000445;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000446;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709625	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709626	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768183	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768184	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14809556	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14809557	14809670	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14809671	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000446:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000446;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000446:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000447;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709625	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709626	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768151	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768152	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000447;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000447:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000448;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715110	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715111	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14809556	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14809557	14809670	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14809671	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000448;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000448:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000449;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14713806	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14713807	14713835	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14713836	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735972	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735973	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000449:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000449;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000449:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000450;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709601	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709602	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14764722	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14764723	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:29;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000450:29;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000450;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000450:30;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000451;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768151	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768152	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000451;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000452;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000452;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000453;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735972	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735973	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000453;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000453:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000454;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000454;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000454:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000455;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709625	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709626	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000455:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000455;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000455:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000456;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14809556	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14809557	14809670	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14809671	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000456:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000456;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000456:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000457;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000457;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000458;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000458;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000458:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000459;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745430	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745431	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000459;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000460;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764415	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764416	14764463	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14764464	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000460;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000460:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000461;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14732731	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14732732	14732998	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14732999	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000461;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000461:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000462;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709601	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709602	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000462;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000462:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000463;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709625	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709626	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14849301	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14849302	14849381	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14849382	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000463:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000463;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000463:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000464;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14765004	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765005	14765158	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765159	14765267	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765268	14765333	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765334	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768183	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768184	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000464:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000464;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000464:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000465;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735972	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735973	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000465;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000466;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778890	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778891	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000466;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000467;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764415	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764416	14764463	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14764464	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768183	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768184	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000467:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000467;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000467:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000468;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660619	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660620	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768151	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768152	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000468:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000468;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000468:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000469;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778890	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778891	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000469;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000469:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000470;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000470;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000471;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735972	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735973	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000471;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000472;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715277	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715278	14715345	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715346	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000472;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000472:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000473;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14687864	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14687865	14687969	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14687970	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000473;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000473:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000474;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745430	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745431	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000474;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000474:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000475;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768151	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768152	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000475:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000475;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000475:28;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000476;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14813401	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14813402	14813507	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14813508	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000476:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000476;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000476:27;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000477;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000477;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000477:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14657997	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000478;Name=UTY
NA19317_chrY	CAT	exon	14657997	14659500	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14659501	14660634	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14660635	14660805	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14660806	14669895	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14669896	14670022	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14670023	14707331	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14707332	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769573	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769574	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000478;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000478:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14707134	14889633	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000479;Name=UTY
NA19317_chrY	CAT	exon	14707134	14707473	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14707474	14708580	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14708581	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709601	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709602	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14889633	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000479;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14708714	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000480;Name=UTY
NA19317_chrY	CAT	exon	14708714	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709601	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709602	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764415	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764416	14764463	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14764464	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000480:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000480;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000480;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000480:26;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14708750	14890270	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_G0000163;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=NA19317_ch_T0000481;Name=UTY
NA19317_chrY	CAT	exon	14708750	14708768	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14708769	14709601	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:0;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14709602	14709693	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14709694	14712501	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:1;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14712502	14712616	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14712617	14715023	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:2;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715024	14715172	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715173	14715662	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:3;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14715663	14715875	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14715876	14733184	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:4;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14733185	14733390	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14733391	14734230	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:5;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14734231	14734336	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14734337	14735850	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:6;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14735851	14735980	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14735981	14745192	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:7;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14745193	14745965	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14745966	14764632	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:8;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14764633	14765028	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765029	14765552	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:9;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14765553	14765648	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14765649	14767506	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:10;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14767507	14767599	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14767600	14768093	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:11;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768094	14768249	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768250	14768717	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:12;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14768718	14768852	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14768853	14769396	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:13;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14769397	14769616	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14769617	14770059	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:14;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14770060	14770158	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14770159	14775896	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:15;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14775897	14776023	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14776024	14778885	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:16;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14778886	14778979	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14778980	14803475	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:17;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14803476	14803510	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14803511	14806536	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:18;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14806537	14806591	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14806592	14820607	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:19;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14820608	14820728	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14820729	14824349	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:20;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14824350	14824408	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14824409	14858615	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:21;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14858616	14858665	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14858666	14879720	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:22;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14879721	14879829	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14879830	14888853	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:23;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14888854	14888917	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	14888918	14889113	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:NA19317_ch_T0000481:24;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	14889114	14890270	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=NA19317_ch_T0000481;gene_id=NA19317_ch_G0000163;Parent=NA19317_ch_T0000481;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:NA19317_ch_T0000481:25;Name=UTY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	14888777	14888814	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=NA19317_ch_G0000164;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=NA19317_ch_G0000164;Name=MIR12120
NA19317_chrY	CAT	transcript	14888777	14888866	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=NA19317_ch_T0000482;gene_id=NA19317_ch_G0000164;Parent=NA19317_ch_G0000164;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=NA19317_ch_T0000482;Name=MIR12120
NA19317_chrY	CAT	exon	14888777	14888866	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=NA19317_ch_T0000482;gene_id=NA19317_ch_G0000164;Parent=NA19317_ch_T0000482;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:NA19317_ch_T0000482:0;Name=MIR12120;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	14888789	14888814	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=NA19317_ch_T0000483;gene_id=NA19317_ch_G0000164;Parent=NA19317_ch_G0000164;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=NA19317_ch_T0000483;Name=MIR12120
NA19317_chrY	CAT	exon	14888789	14888814	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=NA19317_ch_T0000483;gene_id=NA19317_ch_G0000164;Parent=NA19317_ch_T0000483;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:NA19317_ch_T0000483:0;Name=MIR12120;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	15113409	15115534	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=NA19317_ch_G0000165;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=NA19317_ch_G0000165;Name=TMSB4Y
NA19317_chrY	CAT	transcript	15113409	15115534	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_G0000165;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=NA19317_ch_T0000484;Name=TMSB4Y
NA19317_chrY	CAT	exon	15113409	15113945	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:NA19317_ch_T0000484:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15113846	15113945	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:NA19317_ch_T0000484:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	15113846	15113848	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:NA19317_ch_T0000484;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15113946	15114734	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:NA19317_ch_T0000484:0;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15114735	15115534	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:NA19317_ch_T0000484:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15114735	15114769	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:NA19317_ch_T0000484:1;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	15114767	15114769	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=NA19317_ch_T0000484;gene_id=NA19317_ch_G0000165;Parent=NA19317_ch_T0000484;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:NA19317_ch_T0000484;Name=TMSB4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	15395356	15396057	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;gene_id=NA19317_ch_G0000166;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000166;Name=VCY
NA19317_chrY	CAT	transcript	15395356	15396057	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_G0000166;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=NA19317_ch_T0000485;Name=VCY
NA19317_chrY	CAT	exon	15395356	15395730	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:NA19317_ch_T0000485:0;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15395455	15395730	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:NA19317_ch_T0000485:0;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	15395455	15395457	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:NA19317_ch_T0000485;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15395731	15395922	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:NA19317_ch_T0000485:0;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15395923	15396057	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:NA19317_ch_T0000485:1;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15395923	15396024	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:NA19317_ch_T0000485:1;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	15396022	15396024	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1,hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000485;gene_id=NA19317_ch_G0000166;Parent=NA19317_ch_T0000485;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:NA19317_ch_T0000485;Name=VCY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	15465838	15466569	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;gene_id=NA19317_ch_G0000167;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000167;Name=VCY1B
NA19317_chrY	CAT	transcript	15465838	15466569	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_G0000167;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=NA19317_ch_T0000486;Name=VCY1B
NA19317_chrY	CAT	exon	15465838	15466002	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:NA19317_ch_T0000486:0;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15465901	15466002	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:NA19317_ch_T0000486:0;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	15465901	15465903	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:NA19317_ch_T0000486;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15466003	15466194	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:NA19317_ch_T0000486:0;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15466195	15466569	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:NA19317_ch_T0000486:1;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	15466195	15466470	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:NA19317_ch_T0000486:1;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	15466468	15466470	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1,hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000486;gene_id=NA19317_ch_G0000167;Parent=NA19317_ch_T0000486;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:NA19317_ch_T0000486;Name=VCY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	15932206	16255230	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=NA19317_ch_G0000168;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000168;Name=NLGN4Y
NA19317_chrY	CAT	transcript	15932206	16143172	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000487;Name=NLGN4Y
NA19317_chrY	CAT	exon	15932206	15932531	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15932532	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16143074	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16143075	16143172	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16143075	16143160	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16143158	16143160	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000487;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15932206	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000488;Name=NLGN4Y
NA19317_chrY	CAT	exon	15932206	15932531	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15932532	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132770	16132890	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16132770	16132772	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000488:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000488;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15932206	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000489;Name=NLGN4Y
NA19317_chrY	CAT	exon	15932206	15932531	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15932532	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000489:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000489;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15932206	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000490;Name=NLGN4Y
NA19317_chrY	CAT	exon	15932206	15932531	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15932532	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000490:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000490;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15932206	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000491;Name=NLGN4Y
NA19317_chrY	CAT	exon	15932206	15933162	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15933163	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000491:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000491;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15933336	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000492;Name=NLGN4Y
NA19317_chrY	CAT	exon	15933336	15933488	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15933489	16031625	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031626	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000492;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15933562	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000493;Name=NLGN4Y
NA19317_chrY	CAT	exon	15933562	15933874	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15933875	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000493:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000493:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000493:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000493;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15933562	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000494;Name=NLGN4Y
NA19317_chrY	CAT	exon	15933562	15933874	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15933875	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000494;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16143172	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000495;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16143074	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16143075	16143172	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16143075	16143160	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16143158	16143160	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000495;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000496;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000496:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000496;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000497;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934298	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934299	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000497:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000497;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000498;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	15993777	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15993778	15993879	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15993880	15997213	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15997214	15997318	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15997319	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000498:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000498:7;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000498;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000499;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934298	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934299	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000499;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000500;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934147	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934148	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000500;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000501;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000501;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000502;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	15970183	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15970184	15970263	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15970264	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000502:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000502:7;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000502;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000503;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934147	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934148	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000503:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000503:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000503;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000504;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934526	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934527	15970183	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	15970184	15970263	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15970264	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000504:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000504;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15934119	16143172	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000505;Name=NLGN4Y
NA19317_chrY	CAT	exon	15934119	15934298	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15934299	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16143074	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16143075	16143172	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16143075	16143160	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16143158	16143160	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000505;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15963326	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000506;Name=NLGN4Y
NA19317_chrY	CAT	exon	15963326	15970263	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15970264	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000506:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000506;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15992193	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000507;Name=NLGN4Y
NA19317_chrY	CAT	exon	15992193	15993895	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15993896	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000507:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000507;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15992193	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000508;Name=NLGN4Y
NA19317_chrY	CAT	exon	15992193	15993895	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15993896	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000508;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	15997214	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000509;Name=NLGN4Y
NA19317_chrY	CAT	exon	15997214	15997318	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	15997319	16031613	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000509:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000509:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000509;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	16031614	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000510;Name=NLGN4Y
NA19317_chrY	CAT	exon	16031614	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16110653	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16110654	16110747	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16110711	16110747	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16110711	16110713	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16110748	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000510:6;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000510;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	16031626	16143172	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000511;Name=NLGN4Y
NA19317_chrY	CAT	exon	16031626	16032196	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16031725	16032196	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16031725	16031727	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16032197	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000511:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16129073	16129132	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000511:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132738	16132890	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16143074	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000511:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16143075	16143172	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16143075	16143160	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000511:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16143158	16143160	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000511;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000511;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000511;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	16114402	16255230	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_G0000168;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=NA19317_ch_T0000512;Name=NLGN4Y
NA19317_chrY	CAT	exon	16114402	16114422	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16114423	16129072	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16129073	16129132	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16129133	16132737	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16132738	16132890	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16132770	16132890	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000512:0;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	16132770	16132772	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:NA19317_ch_T0000512;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16132891	16233762	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16233763	16233948	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16233763	16233948	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000512:1;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16233949	16239305	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16239306	16240095	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16239306	16240095	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000512:2;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16240096	16249988	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:NA19317_ch_T0000512:4;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16249989	16255230	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:NA19317_ch_T0000512:5;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	16249989	16250838	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:NA19317_ch_T0000512:3;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	16250836	16250838	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000512;gene_id=NA19317_ch_G0000168;Parent=NA19317_ch_T0000512;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:NA19317_ch_T0000512;Name=NLGN4Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	16203261	16213608	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=NA19317_ch_G0000169;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=NA19317_ch_G0000169;Name=NLGN4Y-AS1
NA19317_chrY	CAT	transcript	16203261	16213608	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_G0000169;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=NA19317_ch_T0000513;Name=NLGN4Y-AS1
NA19317_chrY	CAT	exon	16203261	16203606	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19317_ch_T0000513:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16203607	16208240	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19317_ch_T0000513:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16208241	16208328	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19317_ch_T0000513:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16208329	16210894	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19317_ch_T0000513:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16210895	16210963	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19317_ch_T0000513:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16210964	16213579	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:NA19317_ch_T0000513:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16213580	16213608	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=NA19317_ch_T0000513;gene_id=NA19317_ch_G0000169;Parent=NA19317_ch_T0000513;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:NA19317_ch_T0000513:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	16656635	16774621	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=NA19317_ch_G0000170;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=NA19317_ch_G0000170;Name=LOC107987355
NA19317_chrY	CAT	transcript	16656635	16774621	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_G0000170;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=NA19317_ch_T0000514;Name=LOC107987355
NA19317_chrY	CAT	exon	16656635	16656707	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_T0000514;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19317_ch_T0000514:0;Name=LOC107987355;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16656708	16758147	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_T0000514;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:NA19317_ch_T0000514:0;Name=LOC107987355;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16758148	16758370	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_T0000514;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19317_ch_T0000514:1;Name=LOC107987355;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	16758371	16774535	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_T0000514;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:NA19317_ch_T0000514:1;Name=LOC107987355;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	16774536	16774621	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=NA19317_ch_T0000514;gene_id=NA19317_ch_G0000170;Parent=NA19317_ch_T0000514;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:NA19317_ch_T0000514:2;Name=LOC107987355;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	17547840	17547971	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=NA19317_ch_G0000171;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=NA19317_ch_G0000171;Name=LOC124900508
NA19317_chrY	CAT	transcript	17547840	17547971	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=NA19317_ch_T0000515;gene_id=NA19317_ch_G0000171;Parent=NA19317_ch_G0000171;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=NA19317_ch_T0000515;Name=LOC124900508
NA19317_chrY	CAT	exon	17547840	17547971	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=NA19317_ch_T0000515;gene_id=NA19317_ch_G0000171;Parent=NA19317_ch_T0000515;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:NA19317_ch_T0000515:0;Name=LOC124900508;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	18910616	18926396	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;gene_id=NA19317_ch_G0000172;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=NA19317_ch_G0000172;Name=FAM41AY2
NA19317_chrY	CAT	transcript	18910616	18926396	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_G0000172;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=NA19317_ch_T0000516;Name=FAM41AY2
NA19317_chrY	CAT	exon	18910616	18910773	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18910774	18911368	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:0;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18911369	18911418	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18911419	18922751	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:1;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18922752	18922880	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18922881	18923127	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:2;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18923128	18923221	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18923222	18923814	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:3;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18923815	18923985	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18923986	18924094	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:4;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18924095	18924188	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18924189	18924462	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:5;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18924463	18924672	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:6;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18924673	18924965	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:6;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18924966	18925153	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:7;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18925154	18925365	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:7;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18925366	18925587	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:8;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18925588	18925669	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:NA19317_ch_T0000516:8;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18925670	18926396	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=NA19317_ch_T0000516;gene_id=NA19317_ch_G0000172;Parent=NA19317_ch_T0000516;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:NA19317_ch_T0000516:9;Name=FAM41AY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	18963800	18968491	.	-	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;gene_id=NA19317_ch_G0000173;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=NA19317_ch_G0000173;Name=LOC105377220
NA19317_chrY	CAT	transcript	18963800	18968491	1000	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_G0000173;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=NA19317_ch_T0000517;Name=LOC105377220
NA19317_chrY	CAT	exon	18963800	18965666	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_T0000517;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19317_ch_T0000517:0;Name=LOC105377220;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18965667	18966376	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_T0000517;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:NA19317_ch_T0000517:0;Name=LOC105377220;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18966377	18966505	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_T0000517;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19317_ch_T0000517:1;Name=LOC105377220;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18966506	18967716	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_T0000517;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:NA19317_ch_T0000517:1;Name=LOC105377220;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18967717	18968491	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=NA19317_ch_T0000517;gene_id=NA19317_ch_G0000173;Parent=NA19317_ch_T0000517;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:NA19317_ch_T0000517:2;Name=LOC105377220;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	18984813	18989119	.	-	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;gene_id=NA19317_ch_G0000174;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=NA19317_ch_G0000174;Name=FAM224B
NA19317_chrY	CAT	transcript	18984813	18989119	1000	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_G0000174;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=NA19317_ch_T0000518;Name=FAM224B
NA19317_chrY	CAT	exon	18984813	18985019	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_T0000518;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19317_ch_T0000518:0;Name=FAM224B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18985020	18986354	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_T0000518;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:NA19317_ch_T0000518:0;Name=FAM224B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18986355	18986472	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_T0000518;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19317_ch_T0000518:1;Name=FAM224B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	18986473	18988982	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_T0000518;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:NA19317_ch_T0000518:1;Name=FAM224B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	18988983	18989119	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=NA19317_ch_T0000518;gene_id=NA19317_ch_G0000174;Parent=NA19317_ch_T0000518;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:NA19317_ch_T0000518:2;Name=FAM224B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19098167	19098967	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=NA19317_ch_G0000175;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=NA19317_ch_G0000175;Name=LOC105377219
NA19317_chrY	CAT	transcript	19098167	19098967	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_G0000175;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=NA19317_ch_T0000519;Name=LOC105377219
NA19317_chrY	CAT	exon	19098167	19098623	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_T0000519;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19317_ch_T0000519:0;Name=LOC105377219;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19098624	19098711	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_T0000519;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:NA19317_ch_T0000519:0;Name=LOC105377219;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19098712	19098797	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_T0000519;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19317_ch_T0000519:1;Name=LOC105377219;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19098798	19098884	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_T0000519;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:NA19317_ch_T0000519:1;Name=LOC105377219;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19098885	19098967	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=NA19317_ch_T0000519;gene_id=NA19317_ch_G0000175;Parent=NA19317_ch_T0000519;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:NA19317_ch_T0000519:2;Name=LOC105377219;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19102585	19109446	.	-	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_353.1;gene_id=NA19317_ch_G0000176;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff,transMap;ID=NA19317_ch_G0000176;Name=LOC124905303
NA19317_chrY	CAT	transcript	19102585	19109446	1000	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_G0000176;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=NA19317_ch_T0000520;Name=LOC124905303
NA19317_chrY	CAT	exon	19102585	19106529	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_T0000520;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19317_ch_T0000520:0;Name=LOC124905303;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19106530	19106617	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_T0000520;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:NA19317_ch_T0000520:0;Name=LOC124905303;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19106618	19107366	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_T0000520;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19317_ch_T0000520:1;Name=LOC124905303;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19107367	19107453	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_T0000520;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:NA19317_ch_T0000520:1;Name=LOC124905303;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19107454	19109446	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000520;gene_id=NA19317_ch_G0000176;Parent=NA19317_ch_T0000520;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:NA19317_ch_T0000520:2;Name=LOC124905303;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19178637	19180217	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;gene_id=NA19317_ch_G0000177;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=NA19317_ch_G0000177;Name=XKRY2
NA19317_chrY	CAT	transcript	19178637	19180217	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=NA19317_ch_T0000521;gene_id=NA19317_ch_G0000177;Parent=NA19317_ch_G0000177;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=NA19317_ch_T0000521;Name=XKRY2
NA19317_chrY	CAT	exon	19178637	19180217	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=NA19317_ch_T0000521;gene_id=NA19317_ch_G0000177;Parent=NA19317_ch_T0000521;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:NA19317_ch_T0000521:0;Name=XKRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19287916	19289875	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;gene_id=NA19317_ch_G0000178;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000178;Name=CDY2A
NA19317_chrY	CAT	transcript	19287916	19289875	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000522;gene_id=NA19317_ch_G0000178;Parent=NA19317_ch_G0000178;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=NA19317_ch_T0000522;Name=CDY2A
NA19317_chrY	CAT	exon	19287916	19289875	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000522;gene_id=NA19317_ch_G0000178;Parent=NA19317_ch_T0000522;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:NA19317_ch_T0000522:0;Name=CDY2A;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19287922	19289547	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000522;gene_id=NA19317_ch_G0000178;Parent=NA19317_ch_T0000522;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:NA19317_ch_T0000522:0;Name=CDY2A;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19287922	19287924	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000522;gene_id=NA19317_ch_G0000178;Parent=NA19317_ch_T0000522;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:NA19317_ch_T0000522;Name=CDY2A;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19289545	19289547	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000522;gene_id=NA19317_ch_G0000178;Parent=NA19317_ch_T0000522;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:NA19317_ch_T0000522;Name=CDY2A;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19435486	19437446	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;gene_id=NA19317_ch_G0000179;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000179;Name=CDY2B
NA19317_chrY	CAT	transcript	19435486	19437446	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000523;gene_id=NA19317_ch_G0000179;Parent=NA19317_ch_G0000179;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=NA19317_ch_T0000523;Name=CDY2B
NA19317_chrY	CAT	exon	19435486	19437446	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000523;gene_id=NA19317_ch_G0000179;Parent=NA19317_ch_T0000523;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:NA19317_ch_T0000523:0;Name=CDY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19435814	19437439	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000523;gene_id=NA19317_ch_G0000179;Parent=NA19317_ch_T0000523;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:NA19317_ch_T0000523:0;Name=CDY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19435814	19435816	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000523;gene_id=NA19317_ch_G0000179;Parent=NA19317_ch_T0000523;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:NA19317_ch_T0000523;Name=CDY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19437437	19437439	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000523;gene_id=NA19317_ch_G0000179;Parent=NA19317_ch_T0000523;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:NA19317_ch_T0000523;Name=CDY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19545170	19546750	.	+	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;gene_id=NA19317_ch_G0000180;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=NA19317_ch_G0000180;Name=XKRY
NA19317_chrY	CAT	transcript	19545170	19546750	1000	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=NA19317_ch_T0000524;gene_id=NA19317_ch_G0000180;Parent=NA19317_ch_G0000180;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=NA19317_ch_T0000524;Name=XKRY
NA19317_chrY	CAT	exon	19545170	19546750	.	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=NA19317_ch_T0000524;gene_id=NA19317_ch_G0000180;Parent=NA19317_ch_T0000524;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:NA19317_ch_T0000524:0;Name=XKRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19615943	19622803	.	+	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;gene_id=NA19317_ch_G0000181;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=NA19317_ch_G0000181;Name=LOC124905302
NA19317_chrY	CAT	transcript	19615943	19622803	1000	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_G0000181;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=NA19317_ch_T0000525;Name=LOC124905302
NA19317_chrY	CAT	exon	19615943	19617934	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_T0000525;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19317_ch_T0000525:0;Name=LOC124905302;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19617935	19618021	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_T0000525;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:NA19317_ch_T0000525:0;Name=LOC124905302;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19618022	19618770	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_T0000525;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19317_ch_T0000525:1;Name=LOC124905302;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19618771	19618858	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_T0000525;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:NA19317_ch_T0000525:1;Name=LOC124905302;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19618859	19622803	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1,hg002_chrY_paternal_385.1;transcript_id=NA19317_ch_T0000525;gene_id=NA19317_ch_G0000181;Parent=NA19317_ch_T0000525;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:NA19317_ch_T0000525:2;Name=LOC124905302;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19626421	19627221	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=NA19317_ch_G0000182;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=NA19317_ch_G0000182;Name=LOC105377218
NA19317_chrY	CAT	transcript	19626421	19627221	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_G0000182;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=NA19317_ch_T0000526;Name=LOC105377218
NA19317_chrY	CAT	exon	19626421	19626503	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_T0000526;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19317_ch_T0000526:0;Name=LOC105377218;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19626504	19626590	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_T0000526;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:NA19317_ch_T0000526:0;Name=LOC105377218;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19626591	19626676	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_T0000526;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19317_ch_T0000526:1;Name=LOC105377218;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19626677	19626764	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_T0000526;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:NA19317_ch_T0000526:1;Name=LOC105377218;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19626765	19627221	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=NA19317_ch_T0000526;gene_id=NA19317_ch_G0000182;Parent=NA19317_ch_T0000526;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:NA19317_ch_T0000526:2;Name=LOC105377218;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19736243	19740547	.	+	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;gene_id=NA19317_ch_G0000183;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=NA19317_ch_G0000183;Name=FAM224A
NA19317_chrY	CAT	transcript	19736243	19740547	1000	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_G0000183;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=NA19317_ch_T0000527;Name=FAM224A
NA19317_chrY	CAT	exon	19736243	19736400	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_T0000527;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19317_ch_T0000527:0;Name=FAM224A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19736401	19738910	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_T0000527;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:NA19317_ch_T0000527:0;Name=FAM224A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19738911	19739028	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_T0000527;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19317_ch_T0000527:1;Name=FAM224A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19739029	19740363	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_T0000527;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:NA19317_ch_T0000527:1;Name=FAM224A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19740364	19740547	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=NA19317_ch_T0000527;gene_id=NA19317_ch_G0000183;Parent=NA19317_ch_T0000527;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:NA19317_ch_T0000527:2;Name=FAM224A;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19752325	19761583	.	+	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;gene_id=NA19317_ch_G0000184;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=NA19317_ch_G0000184;Name=LOC105377217
NA19317_chrY	CAT	transcript	19752325	19761583	1000	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_G0000184;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=NA19317_ch_T0000528;Name=LOC105377217
NA19317_chrY	CAT	exon	19752325	19757666	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_T0000528;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19317_ch_T0000528:0;Name=LOC105377217;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19757667	19758877	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_T0000528;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:NA19317_ch_T0000528:0;Name=LOC105377217;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19758878	19759006	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_T0000528;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19317_ch_T0000528:1;Name=LOC105377217;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19759007	19759716	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_T0000528;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:NA19317_ch_T0000528:1;Name=LOC105377217;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19759717	19761583	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=NA19317_ch_T0000528;gene_id=NA19317_ch_G0000184;Parent=NA19317_ch_T0000528;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:NA19317_ch_T0000528:2;Name=LOC105377217;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19798988	19814764	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;gene_id=NA19317_ch_G0000185;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=NA19317_ch_G0000185;Name=FAM41AY1
NA19317_chrY	CAT	transcript	19798988	19814764	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_G0000185;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=NA19317_ch_T0000529;Name=FAM41AY1
NA19317_chrY	CAT	exon	19798988	19799714	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19799715	19799796	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:0;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19799797	19800018	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19800019	19800230	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:1;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19800231	19800418	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19800419	19800711	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:2;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19800712	19800921	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19800922	19801195	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:3;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19801196	19801289	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19801290	19801398	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:4;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19801399	19801569	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19801570	19802162	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:5;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19802163	19802256	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:6;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19802257	19802503	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:6;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19802504	19802632	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:7;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19802633	19813961	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:7;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19813962	19814011	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:8;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19814012	19814606	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:NA19317_ch_T0000529:8;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19814607	19814764	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=NA19317_ch_T0000529;gene_id=NA19317_ch_G0000185;Parent=NA19317_ch_T0000529;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:NA19317_ch_T0000529:9;Name=FAM41AY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19893752	19927587	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;gene_id=NA19317_ch_G0000186;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=NA19317_ch_G0000186;Name=LOC124905304
NA19317_chrY	CAT	transcript	19893752	19927587	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_G0000186;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=NA19317_ch_T0000530;Name=LOC124905304
NA19317_chrY	CAT	exon	19893752	19893792	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:0;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19893793	19896193	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:0;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19896194	19896356	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:1;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19896357	19897019	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:1;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19897020	19897121	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:2;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19897122	19899483	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:2;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19899484	19899687	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:3;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19899688	19901403	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:3;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19901404	19901538	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:4;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19901539	19910342	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:4;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19910343	19910575	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:5;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19910576	19910668	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:5;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19910669	19910774	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:6;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19910775	19916385	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:6;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19916386	19916513	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:7;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19916514	19925279	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:NA19317_ch_T0000530:7;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19925280	19927587	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=NA19317_ch_T0000530;gene_id=NA19317_ch_G0000186;Parent=NA19317_ch_T0000530;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:NA19317_ch_T0000530:8;Name=LOC124905304;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19939364	19998701	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=NA19317_ch_G0000187;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000187;Name=HSFY1
NA19317_chrY	CAT	transcript	19939364	19958313	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19317_ch_T0000531;Name=HSFY1
NA19317_chrY	CAT	exon	19939364	19939558	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19939533	19939558	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19939533	19939535	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19317_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19939559	19956753	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19956754	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19956754	19957021	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19957499	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19957500	19958313	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000531:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19957500	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000531:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19958190	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000531;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19317_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	19956402	19958313	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19317_ch_T0000532;Name=HSFY1
NA19317_chrY	CAT	exon	19956402	19956655	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19956645	19956655	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19956645	19956647	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19317_ch_T0000532;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19956656	19956753	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19956754	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19956754	19957021	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19957499	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19957500	19958313	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000532:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19957500	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000532:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19958190	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000532;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000532;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19317_ch_T0000532;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	19956412	19998701	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19317_ch_T0000533;Name=HSFY1
NA19317_chrY	CAT	exon	19956412	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19956509	19957021	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19956509	19956511	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19317_ch_T0000533;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19998273	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19998274	19998701	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19998274	19998372	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19998370	19998372	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000533;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000533;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19317_ch_T0000533;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	19956412	19961797	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=NA19317_ch_T0000534;Name=HSFY1
NA19317_chrY	CAT	exon	19956412	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19959834	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19959835	19959944	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19959945	19960507	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19960508	19960594	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000534:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19960595	19961641	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000534:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19961642	19961797	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000534;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000534;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000534:3;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	19956412	19998701	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=NA19317_ch_T0000535;Name=HSFY1
NA19317_chrY	CAT	exon	19956412	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19959834	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000535:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19959835	19959944	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19959945	19960507	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000535:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19960508	19960594	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19960595	19961641	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000535:2;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19961642	19961796	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:3;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19961797	19992410	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000535:3;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19992411	19992496	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:4;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19992497	19998273	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:NA19317_ch_T0000535:4;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19998274	19998701	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000535;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000535;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:NA19317_ch_T0000535:5;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	19956441	19958313	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_G0000187;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=NA19317_ch_T0000536;Name=HSFY1
NA19317_chrY	CAT	exon	19956441	19957021	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19956509	19957021	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	19956509	19956511	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:NA19317_ch_T0000536;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19957022	19957499	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:NA19317_ch_T0000536:0;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19957500	19958313	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:NA19317_ch_T0000536:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	19957500	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:NA19317_ch_T0000536:1;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	19958190	19958192	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000536;gene_id=NA19317_ch_G0000187;Parent=NA19317_ch_T0000536;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:NA19317_ch_T0000536;Name=HSFY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	19990944	20000259	.	-	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=NA19317_ch_G0000188;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=NA19317_ch_G0000188;Name=TTTY9B
NA19317_chrY	CAT	transcript	19990944	20000259	1000	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_G0000188;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=NA19317_ch_T0000537;Name=TTTY9B
NA19317_chrY	CAT	exon	19990944	19992086	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:NA19317_ch_T0000537:0;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19992087	19997149	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:NA19317_ch_T0000537:0;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19997150	19997286	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:NA19317_ch_T0000537:1;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19997287	19997868	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:NA19317_ch_T0000537:1;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19997869	19997982	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:NA19317_ch_T0000537:2;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19997983	19998343	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:NA19317_ch_T0000537:2;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	19998344	19998444	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:NA19317_ch_T0000537:3;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	19998445	20000117	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:NA19317_ch_T0000537:3;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20000118	20000259	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=NA19317_ch_T0000537;gene_id=NA19317_ch_G0000188;Parent=NA19317_ch_T0000537;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:NA19317_ch_T0000537:4;Name=TTTY9B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20139652	20148967	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=NA19317_ch_G0000189;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=NA19317_ch_G0000189;Name=TTTY9A
NA19317_chrY	CAT	transcript	20139652	20148967	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_G0000189;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=NA19317_ch_T0000538;Name=TTTY9A
NA19317_chrY	CAT	exon	20139652	20139793	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19317_ch_T0000538:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20139794	20141466	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19317_ch_T0000538:0;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20141467	20141567	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19317_ch_T0000538:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20141568	20141928	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19317_ch_T0000538:1;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20141929	20142042	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19317_ch_T0000538:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20142043	20142624	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19317_ch_T0000538:2;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20142625	20142761	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19317_ch_T0000538:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20142762	20147824	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:NA19317_ch_T0000538:3;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20147825	20148967	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=NA19317_ch_T0000538;gene_id=NA19317_ch_G0000189;Parent=NA19317_ch_T0000538;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:NA19317_ch_T0000538:4;Name=TTTY9A;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20141210	20200545	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;gene_id=NA19317_ch_G0000190;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000190;Name=HSFY2
NA19317_chrY	CAT	transcript	20141210	20183516	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=NA19317_ch_T0000539;Name=HSFY2
NA19317_chrY	CAT	exon	20141210	20141637	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20141539	20141637	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20141539	20141541	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:NA19317_ch_T0000539;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20141638	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183516	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20182887	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20183397	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000539;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:NA19317_ch_T0000539;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20141210	20183516	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=NA19317_ch_T0000540;Name=HSFY2
NA19317_chrY	CAT	exon	20141210	20141637	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20141638	20147414	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:NA19317_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20147415	20147500	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20147501	20178117	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:NA19317_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20178118	20178272	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20178273	20179319	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:NA19317_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20179320	20179406	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:3;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20179407	20179963	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:NA19317_ch_T0000540:3;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20179964	20180073	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:4;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20180074	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:NA19317_ch_T0000540:4;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183516	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000540;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000540;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:NA19317_ch_T0000540:5;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20179295	20183516	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=NA19317_ch_T0000541;Name=HSFY2
NA19317_chrY	CAT	exon	20179295	20179406	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20179385	20179406	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20179385	20179387	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:NA19317_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20179407	20179963	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20179964	20180073	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20179964	20180073	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20180074	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183516	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000541:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20182887	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000541:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20183397	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000541;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:NA19317_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20181595	20183507	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=NA19317_ch_T0000542;Name=HSFY2
NA19317_chrY	CAT	exon	20181595	20182408	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20181716	20182408	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20181716	20181718	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:NA19317_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20182409	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183154	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20182887	20183154	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20183155	20183252	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20183253	20183507	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000542:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20183253	20183263	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000542:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20183261	20183263	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000542;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:NA19317_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20181595	20183516	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=NA19317_ch_T0000543;Name=HSFY2
NA19317_chrY	CAT	exon	20181595	20182408	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20181716	20182408	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20181716	20181718	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:NA19317_ch_T0000543;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20182409	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000543:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183516	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000543:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20182887	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000543:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20183397	20183399	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000543;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000543;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:NA19317_ch_T0000543;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20181595	20200545	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_G0000190;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=NA19317_ch_T0000544;Name=HSFY2
NA19317_chrY	CAT	exon	20181595	20182408	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20181716	20182408	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20181716	20181718	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:NA19317_ch_T0000544;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20182409	20182886	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000544:0;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20182887	20183154	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000544:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20182887	20183154	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000544:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20183155	20200350	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:NA19317_ch_T0000544:1;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20200351	20200545	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:NA19317_ch_T0000544:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20200351	20200376	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:NA19317_ch_T0000544:2;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20200374	20200376	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000544;gene_id=NA19317_ch_G0000190;Parent=NA19317_ch_T0000544;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:NA19317_ch_T0000544;Name=HSFY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20212320	20246176	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=NA19317_ch_G0000191;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=NA19317_ch_G0000191;Name=LOC124905305
NA19317_chrY	CAT	transcript	20212320	20246174	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_G0000191;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=NA19317_ch_T0000545;Name=LOC124905305
NA19317_chrY	CAT	exon	20212320	20214627	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20214628	20223392	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20223393	20223520	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20223521	20229131	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20229132	20229563	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20229564	20238356	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20238357	20238491	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20238492	20240207	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20240208	20240411	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20240412	20242773	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20242774	20242875	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20242876	20243533	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20243534	20243696	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20243697	20246097	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000545:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20246098	20246174	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000545;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000545;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000545:7;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20212320	20246176	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_G0000191;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=NA19317_ch_T0000546;Name=LOC124905305
NA19317_chrY	CAT	exon	20212320	20214627	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20214628	20229131	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:0;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20229132	20229563	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20229564	20238356	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:1;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20238357	20238491	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20238492	20240207	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:2;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20240208	20240411	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20240412	20242773	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:3;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20242774	20242875	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20242876	20243533	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:4;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20243534	20243696	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20243697	20246097	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:NA19317_ch_T0000546:5;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20246098	20246176	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=NA19317_ch_T0000546;gene_id=NA19317_ch_G0000191;Parent=NA19317_ch_T0000546;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:NA19317_ch_T0000546:6;Name=LOC124905305;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20243507	20243668	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=NA19317_ch_G0000192;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=NA19317_ch_G0000192;Name=LOC124905307
NA19317_chrY	CAT	transcript	20243507	20243668	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=NA19317_ch_T0000547;gene_id=NA19317_ch_G0000192;Parent=NA19317_ch_G0000192;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=NA19317_ch_T0000547;Name=LOC124905307
NA19317_chrY	CAT	exon	20243507	20243668	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=NA19317_ch_T0000547;gene_id=NA19317_ch_G0000192;Parent=NA19317_ch_T0000547;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:NA19317_ch_T0000547:0;Name=LOC124905307;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20282288	20487358	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=NA19317_ch_G0000193;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=NA19317_ch_G0000193;Name=TTTY14
NA19317_chrY	CAT	transcript	20282288	20485814	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000548;Name=TTTY14
NA19317_chrY	CAT	exon	20282288	20282621	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20282622	20286854	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20286855	20286992	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20286993	20322174	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20322175	20322289	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20322290	20478534	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20478535	20478609	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000548:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20478610	20485751	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000548:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20485752	20485814	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=NA19317_ch_T0000548;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000548:4;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20282288	20485840	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000549;Name=TTTY14
NA19317_chrY	CAT	exon	20282288	20282621	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20282622	20286854	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20286855	20286992	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20286993	20483309	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20483310	20483372	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20483373	20485751	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20485752	20485840	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=NA19317_ch_T0000549;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000549:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20282288	20487358	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000550;Name=TTTY14
NA19317_chrY	CAT	exon	20282288	20282621	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20282622	20342549	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20342550	20342648	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20342649	20343163	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20343164	20343282	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000550:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20343283	20478534	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000550:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20478535	20478609	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000550:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20478610	20486855	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000550:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20486856	20487358	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=NA19317_ch_T0000550;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000550:4;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20282288	20487358	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000551;Name=TTTY14
NA19317_chrY	CAT	exon	20282288	20282621	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20282622	20286854	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20286855	20286992	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20286993	20478534	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20478535	20478609	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20478610	20486855	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20486856	20487358	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=NA19317_ch_T0000551;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000551:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20282288	20487358	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000552;Name=TTTY14
NA19317_chrY	CAT	exon	20282288	20282621	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20282622	20286854	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20286855	20286992	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20286993	20486855	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20486856	20487358	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=NA19317_ch_T0000552;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20341814	20485840	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000553;Name=TTTY14
NA19317_chrY	CAT	exon	20341814	20342648	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20342649	20454347	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20454348	20454501	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20454502	20455047	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20455048	20455097	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000553:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20455098	20478534	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000553:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20478535	20478609	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000553:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20478610	20485751	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000553:3;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20485752	20485840	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=NA19317_ch_T0000553;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000553:4;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20342258	20485814	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000554;Name=TTTY14
NA19317_chrY	CAT	exon	20342258	20342648	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20342649	20478534	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000554:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20478535	20478609	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000554:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20478610	20485751	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000554:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20485752	20485814	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=NA19317_ch_T0000554;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000554;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000554:2;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20342258	20487358	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19317_ch_T0000555;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_G0000193;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=NA19317_ch_T0000555;Name=TTTY14
NA19317_chrY	CAT	exon	20342258	20342648	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19317_ch_T0000555;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000555:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20342649	20486855	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19317_ch_T0000555;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:NA19317_ch_T0000555:0;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20486856	20487358	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=NA19317_ch_T0000555;gene_id=NA19317_ch_G0000193;Parent=NA19317_ch_T0000555;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:NA19317_ch_T0000555:1;Name=TTTY14;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20489667	20498689	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=NA19317_ch_G0000194;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=NA19317_ch_G0000194;Name=LOC124905306
NA19317_chrY	CAT	transcript	20489667	20498689	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19317_ch_T0000556;gene_id=NA19317_ch_G0000194;Parent=NA19317_ch_G0000194;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=NA19317_ch_T0000556;Name=LOC124905306
NA19317_chrY	CAT	exon	20489667	20490536	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19317_ch_T0000556;gene_id=NA19317_ch_G0000194;Parent=NA19317_ch_T0000556;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:NA19317_ch_T0000556:0;Name=LOC124905306;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20490537	20496310	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19317_ch_T0000556;gene_id=NA19317_ch_G0000194;Parent=NA19317_ch_T0000556;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:NA19317_ch_T0000556:0;Name=LOC124905306;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20496311	20498689	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=NA19317_ch_T0000556;gene_id=NA19317_ch_G0000194;Parent=NA19317_ch_T0000556;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:NA19317_ch_T0000556:1;Name=LOC124905306;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20865577	20913303	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=NA19317_ch_G0000195;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=NA19317_ch_G0000195;Name=BCORP1
NA19317_chrY	CAT	transcript	20865577	20913303	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_G0000195;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=NA19317_ch_T0000557;Name=BCORP1
NA19317_chrY	CAT	exon	20865577	20867010	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:0;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20867011	20869069	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:0;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20869070	20869225	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:1;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20869226	20869434	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:1;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20869435	20869512	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:2;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20869513	20875250	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:2;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20875251	20875372	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:3;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20875373	20876600	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:3;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20876601	20877519	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:4;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20877520	20884049	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:4;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20884050	20884289	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:5;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20884290	20884784	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:5;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20884785	20885048	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:6;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20885049	20890313	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:6;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20890314	20890439	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:7;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20890440	20913181	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000557:7;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20913182	20913303	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=NA19317_ch_T0000557;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000557;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000557:8;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20865577	20913303	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_G0000195;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=NA19317_ch_T0000558;Name=BCORP1
NA19317_chrY	CAT	exon	20865577	20867010	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:0;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20867011	20867202	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:0;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20867203	20867263	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:1;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20867264	20869069	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:1;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20869070	20869225	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:2;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20869226	20869434	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:2;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20869435	20869512	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:3;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20869513	20870104	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:3;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20870105	20870250	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:4;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20870251	20875250	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:4;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20875251	20875372	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:5;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20875373	20876600	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:5;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20876601	20877519	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:6;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20877520	20884049	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:6;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20884050	20884289	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:7;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20884290	20884784	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:7;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20884785	20885048	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:8;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20885049	20890313	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:8;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20890314	20890439	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:9;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20890440	20913181	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:NA19317_ch_T0000558:9;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20913182	20913303	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=NA19317_ch_T0000558;gene_id=NA19317_ch_G0000195;Parent=NA19317_ch_T0000558;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:NA19317_ch_T0000558:10;Name=BCORP1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20891761	20893600	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=NA19317_ch_G0000196;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000196;Name=LOC102723934
NA19317_chrY	CAT	transcript	20891761	20893600	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_G0000196;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=NA19317_ch_T0000559;Name=LOC102723934
NA19317_chrY	CAT	exon	20891761	20892149	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19317_ch_T0000559:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20891761	20892149	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19317_ch_T0000559:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	20891761	20891763	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:NA19317_ch_T0000559;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20892150	20892461	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:NA19317_ch_T0000559:0;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20892462	20892473	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19317_ch_T0000559:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20892462	20892473	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19317_ch_T0000559:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20892474	20892553	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:NA19317_ch_T0000559:1;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20892554	20893600	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:NA19317_ch_T0000559:2;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	20892554	20893577	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:NA19317_ch_T0000559:2;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	20893575	20893577	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000559;gene_id=NA19317_ch_G0000196;Parent=NA19317_ch_T0000559;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:NA19317_ch_T0000559;Name=LOC102723934;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20964029	20977137	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=NA19317_ch_G0000197;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=NA19317_ch_G0000197;Name=LOC105377223
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000560;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20966940	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20966941	20967357	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20967358	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968151	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968152	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20977109	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20977110	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=NA19317_ch_T0000560;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000560:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000561;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20966940	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20966941	20967357	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20967358	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968167	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968168	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20977109	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20977110	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=NA19317_ch_T0000561;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000561:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000562;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20966940	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20966941	20967357	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20967358	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968151	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968152	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20969467	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20969468	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=NA19317_ch_T0000562;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000562:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000563;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20965684	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20965685	20967357	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20967358	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968167	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968168	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20969467	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20969468	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=NA19317_ch_T0000563;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000563:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000564;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20965684	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20965685	20967357	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20967358	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968151	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968152	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20977109	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20977110	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=NA19317_ch_T0000564;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000564:3;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000565;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968151	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000565:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968152	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20969467	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000565:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20969468	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=NA19317_ch_T0000565;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000565;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000565:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20964029	20977137	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_G0000197;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=NA19317_ch_T0000566;Name=LOC105377223
NA19317_chrY	CAT	exon	20964029	20967417	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000566:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20967418	20968151	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000566:0;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20968152	20968268	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000566:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20968269	20977109	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:NA19317_ch_T0000566:1;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20977110	20977137	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=NA19317_ch_T0000566;gene_id=NA19317_ch_G0000197;Parent=NA19317_ch_T0000566;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:NA19317_ch_T0000566:2;Name=LOC105377223;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	20977486	21017308	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=NA19317_ch_G0000198;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=NA19317_ch_G0000198;Name=TXLNGY
NA19317_chrY	CAT	transcript	20977486	21000551	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_G0000198;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=NA19317_ch_T0000567;Name=TXLNGY
NA19317_chrY	CAT	exon	20977486	20977610	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000567:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20977611	20997337	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000567:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20997338	20997635	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000567:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20997636	20999648	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000567:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20999649	20999740	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000567:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20999741	21000210	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000567:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21000211	21000551	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=NA19317_ch_T0000567;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000567;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000567:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	20977486	21017308	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_G0000198;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=NA19317_ch_T0000568;Name=TXLNGY
NA19317_chrY	CAT	exon	20977486	20977610	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20977611	20997337	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:0;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20997338	20997635	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20997636	20999648	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:1;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	20999649	20999740	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	20999741	21001907	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:2;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21001908	21002087	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21002088	21003526	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:3;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21003527	21003721	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:4;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21003722	21006142	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:4;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21006143	21006262	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:5;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21006263	21007722	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:5;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21007723	21007797	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:6;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21007798	21009870	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:6;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21009871	21009963	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:7;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21009964	21012347	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:7;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21012348	21012443	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:8;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21012444	21013928	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:NA19317_ch_T0000568:8;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21013929	21017308	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=NA19317_ch_T0000568;gene_id=NA19317_ch_G0000198;Parent=NA19317_ch_T0000568;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:NA19317_ch_T0000568:9;Name=TXLNGY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	21114007	21154868	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=NA19317_ch_G0000199;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000199;Name=KDM5D
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000569;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21133482	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21133483	21133575	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21133483	21133575	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21133576	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000569:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000569:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000569;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000569:27;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000570;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118463	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118464	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118464	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119720	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119720	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119721	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000570:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000570:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000570;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000570:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000571;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119720	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119720	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119721	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000571;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000571:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000572;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118463	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118464	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118464	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119720	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119720	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119721	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000572;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000573;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000573;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000574;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000574;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000574:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000575;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000575;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000576;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119720	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119720	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119721	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000576;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000576:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000577;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118463	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118464	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118464	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000577;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000577:26;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21114007	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000578;Name=KDM5D
NA19317_chrY	CAT	exon	21114007	21116487	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116137	21116487	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116137	21116139	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116488	21116582	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116583	21116782	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116583	21116782	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116783	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118463	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118464	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118464	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000578:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000578;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000578:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21116620	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000579;Name=KDM5D
NA19317_chrY	CAT	exon	21116620	21116750	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116722	21116750	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21116722	21116724	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21116751	21116935	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21116936	21117005	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21116936	21117005	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117006	21117288	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21117289	21117888	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21117289	21117888	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21117889	21118075	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118076	21118213	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118076	21118213	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118214	21118385	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21118386	21118565	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21118386	21118565	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21118566	21119016	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119017	21119155	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119017	21119155	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119156	21119592	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21119593	21119951	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21119593	21119951	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21119952	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:20;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:21;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:22;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:23;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000579:24;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000579;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000579:25;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21119602	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000580;Name=KDM5D
NA19317_chrY	CAT	exon	21119602	21120402	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120319	21120402	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21120319	21120321	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120403	21120517	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21120518	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21120518	21120614	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125493	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125494	21125641	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125494	21125641	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125642	21125756	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125757	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125757	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000580:18;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000580;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000580:19;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21120542	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000581;Name=KDM5D
NA19317_chrY	CAT	exon	21120542	21120614	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21120615	21125725	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125726	21125881	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125749	21125881	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21125749	21125751	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21125882	21125964	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21125965	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21125965	21126146	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000581:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000581;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000581:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000581;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000581;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000581:17;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21126013	21154868	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_G0000199;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=NA19317_ch_T0000582;Name=KDM5D
NA19317_chrY	CAT	exon	21126013	21126146	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126130	21126146	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21126130	21126132	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:NA19317_ch_T0000582;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126147	21126240	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:0;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126241	21126253	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126241	21126253	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126254	21126420	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:1;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126421	21126615	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126421	21126615	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126616	21126737	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:2;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21126738	21126857	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21126738	21126857	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21126858	21131013	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:3;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131014	21131176	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131014	21131176	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131177	21131271	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:4;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21131272	21131453	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21131272	21131453	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21131454	21141913	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:5;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21141914	21142072	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21141914	21142072	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142073	21142187	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:6;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142188	21142307	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142188	21142307	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142308	21142725	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:7;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21142726	21142884	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21142726	21142884	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21142885	21145493	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:8;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145494	21145639	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145494	21145639	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145640	21145762	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:9;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21145763	21145892	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21145763	21145892	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21145893	21149669	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:10;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21149670	21149804	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21149670	21149804	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21149805	21151459	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:11;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151460	21151630	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151460	21151630	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21151631	21151876	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:12;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21151877	21151999	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21151877	21151999	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21152000	21153303	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:13;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21153304	21153381	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21153304	21153381	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21153382	21154526	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:14;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154527	21154695	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21154527	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:NA19317_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21154674	21154676	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:NA19317_ch_T0000582;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21154696	21154812	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:NA19317_ch_T0000582:15;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21154813	21154868	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000582;gene_id=NA19317_ch_G0000199;Parent=NA19317_ch_T0000582;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:NA19317_ch_T0000582:16;Name=KDM5D;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	21154898	21167590	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=NA19317_ch_G0000200;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=NA19317_ch_G0000200;Name=LOC105377224
NA19317_chrY	CAT	transcript	21154898	21167697	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_G0000200;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19317_ch_T0000583;Name=LOC105377224
NA19317_chrY	CAT	exon	21154898	21155855	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21155856	21164766	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21164767	21164956	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21164957	21165345	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21165346	21167697	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=NA19317_ch_T0000583;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000583:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21154927	21169212	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_G0000200;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19317_ch_T0000584;Name=LOC105377224
NA19317_chrY	CAT	exon	21154927	21155855	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000584:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21155856	21164867	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000584:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21164868	21164956	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000584:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21164957	21165345	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000584:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21165346	21169212	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=NA19317_ch_T0000584;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000584;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000584:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21154980	21167590	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_G0000200;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=NA19317_ch_T0000585;Name=LOC105377224
NA19317_chrY	CAT	exon	21154980	21155855	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000585:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21155856	21164867	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000585:0;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21164868	21164956	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000585:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21164957	21165345	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000585:1;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21165346	21165465	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000585:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21165466	21166783	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:NA19317_ch_T0000585:2;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21166784	21167590	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=NA19317_ch_T0000585;gene_id=NA19317_ch_G0000200;Parent=NA19317_ch_T0000585;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:NA19317_ch_T0000585:3;Name=LOC105377224;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	21826440	21879993	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=NA19317_ch_G0000201;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=NA19317_ch_G0000201;Name=TTTY10
NA19317_chrY	CAT	transcript	21826440	21879993	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_G0000201;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=NA19317_ch_T0000586;Name=TTTY10
NA19317_chrY	CAT	exon	21826440	21826594	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:0;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21826595	21827199	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19317_ch_T0000586:0;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21827200	21827439	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:1;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21827440	21828960	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19317_ch_T0000586:1;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21828961	21829020	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:2;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21829021	21830643	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19317_ch_T0000586:2;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21830644	21830753	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:3;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21830754	21868116	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19317_ch_T0000586:3;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21868117	21868221	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:4;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21868222	21879035	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:NA19317_ch_T0000586:4;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21879036	21879993	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=NA19317_ch_T0000586;gene_id=NA19317_ch_G0000201;Parent=NA19317_ch_T0000586;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:NA19317_ch_T0000586:5;Name=TTTY10;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	21936538	21953917	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=NA19317_ch_G0000202;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000202;Name=EIF1AY
NA19317_chrY	CAT	transcript	21936538	21953917	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_G0000202;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=NA19317_ch_T0000587;Name=EIF1AY
NA19317_chrY	CAT	exon	21936538	21936649	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21936634	21936649	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21936634	21936636	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:NA19317_ch_T0000587;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21936650	21940369	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000587:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21940370	21940453	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21940370	21940453	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21940454	21943351	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000587:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21943352	21943455	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21943352	21943455	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21943456	21948786	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000587:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21948787	21948868	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21948787	21948868	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21948869	21950246	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000587:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21950247	21950338	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21950247	21950338	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21950339	21953103	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000587:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21953104	21953917	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000587:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21953104	21953109	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000587:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21953107	21953109	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000587;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000587;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:NA19317_ch_T0000587;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	21936538	21953917	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_G0000202;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=NA19317_ch_T0000588;Name=EIF1AY
NA19317_chrY	CAT	exon	21936538	21936649	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21936634	21936649	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	21936634	21936636	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:NA19317_ch_T0000588;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21936650	21940369	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:0;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21940370	21940453	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21940370	21940453	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21940454	21943351	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:1;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21943352	21943455	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21943352	21943455	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21943456	21945236	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:2;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21945237	21945287	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21945237	21945287	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21945288	21948786	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:3;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21948787	21948868	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21948787	21948868	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21948869	21950246	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:4;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21950247	21950338	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21950247	21950338	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	21950339	21953103	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:NA19317_ch_T0000588:5;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	21953104	21953917	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:NA19317_ch_T0000588:6;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	21953104	21953109	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:NA19317_ch_T0000588:6;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	21953107	21953109	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000588;gene_id=NA19317_ch_G0000202;Parent=NA19317_ch_T0000588;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:NA19317_ch_T0000588;Name=EIF1AY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22116872	22141795	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=NA19317_ch_G0000203;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000203;Name=RPS4Y2
NA19317_chrY	CAT	transcript	22116872	22141795	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_G0000203;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=NA19317_ch_T0000589;Name=RPS4Y2
NA19317_chrY	CAT	exon	22116872	22116930	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22116928	22116930	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22116928	22116930	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:NA19317_ch_T0000589;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22116931	22117541	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:0;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22117542	22117619	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22117542	22117619	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22117620	22120630	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:1;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22120631	22120811	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22120631	22120811	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22120812	22122046	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:2;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22122047	22122144	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22122047	22122144	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22122145	22129567	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:3;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22129568	22129739	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22129568	22129739	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22129740	22140271	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:4;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22140272	22140429	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22140272	22140429	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22140430	22141693	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:NA19317_ch_T0000589:5;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22141694	22141795	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:NA19317_ch_T0000589:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22141694	22141795	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:NA19317_ch_T0000589:6;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22141793	22141795	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000589;gene_id=NA19317_ch_G0000203;Parent=NA19317_ch_T0000589;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:NA19317_ch_T0000589;Name=RPS4Y2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22499447	22533794	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=NA19317_ch_G0000204;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=NA19317_ch_G0000204;Name=LOC105377225
NA19317_chrY	CAT	transcript	22499447	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000590;Name=LOC105377225
NA19317_chrY	CAT	exon	22499447	22499682	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22499683	22508992	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22508993	22509043	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509044	22509235	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509236	22509330	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509331	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000590:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=NA19317_ch_T0000590;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000590:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22499447	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000591;Name=LOC105377225
NA19317_chrY	CAT	exon	22499447	22499682	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22499683	22509235	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509236	22509330	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509331	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=NA19317_ch_T0000591;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000591:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22499447	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000592;Name=LOC105377225
NA19317_chrY	CAT	exon	22499447	22499682	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22499683	22509358	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509359	22509412	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509413	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=NA19317_ch_T0000592;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000592:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22499447	22533794	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000593;Name=LOC105377225
NA19317_chrY	CAT	exon	22499447	22499682	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22499683	22505596	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22505597	22505688	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22505689	22508992	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22508993	22509043	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509044	22509235	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509236	22509330	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509331	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000593:5;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22533794	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=NA19317_ch_T0000593;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000593:6;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22504856	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000594;Name=LOC105377225
NA19317_chrY	CAT	exon	22504856	22509043	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509044	22509235	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509236	22509412	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509413	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=NA19317_ch_T0000594;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000594:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22504856	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000595;Name=LOC105377225
NA19317_chrY	CAT	exon	22504856	22509043	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509044	22509358	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000595:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509359	22509412	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509413	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000595:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513651	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000595:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513652	22513786	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513787	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000595:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=NA19317_ch_T0000595;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000595;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000595:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22504856	22531039	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_G0000204;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=NA19317_ch_T0000596;Name=LOC105377225
NA19317_chrY	CAT	exon	22504856	22509043	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000596:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509044	22509235	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000596:0;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22509236	22509412	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000596:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22509413	22512401	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000596:1;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22512402	22512455	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000596:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22512456	22513492	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000596:2;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22513493	22513584	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000596:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22513585	22530775	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:NA19317_ch_T0000596:3;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22530776	22531039	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=NA19317_ch_T0000596;gene_id=NA19317_ch_G0000204;Parent=NA19317_ch_T0000596;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:NA19317_ch_T0000596:4;Name=LOC105377225;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22588957	22614193	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=NA19317_ch_G0000205;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=NA19317_ch_G0000205;Name=LOC107987346
NA19317_chrY	CAT	transcript	22588957	22614193	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_G0000205;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=NA19317_ch_T0000597;Name=LOC107987346
NA19317_chrY	CAT	exon	22588957	22588994	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000597:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22588995	22589171	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19317_ch_T0000597:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22589172	22589279	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000597:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22589280	22611368	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19317_ch_T0000597:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22611369	22614193	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=NA19317_ch_T0000597;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000597;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000597:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22588957	22614193	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_G0000205;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=NA19317_ch_T0000598;Name=LOC107987346
NA19317_chrY	CAT	exon	22588957	22588994	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000598:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22588995	22589171	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19317_ch_T0000598:0;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22589172	22589279	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000598:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22589280	22611368	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19317_ch_T0000598:1;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22611369	22611527	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000598:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22611528	22613941	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:NA19317_ch_T0000598:2;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22613942	22614193	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=NA19317_ch_T0000598;gene_id=NA19317_ch_G0000205;Parent=NA19317_ch_T0000598;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:NA19317_ch_T0000598:3;Name=LOC107987346;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22608884	22663827	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=NA19317_ch_G0000206;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=NA19317_ch_G0000206;Name=LOC107987347
NA19317_chrY	CAT	transcript	22608884	22663827	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_G0000206;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=NA19317_ch_T0000599;Name=LOC107987347
NA19317_chrY	CAT	exon	22608884	22609969	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_T0000599;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19317_ch_T0000599:0;Name=LOC107987347;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22609970	22656971	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_T0000599;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:NA19317_ch_T0000599:0;Name=LOC107987347;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22656972	22657037	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_T0000599;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19317_ch_T0000599:1;Name=LOC107987347;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22657038	22663377	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_T0000599;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:NA19317_ch_T0000599:1;Name=LOC107987347;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22663378	22663827	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=NA19317_ch_T0000599;gene_id=NA19317_ch_G0000206;Parent=NA19317_ch_T0000599;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:NA19317_ch_T0000599:2;Name=LOC107987347;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22742725	22812668	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=NA19317_ch_G0000207;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=NA19317_ch_G0000207;Name=PRORY
NA19317_chrY	CAT	transcript	22742725	22812668	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_G0000207;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=NA19317_ch_T0000600;Name=PRORY
NA19317_chrY	CAT	exon	22742725	22744099	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19317_ch_T0000600:0;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22744100	22744250	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19317_ch_T0000600:0;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22744251	22744615	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19317_ch_T0000600:1;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22744616	22744731	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19317_ch_T0000600:1;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22744732	22744788	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19317_ch_T0000600:2;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22744789	22747050	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19317_ch_T0000600:2;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22747051	22747175	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19317_ch_T0000600:3;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22747176	22812465	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:NA19317_ch_T0000600:3;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22812466	22812668	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=NA19317_ch_T0000600;gene_id=NA19317_ch_G0000207;Parent=NA19317_ch_T0000600;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:NA19317_ch_T0000600:4;Name=PRORY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22755967	22762385	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=NA19317_ch_G0000208;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=NA19317_ch_G0000208;Name=RBMY2EP
NA19317_chrY	CAT	transcript	22755967	22762385	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_G0000208;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=NA19317_ch_T0000601;Name=RBMY2EP
NA19317_chrY	CAT	exon	22755967	22756110	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19317_ch_T0000601:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22756111	22756518	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19317_ch_T0000601:0;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22756519	22756607	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19317_ch_T0000601:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22756608	22756689	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19317_ch_T0000601:1;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22756690	22756800	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19317_ch_T0000601:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22756801	22761745	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19317_ch_T0000601:2;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22761746	22761849	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19317_ch_T0000601:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22761850	22762299	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:NA19317_ch_T0000601:3;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22762300	22762385	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=NA19317_ch_T0000601;gene_id=NA19317_ch_G0000208;Parent=NA19317_ch_T0000601;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:NA19317_ch_T0000601:4;Name=RBMY2EP;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22872159	22886602	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=NA19317_ch_G0000209;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19317_ch_G0000209;Name=RBMY1A1
NA19317_chrY	CAT	transcript	22872159	22885614	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_G0000209;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000602;Name=RBMY1A1
NA19317_chrY	CAT	exon	22872159	22872306	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22872307	22874167	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874168	22874280	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874172	22874280	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22874172	22874174	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874281	22874750	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874751	22874854	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874751	22874854	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874855	22877873	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22877874	22878051	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22877874	22878051	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22878052	22879966	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22879967	22880119	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22879967	22880119	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22880120	22882129	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22882130	22882244	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22882130	22882244	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22882245	22883199	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883200	22883310	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883200	22883310	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883311	22883751	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883752	22883862	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883752	22883862	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883863	22884296	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22884297	22884407	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22884297	22884407	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22884408	22885328	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885329	22885439	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885329	22885439	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885440	22885525	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885526	22885614	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000602:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885526	22885613	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22885611	22885613	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000602;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22872159	22886602	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_G0000209;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000603;Name=RBMY1A1
NA19317_chrY	CAT	exon	22872159	22872306	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22872307	22874167	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874168	22874280	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874172	22874280	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22874172	22874174	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874281	22874750	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874751	22874854	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874751	22874854	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874855	22877873	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22877874	22878051	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22877874	22878051	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22878052	22879966	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22879967	22880119	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22879967	22880119	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22880120	22882129	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22882130	22882244	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22882130	22882244	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22882245	22883199	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883200	22883310	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883200	22883310	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883311	22883751	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883752	22883862	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883752	22883862	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883863	22884296	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22884297	22884407	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22884297	22884407	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22884408	22885525	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885526	22885614	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885526	22885614	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885615	22886025	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22886026	22886602	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000603:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22886026	22886324	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22886322	22886324	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000603;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22872159	22886602	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_G0000209;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000604;Name=RBMY1A1
NA19317_chrY	CAT	exon	22872159	22872306	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22872307	22874167	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874168	22874280	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874172	22874280	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22874172	22874174	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874281	22874750	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874751	22874854	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22874751	22874854	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874855	22877873	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22877874	22878051	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22877874	22878051	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22878052	22879966	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22879967	22880119	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22879967	22880119	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22880120	22882129	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22882130	22882244	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22882130	22882244	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22882245	22883199	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883200	22883310	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883200	22883310	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883311	22883751	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883752	22883862	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883752	22883862	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883863	22884296	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22884297	22884407	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22884297	22884407	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22884408	22885328	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885329	22885439	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885329	22885439	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885440	22885525	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885526	22885614	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885526	22885614	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885615	22886025	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22886026	22886602	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000604:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22886026	22886324	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22886322	22886324	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000604;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22872159	22886602	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_G0000209;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000605;Name=RBMY1A1
NA19317_chrY	CAT	exon	22872159	22872306	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22872307	22874167	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874168	22874280	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874281	22874750	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22874751	22874854	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22874855	22879966	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22879967	22880119	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22879996	22880119	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22879996	22879998	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22880120	22882129	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22882130	22882244	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22882130	22882244	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22882245	22883199	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883200	22883310	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883200	22883310	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883311	22883751	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22883752	22883862	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22883752	22883862	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22883863	22884296	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22884297	22884407	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22884297	22884407	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22884408	22885328	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885329	22885439	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885329	22885439	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885440	22885525	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22885526	22885614	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22885526	22885614	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22885615	22886025	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22886026	22886602	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000605:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22886026	22886324	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22886322	22886324	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000605;gene_id=NA19317_ch_G0000209;Parent=NA19317_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22895694	22910139	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=NA19317_ch_G0000210;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19317_ch_G0000210;Name=RBMY1A1
NA19317_chrY	CAT	transcript	22895694	22910139	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_G0000210;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000606;Name=RBMY1A1
NA19317_chrY	CAT	exon	22895694	22895841	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22895842	22897702	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22897703	22897815	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22897816	22898287	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22898288	22898391	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22898392	22903503	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22903504	22903656	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22903533	22903656	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22903533	22903535	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22903657	22905666	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22905667	22905781	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22905667	22905781	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22905782	22906736	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22906737	22906847	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22906737	22906847	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22906848	22907288	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907289	22907399	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907289	22907399	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907400	22907833	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907834	22907944	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907834	22907944	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907945	22908865	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22908866	22908976	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22908866	22908976	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22908977	22909062	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909063	22909151	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909063	22909151	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22909152	22909562	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909563	22910139	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000606:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909563	22909861	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22909859	22909861	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000606;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22895694	22910139	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_G0000210;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000607;Name=RBMY1A1
NA19317_chrY	CAT	exon	22895694	22895841	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22895842	22897702	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22897703	22897815	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22897707	22897815	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22897707	22897709	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22897816	22898287	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22898288	22898391	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22898288	22898391	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22898392	22901410	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22901411	22901588	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22901411	22901588	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22901589	22903503	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22903504	22903656	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22903504	22903656	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22903657	22905666	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22905667	22905781	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22905667	22905781	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22905782	22906736	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22906737	22906847	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22906737	22906847	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22906848	22907288	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907289	22907399	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907289	22907399	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907400	22907833	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907834	22907944	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907834	22907944	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907945	22909062	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909063	22909151	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909063	22909151	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22909152	22909562	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909563	22910139	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000607:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909563	22909861	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22909859	22909861	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000607;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22895694	22909151	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_G0000210;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000608;Name=RBMY1A1
NA19317_chrY	CAT	exon	22895694	22895841	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22895842	22897702	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22897703	22897815	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22897707	22897815	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22897707	22897709	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22897816	22898287	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22898288	22898391	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22898288	22898391	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22898392	22901410	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22901411	22901588	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22901411	22901588	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22901589	22903503	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22903504	22903656	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22903504	22903656	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22903657	22905666	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22905667	22905781	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22905667	22905781	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22905782	22906736	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22906737	22906847	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22906737	22906847	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22906848	22907288	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907289	22907399	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907289	22907399	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907400	22907833	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907834	22907944	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907834	22907944	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907945	22908865	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22908866	22908976	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22908866	22908976	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22908977	22909062	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909063	22909151	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000608:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909063	22909150	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22909148	22909150	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000608;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000608;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22895694	22910139	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_G0000210;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000609;Name=RBMY1A1
NA19317_chrY	CAT	exon	22895694	22895841	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22895842	22897702	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22897703	22897815	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22897707	22897815	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22897707	22897709	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000609;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22897816	22898287	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22898288	22898391	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22898288	22898391	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22898392	22901410	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22901411	22901588	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22901411	22901588	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22901589	22903503	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22903504	22903656	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22903504	22903656	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22903657	22905666	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22905667	22905781	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22905667	22905781	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22905782	22906736	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22906737	22906847	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22906737	22906847	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22906848	22907288	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907289	22907399	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907289	22907399	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907400	22907833	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22907834	22907944	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22907834	22907944	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22907945	22908865	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22908866	22908976	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22908866	22908976	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22908977	22909062	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909063	22909151	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909063	22909151	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22909152	22909562	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000609:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22909563	22910139	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000609:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22909563	22909861	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000609:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22909859	22909861	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=NA19317_ch_T0000609;gene_id=NA19317_ch_G0000210;Parent=NA19317_ch_T0000609;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000609;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22919231	22933675	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=NA19317_ch_G0000211;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19317_ch_G0000211;Name=RBMY1A1
NA19317_chrY	CAT	transcript	22919231	22932687	1000	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_G0000211;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000610;Name=RBMY1A1
NA19317_chrY	CAT	exon	22919231	22919378	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22919379	22921239	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921240	22921352	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921244	22921352	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22921244	22921246	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000610;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921353	22921822	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921823	22921926	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921823	22921926	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921927	22924945	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22924946	22925123	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22924946	22925123	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22925124	22927038	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22927039	22927191	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22927039	22927191	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22927192	22929201	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22929202	22929316	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22929202	22929316	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22929317	22930271	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930272	22930382	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930272	22930382	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930383	22930823	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930824	22930934	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930824	22930934	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930935	22931368	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22931369	22931479	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22931369	22931479	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22931480	22932400	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932401	22932511	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932401	22932511	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932512	22932598	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000610:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932599	22932687	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000610:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932599	22932686	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000610:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22932684	22932686	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=NA19317_ch_T0000610;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000610;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22919231	22933675	1000	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_G0000211;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000611;Name=RBMY1A1
NA19317_chrY	CAT	exon	22919231	22919378	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22919379	22921239	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921240	22921352	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921244	22921352	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22921244	22921246	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000611;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921353	22921822	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921823	22921926	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921823	22921926	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921927	22924945	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22924946	22925123	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22924946	22925123	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22925124	22927038	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22927039	22927191	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22927039	22927191	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22927192	22929201	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22929202	22929316	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22929202	22929316	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22929317	22930271	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930272	22930382	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930272	22930382	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930383	22930823	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930824	22930934	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930824	22930934	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930935	22931368	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22931369	22931479	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22931369	22931479	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22931480	22932598	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932599	22932687	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932599	22932687	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932688	22933098	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22933099	22933675	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000611:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22933099	22933397	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22933395	22933397	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=NA19317_ch_T0000611;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000611;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22919231	22933675	1000	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_G0000211;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000612;Name=RBMY1A1
NA19317_chrY	CAT	exon	22919231	22919378	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22919379	22921239	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921240	22921352	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921353	22921822	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921823	22921926	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921927	22927038	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22927039	22927191	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22927068	22927191	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22927068	22927070	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000612;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22927192	22929201	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22929202	22929316	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22929202	22929316	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22929317	22930271	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930272	22930382	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930272	22930382	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930383	22930823	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930824	22930934	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930824	22930934	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930935	22931368	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22931369	22931479	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22931369	22931479	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22931480	22932400	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932401	22932511	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932401	22932511	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932512	22932598	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932599	22932687	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932599	22932687	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932688	22933098	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000612:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22933099	22933675	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000612:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22933099	22933397	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000612:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22933395	22933397	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=NA19317_ch_T0000612;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000612;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000612;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22919231	22933675	1000	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_G0000211;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000613;Name=RBMY1A1
NA19317_chrY	CAT	exon	22919231	22919378	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22919379	22921239	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921240	22921352	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921244	22921352	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22921244	22921246	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000613;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921353	22921822	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22921823	22921926	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22921823	22921926	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22921927	22924945	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22924946	22925123	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22924946	22925123	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22925124	22927038	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22927039	22927191	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22927039	22927191	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22927192	22929201	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22929202	22929316	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22929202	22929316	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22929317	22930271	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930272	22930382	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930272	22930382	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930383	22930823	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22930824	22930934	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22930824	22930934	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22930935	22931368	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22931369	22931479	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22931369	22931479	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22931480	22932400	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932401	22932511	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932401	22932511	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932512	22932598	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22932599	22932687	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22932599	22932687	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22932688	22933098	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000613:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22933099	22933675	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000613:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22933099	22933397	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000613:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22933395	22933397	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=NA19317_ch_T0000613;gene_id=NA19317_ch_G0000211;Parent=NA19317_ch_T0000613;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000613;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22936547	22968858	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=NA19317_ch_G0000212;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000212;Name=RBMY1D
NA19317_chrY	CAT	transcript	22936547	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000614;Name=RBMY1D
NA19317_chrY	CAT	exon	22936547	22936567	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22936568	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22955938	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22955939	22956049	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22955939	22956049	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956050	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000614:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000614;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000615;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22955938	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22955939	22956049	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22955939	22956049	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956050	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000615:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000615;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000616;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000616:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000616:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000616:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000616;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000617;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22943587	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22943588	22943652	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22943653	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944838	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944838	22944840	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000617;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945374	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945375	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945375	22945464	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000617:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000617:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000617;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000617;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000618;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000618;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000618:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000618;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000618;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22958631	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000619;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000619;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22955938	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22955939	22956049	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22955939	22956049	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956050	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22957472	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000619:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22957473	22958631	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000619:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22957473	22957480	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000619:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22957478	22957480	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000619;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000619;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22942767	22968858	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000620;Name=RBMY1D
NA19317_chrY	CAT	exon	22942767	22942914	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22942915	22944775	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22944776	22944888	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22944780	22944888	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22944780	22944782	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000620;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22944889	22945360	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22945361	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22945361	22945464	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22948483	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22948484	22948661	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22948484	22948661	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22948662	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950577	22950729	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22955938	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22955939	22956049	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22955939	22956049	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956050	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:9;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22967474	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000620:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22967475	22968858	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000620:11;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22967475	22967551	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000620:10;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22967549	22967551	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000620;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000620;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000620;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	22945375	22957213	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_G0000212;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=NA19317_ch_T0000621;Name=RBMY1D
NA19317_chrY	CAT	exon	22945375	22945464	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22945465	22950576	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22950577	22950729	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22950606	22950729	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:0;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	22950606	22950608	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:NA19317_ch_T0000621;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22950730	22952739	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22952740	22952854	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22952740	22952854	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:1;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22952855	22953809	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22953810	22953920	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22953810	22953920	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:2;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22953921	22954361	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954362	22954472	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954362	22954472	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:3;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22954473	22954906	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22954907	22955017	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22954907	22955017	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:4;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22955018	22955938	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22955939	22956049	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22955939	22956049	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:5;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956050	22956136	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956137	22956225	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956137	22956225	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:6;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22956226	22956636	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:NA19317_ch_T0000621:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22956637	22957213	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:NA19317_ch_T0000621:8;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	22956637	22956935	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:NA19317_ch_T0000621:7;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	22956933	22956935	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000621;gene_id=NA19317_ch_G0000212;Parent=NA19317_ch_T0000621;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:NA19317_ch_T0000621;Name=RBMY1D;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22976904	22979156	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=NA19317_ch_G0000213;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=NA19317_ch_G0000213;Name=LOC105379266
NA19317_chrY	CAT	transcript	22976904	22979156	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000622;gene_id=NA19317_ch_G0000213;Parent=NA19317_ch_G0000213;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=NA19317_ch_T0000622;Name=LOC105379266
NA19317_chrY	CAT	exon	22976904	22978184	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000622;gene_id=NA19317_ch_G0000213;Parent=NA19317_ch_T0000622;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:NA19317_ch_T0000622:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22978185	22978861	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000622;gene_id=NA19317_ch_G0000213;Parent=NA19317_ch_T0000622;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:NA19317_ch_T0000622:0;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22978862	22979156	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=NA19317_ch_T0000622;gene_id=NA19317_ch_G0000213;Parent=NA19317_ch_T0000622;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:NA19317_ch_T0000622:1;Name=LOC105379266;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	22991461	23002527	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=NA19317_ch_G0000214;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=NA19317_ch_G0000214;Name=TTTY13
NA19317_chrY	CAT	transcript	22991461	23002527	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_G0000214;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=NA19317_ch_T0000623;Name=TTTY13
NA19317_chrY	CAT	exon	22991461	22991523	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:0;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22991524	22992643	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19317_ch_T0000623:0;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22992644	22992735	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:1;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22992736	22995361	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19317_ch_T0000623:1;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22995362	22995523	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:2;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22995524	22997132	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19317_ch_T0000623:2;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22997133	22997231	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:3;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22997232	22997826	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19317_ch_T0000623:3;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	22997827	22997988	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:4;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	22997989	23002446	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:NA19317_ch_T0000623:4;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23002447	23002527	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=NA19317_ch_T0000623;gene_id=NA19317_ch_G0000214;Parent=NA19317_ch_T0000623;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:NA19317_ch_T0000623:5;Name=TTTY13;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23177268	23191919	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=NA19317_ch_G0000215;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=NA19317_ch_G0000215;Name=LOC105377236
NA19317_chrY	CAT	transcript	23177268	23190693	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19317_ch_T0000624;Name=LOC105377236
NA19317_chrY	CAT	exon	23177268	23178811	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000624:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23178812	23186190	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000624:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23186191	23186326	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000624:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23186327	23189322	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000624:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189323	23189484	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000624:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23189485	23189728	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000624:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189729	23190693	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=NA19317_ch_T0000624;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000624:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23177268	23190693	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19317_ch_T0000625;Name=LOC105377236
NA19317_chrY	CAT	exon	23177268	23178811	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000625:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23178812	23186190	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000625:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23186191	23186326	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000625:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23186327	23189322	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000625:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189323	23189397	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000625:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23189398	23189728	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000625:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189729	23190693	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=NA19317_ch_T0000625;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000625;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000625:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23177268	23191919	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_G0000215;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=NA19317_ch_T0000626;Name=LOC105377236
NA19317_chrY	CAT	exon	23177268	23178811	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000626:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23178812	23186190	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000626:0;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23186191	23186326	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000626:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23186327	23189322	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000626:1;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189323	23189484	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000626:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23189485	23189728	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000626:2;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23189729	23190514	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000626:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23190515	23191763	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:NA19317_ch_T0000626:3;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23191764	23191919	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=NA19317_ch_T0000626;gene_id=NA19317_ch_G0000215;Parent=NA19317_ch_T0000626;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:NA19317_ch_T0000626:4;Name=LOC105377236;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23204382	23207270	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=NA19317_ch_G0000216;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=NA19317_ch_G0000216;Name=LOC105377237
NA19317_chrY	CAT	transcript	23204382	23207270	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_G0000216;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=NA19317_ch_T0000627;Name=LOC105377237
NA19317_chrY	CAT	exon	23204382	23205619	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_T0000627;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19317_ch_T0000627:0;Name=LOC105377237;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23205620	23206791	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_T0000627;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:NA19317_ch_T0000627:0;Name=LOC105377237;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23206792	23206951	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_T0000627;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19317_ch_T0000627:1;Name=LOC105377237;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23206952	23207111	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_T0000627;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:NA19317_ch_T0000627:1;Name=LOC105377237;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23207112	23207270	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=NA19317_ch_T0000627;gene_id=NA19317_ch_G0000216;Parent=NA19317_ch_T0000627;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:NA19317_ch_T0000627:2;Name=LOC105377237;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23248177	23262626	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=NA19317_ch_G0000217;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=NA19317_ch_G0000217;Name=RBMY1A1
NA19317_chrY	CAT	transcript	23248177	23262626	1000	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_G0000217;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000628;Name=RBMY1A1
NA19317_chrY	CAT	exon	23248177	23248753	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23248455	23248753	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23248455	23248457	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000628;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23248754	23249164	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249165	23249253	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249165	23249253	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249254	23250371	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250372	23250482	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250372	23250482	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23250483	23250916	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250917	23251027	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250917	23251027	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251028	23251468	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23251469	23251579	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23251469	23251579	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251580	23252534	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23252535	23252649	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23252535	23252649	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23252650	23254659	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23254660	23254812	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23254660	23254812	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23254813	23256727	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23256728	23256905	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23256728	23256905	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23256906	23259924	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23259925	23260028	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23259925	23260028	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260029	23260504	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23260505	23260617	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23260505	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23260611	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000628;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260618	23262478	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23262479	23262626	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=NA19317_ch_T0000628;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000628;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000628:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23248177	23262626	1000	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_G0000217;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000629;Name=RBMY1A1
NA19317_chrY	CAT	exon	23248177	23248753	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23248455	23248753	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23248455	23248457	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000629;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23248754	23249164	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249165	23249253	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249165	23249253	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249254	23249339	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249340	23249450	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249340	23249450	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249451	23250371	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250372	23250482	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250372	23250482	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23250483	23250916	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250917	23251027	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250917	23251027	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251028	23251468	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23251469	23251579	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23251469	23251579	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251580	23252534	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23252535	23252649	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23252535	23252649	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23252650	23254659	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23254660	23254812	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23254660	23254783	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23254781	23254783	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000629;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23254813	23259924	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23259925	23260028	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260029	23260504	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23260505	23260617	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260618	23262478	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000629:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23262479	23262626	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=NA19317_ch_T0000629;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000629;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000629:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23248177	23262626	1000	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_G0000217;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000630;Name=RBMY1A1
NA19317_chrY	CAT	exon	23248177	23248753	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23248455	23248753	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23248455	23248457	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000630;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23248754	23249164	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249165	23249253	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249165	23249253	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249254	23249339	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249340	23249450	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249340	23249450	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249451	23250371	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250372	23250482	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250372	23250482	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23250483	23250916	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250917	23251027	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250917	23251027	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251028	23251468	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23251469	23251579	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23251469	23251579	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251580	23252534	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23252535	23252649	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23252535	23252649	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23252650	23254659	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23254660	23254812	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23254660	23254812	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23254813	23256727	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23256728	23256905	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23256728	23256905	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23256906	23259924	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23259925	23260028	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23259925	23260028	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260029	23260504	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23260505	23260617	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23260505	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000630:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23260611	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000630;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260618	23262478	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000630:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23262479	23262626	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=NA19317_ch_T0000630;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000630;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000630:11;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23249165	23262626	1000	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_G0000217;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=NA19317_ch_T0000631;Name=RBMY1A1
NA19317_chrY	CAT	exon	23249165	23249253	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249166	23249253	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23249166	23249168	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:NA19317_ch_T0000631;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249254	23249339	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:0;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23249340	23249450	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23249340	23249450	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23249451	23250371	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:1;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250372	23250482	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250372	23250482	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23250483	23250916	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:2;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23250917	23251027	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23250917	23251027	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251028	23251468	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:3;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23251469	23251579	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23251469	23251579	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23251580	23252534	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:4;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23252535	23252649	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23252535	23252649	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23252650	23254659	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:5;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23254660	23254812	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23254660	23254812	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23254813	23256727	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:6;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23256728	23256905	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23256728	23256905	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23256906	23259924	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:7;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23259925	23260028	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23259925	23260028	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260029	23260504	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:8;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23260505	23260617	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23260505	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:NA19317_ch_T0000631:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23260611	23260613	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:NA19317_ch_T0000631;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23260618	23262478	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:NA19317_ch_T0000631:9;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23262479	23262626	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=NA19317_ch_T0000631;gene_id=NA19317_ch_G0000217;Parent=NA19317_ch_T0000631;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:NA19317_ch_T0000631:10;Name=RBMY1A1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23270278	23286129	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=NA19317_ch_G0000218;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000218;Name=RBMY1E
NA19317_chrY	CAT	transcript	23270278	23286129	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19317_ch_T0000632;Name=RBMY1E
NA19317_chrY	CAT	exon	23270278	23271459	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23271452	23271459	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23271452	23271454	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19317_ch_T0000632;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23271460	23272706	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272707	23272795	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272707	23272795	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272796	23272881	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272882	23272992	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272882	23272992	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272993	23273913	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23273914	23274024	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23273914	23274024	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274025	23274458	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23274459	23274569	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23274459	23274569	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274570	23275010	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23275011	23275121	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23275011	23275121	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23275122	23276076	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23276077	23276191	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23276077	23276191	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23276192	23278201	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23278202	23278354	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23278202	23278354	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23278355	23280269	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23280270	23280447	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23280270	23280447	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23280448	23283466	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23283467	23283570	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23283467	23283570	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23283571	23284042	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23284043	23284155	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23284043	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23284149	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19317_ch_T0000632;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23284156	23286016	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23286017	23286129	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000632;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000632:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23271723	23283557	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19317_ch_T0000633;Name=RBMY1E
NA19317_chrY	CAT	exon	23271723	23272295	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23271997	23272295	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23271997	23271999	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19317_ch_T0000633;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272296	23272706	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272707	23272795	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272707	23272795	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272796	23272881	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272882	23272992	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272882	23272992	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272993	23273913	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23273914	23274024	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23273914	23274024	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274025	23274458	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23274459	23274569	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23274459	23274569	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274570	23275010	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23275011	23275121	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23275011	23275121	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23275122	23276076	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23276077	23276191	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23276077	23276191	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23276192	23278201	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23278202	23278354	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23278202	23278325	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23278323	23278325	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19317_ch_T0000633;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23278355	23283466	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23283467	23283557	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000633;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000633:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23271723	23286129	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19317_ch_T0000634;Name=RBMY1E
NA19317_chrY	CAT	exon	23271723	23272295	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23271997	23272295	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23271997	23271999	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19317_ch_T0000634;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272296	23272706	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272707	23272795	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272707	23272795	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272796	23272881	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272882	23272992	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272882	23272992	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272993	23273913	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23273914	23274024	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23273914	23274024	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274025	23274458	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23274459	23274569	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23274459	23274569	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274570	23275010	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23275011	23275121	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23275011	23275121	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23275122	23276076	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23276077	23276191	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23276077	23276191	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23276192	23278201	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23278202	23278354	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23278202	23278354	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23278355	23280269	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23280270	23280447	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23280270	23280447	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23280448	23283466	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23283467	23283570	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23283467	23283570	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23283571	23284042	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23284043	23284155	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23284043	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000634:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23284149	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19317_ch_T0000634;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23284156	23286016	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000634:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23286017	23286129	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000634;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000634:11;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23271723	23286129	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19317_ch_T0000635;Name=RBMY1E
NA19317_chrY	CAT	exon	23271723	23272295	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23271997	23272295	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23271997	23271999	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19317_ch_T0000635;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272296	23272706	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272707	23272795	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272707	23272795	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272796	23273913	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23273914	23274024	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23273914	23274024	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274025	23274458	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23274459	23274569	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23274459	23274569	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23274570	23275010	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23275011	23275121	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23275011	23275121	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23275122	23276076	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23276077	23276191	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23276077	23276191	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23276192	23278201	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23278202	23278354	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23278202	23278354	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23278355	23280269	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23280270	23280447	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23280270	23280447	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23280448	23283466	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23283467	23283570	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23283467	23283570	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23283571	23284042	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23284043	23284155	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23284043	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000635:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23284149	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19317_ch_T0000635;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23284156	23286016	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000635:9;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23286017	23286129	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000635;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000635;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000635:10;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23271723	23286129	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_G0000218;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=NA19317_ch_T0000636;Name=RBMY1E
NA19317_chrY	CAT	exon	23271723	23272295	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23271997	23272295	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23271997	23271999	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:NA19317_ch_T0000636;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272296	23272706	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:0;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23272707	23272795	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23272707	23272795	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23272796	23275010	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:1;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23275011	23275121	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23275011	23275121	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23275122	23276076	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:2;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23276077	23276191	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23276077	23276191	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23276192	23278201	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:3;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23278202	23278354	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23278202	23278354	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23278355	23280269	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:4;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23280270	23280447	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23280270	23280447	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23280448	23283466	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:5;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23283467	23283570	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23283467	23283570	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23283571	23284042	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:6;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23284043	23284155	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23284043	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:NA19317_ch_T0000636:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23284149	23284151	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:NA19317_ch_T0000636;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23284156	23286016	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:NA19317_ch_T0000636:7;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23286017	23286129	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000636;gene_id=NA19317_ch_G0000218;Parent=NA19317_ch_T0000636;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:NA19317_ch_T0000636:8;Name=RBMY1E;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23396419	23398446	.	+	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;gene_id=NA19317_ch_G0000219;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=NA19317_ch_G0000219;Name=LOC107987356
NA19317_chrY	CAT	transcript	23396419	23398446	1000	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_G0000219;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=NA19317_ch_T0000637;Name=LOC107987356
NA19317_chrY	CAT	exon	23396419	23396531	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_T0000637;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19317_ch_T0000637:0;Name=LOC107987356;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23396532	23396648	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_T0000637;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:NA19317_ch_T0000637:0;Name=LOC107987356;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23396649	23396709	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_T0000637;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19317_ch_T0000637:1;Name=LOC107987356;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23396710	23398244	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_T0000637;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:NA19317_ch_T0000637:1;Name=LOC107987356;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23398245	23398446	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=NA19317_ch_T0000637;gene_id=NA19317_ch_G0000219;Parent=NA19317_ch_T0000637;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:NA19317_ch_T0000637:2;Name=LOC107987356;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23439852	23464103	.	-	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;gene_id=NA19317_ch_G0000220;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff;ID=NA19317_ch_G0000220;Name=PRY2
NA19317_chrY	CAT	transcript	23439852	23464103	100	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_G0000220;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=NA19317_ch_T0000638;Name=PRY2
NA19317_chrY	CAT	exon	23439852	23440677	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19317_ch_T0000638:0;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23440419	23440677	.	-	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19317_ch_T0000638:0;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23440419	23440421	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:NA19317_ch_T0000638;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23440678	23450175	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19317_ch_T0000638:0;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23450176	23450291	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19317_ch_T0000638:1;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23450176	23450291	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19317_ch_T0000638:1;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23450292	23452866	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19317_ch_T0000638:1;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23452867	23452987	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19317_ch_T0000638:2;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23452867	23452935	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:NA19317_ch_T0000638:2;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23452933	23452935	.	-	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:NA19317_ch_T0000638;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23452988	23463827	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19317_ch_T0000638:2;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23463828	23463914	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19317_ch_T0000638:3;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23463915	23464015	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:NA19317_ch_T0000638:3;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23464016	23464103	.	-	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_486.1,hg002_chrY_paternal_486.1;transcript_id=NA19317_ch_T0000638;gene_id=NA19317_ch_G0000220;Parent=NA19317_ch_T0000638;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:NA19317_ch_T0000638:4;Name=PRY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23469789	23515575	.	-	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;gene_id=NA19317_ch_G0000221;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=NA19317_ch_G0000221;Name=LOC101929148
NA19317_chrY	CAT	transcript	23469789	23515575	1000	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_G0000221;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=NA19317_ch_T0000639;Name=LOC101929148
NA19317_chrY	CAT	exon	23469789	23470466	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:0;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23470467	23470981	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:0;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23470982	23471099	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:1;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23471100	23471643	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:1;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23471644	23471840	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:2;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23471841	23471960	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:2;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23471961	23472046	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:3;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23472047	23473846	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:3;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23473847	23474182	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:4;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23474183	23475648	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:4;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23475649	23475738	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:5;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23475739	23489375	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:5;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23489376	23489729	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:6;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23489730	23490159	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:6;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23490160	23490278	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:7;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23490279	23497456	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:7;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23497457	23497542	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:8;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23497543	23497850	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:8;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23497851	23498073	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:9;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23498074	23508042	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:9;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23508043	23508183	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:10;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23508184	23514730	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:10;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23514731	23515040	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:11;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23515041	23515374	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:NA19317_ch_T0000639:11;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23515375	23515575	.	-	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;transcript_id=NA19317_ch_T0000639;gene_id=NA19317_ch_G0000221;Parent=NA19317_ch_T0000639;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:NA19317_ch_T0000639:12;Name=LOC101929148;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23513056	23514922	.	+	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;gene_id=NA19317_ch_G0000222;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=NA19317_ch_G0000222;Name=TTTY6
NA19317_chrY	CAT	transcript	23513056	23514922	1000	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_G0000222;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=NA19317_ch_T0000640;Name=TTTY6
NA19317_chrY	CAT	exon	23513056	23513170	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_T0000640;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19317_ch_T0000640:0;Name=TTTY6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23513171	23513388	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_T0000640;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:NA19317_ch_T0000640:0;Name=TTTY6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23513389	23513526	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_T0000640;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19317_ch_T0000640:1;Name=TTTY6;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23513527	23514683	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_T0000640;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:NA19317_ch_T0000640:1;Name=TTTY6;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23514684	23514922	.	+	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;transcript_id=NA19317_ch_T0000640;gene_id=NA19317_ch_G0000222;Parent=NA19317_ch_T0000640;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:NA19317_ch_T0000640:2;Name=TTTY6;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23529646	23551103	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1;gene_id=NA19317_ch_G0000223;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=augTM,transMap;ID=NA19317_ch_G0000223;Name=RBMY1J
NA19317_chrY	CAT	transcript	23529646	23551103	10000	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19317_ch_T0000641;Name=RBMY1J
NA19317_chrY	CAT	exon	23529646	23531149	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23531139	23531149	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23531139	23531141	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19317_ch_T0000641;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23531150	23533742	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23533743	23533889	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23533743	23533889	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23533890	23537622	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537623	23537711	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537623	23537711	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537712	23537797	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537798	23537908	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537798	23537908	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537909	23538831	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23538832	23538942	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23538832	23538942	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23538943	23539376	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539377	23539487	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539377	23539487	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23539488	23539927	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539928	23540038	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539928	23540038	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23540039	23540993	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23540994	23541108	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23540994	23541108	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23541109	23543118	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23543119	23543271	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23543119	23543271	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23543272	23545186	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23545187	23545364	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23545187	23545364	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23545365	23548387	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548388	23548491	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548388	23548491	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23548492	23548955	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548956	23549068	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548956	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000641:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23549062	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19317_ch_T0000641;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23549069	23550929	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000641:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23550930	23551103	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000641;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000641:12;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23536635	23548479	10000	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19317_ch_T0000642;Name=RBMY1J
NA19317_chrY	CAT	exon	23536635	23537211	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23536913	23537211	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23536913	23536915	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19317_ch_T0000642;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537212	23537622	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537623	23537711	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537623	23537711	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537712	23537797	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537798	23537908	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537798	23537908	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537909	23538831	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23538832	23538942	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23538832	23538942	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23538943	23539376	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539377	23539487	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539377	23539487	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23539488	23539927	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539928	23540038	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539928	23540038	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23540039	23540993	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23540994	23541108	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23540994	23541108	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23541109	23543118	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23543119	23543271	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23543119	23543242	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23543240	23543242	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19317_ch_T0000642;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23543272	23548387	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548388	23548479	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000642;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000642:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23536635	23551103	10000	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19317_ch_T0000643;Name=RBMY1J
NA19317_chrY	CAT	exon	23536635	23537211	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23536913	23537211	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23536913	23536915	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19317_ch_T0000643;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537212	23537622	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537623	23537711	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537623	23537711	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537712	23537797	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537798	23537908	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537798	23537908	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537909	23538831	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23538832	23538942	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23538832	23538942	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23538943	23539376	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539377	23539487	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539377	23539487	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23539488	23539927	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539928	23540038	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539928	23540038	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23540039	23540993	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23540994	23541108	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23540994	23541108	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23541109	23543118	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23543119	23543271	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23543119	23543271	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23543272	23545186	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23545187	23545364	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23545187	23545364	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23545365	23548387	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548388	23548491	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548388	23548491	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23548492	23548955	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548956	23549068	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548956	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000643:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23549062	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19317_ch_T0000643;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23549069	23550929	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000643:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23550930	23551103	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000643;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000643;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000643:11;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23536635	23551103	10000	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_G0000223;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=NA19317_ch_T0000644;Name=RBMY1J
NA19317_chrY	CAT	exon	23536635	23537211	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23536913	23537211	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23536913	23536915	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:NA19317_ch_T0000644;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537212	23537622	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:0;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23537623	23537711	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23537623	23537711	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23537712	23538831	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:1;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23538832	23538942	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23538832	23538942	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23538943	23539376	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:2;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539377	23539487	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539377	23539487	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23539488	23539927	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:3;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23539928	23540038	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23539928	23540038	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23540039	23540993	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:4;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23540994	23541108	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23540994	23541108	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23541109	23543118	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:5;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23543119	23543271	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23543119	23543271	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23543272	23545186	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:6;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23545187	23545364	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23545187	23545364	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23545365	23548387	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:7;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548388	23548491	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548388	23548491	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23548492	23548955	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:8;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23548956	23549068	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23548956	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:NA19317_ch_T0000644:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23549062	23549064	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:NA19317_ch_T0000644;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23549069	23550929	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:NA19317_ch_T0000644:9;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23550930	23551103	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000644;gene_id=NA19317_ch_G0000223;Parent=NA19317_ch_T0000644;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:NA19317_ch_T0000644:10;Name=RBMY1J;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23634128	23637834	.	-	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;gene_id=NA19317_ch_G0000224;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=NA19317_ch_G0000224;Name=LOC100652931
NA19317_chrY	CAT	transcript	23634128	23637834	1000	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_G0000224;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=NA19317_ch_T0000645;Name=LOC100652931
NA19317_chrY	CAT	exon	23634128	23634149	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19317_ch_T0000645:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23634150	23635614	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19317_ch_T0000645:0;Name=LOC100652931;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23635615	23635729	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19317_ch_T0000645:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23635730	23637764	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:NA19317_ch_T0000645:1;Name=LOC100652931;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23637765	23637834	.	-	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1,hg002_chrY_paternal_494.1;transcript_id=NA19317_ch_T0000645;gene_id=NA19317_ch_G0000224;Parent=NA19317_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:NA19317_ch_T0000645:2;Name=LOC100652931;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23638307	23645653	.	-	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;gene_id=NA19317_ch_G0000225;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=NA19317_ch_G0000225;Name=RBMY2FP
NA19317_chrY	CAT	transcript	23638307	23645653	1000	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_G0000225;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=NA19317_ch_T0000646;Name=RBMY2FP
NA19317_chrY	CAT	exon	23638307	23640019	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19317_ch_T0000646:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23640020	23643013	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19317_ch_T0000646:0;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23643014	23643117	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19317_ch_T0000646:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23643118	23643539	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19317_ch_T0000646:1;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23643540	23643652	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19317_ch_T0000646:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23643653	23645541	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:NA19317_ch_T0000646:2;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23645542	23645653	.	-	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1,hg002_chrY_paternal_495.1;transcript_id=NA19317_ch_T0000646;gene_id=NA19317_ch_G0000225;Parent=NA19317_ch_T0000646;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:NA19317_ch_T0000646:3;Name=RBMY2FP;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23655650	23657728	.	+	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;gene_id=NA19317_ch_G0000226;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=NA19317_ch_G0000226;Name=TTTY5
NA19317_chrY	CAT	transcript	23655650	23657728	1000	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19317_ch_T0000647;gene_id=NA19317_ch_G0000226;Parent=NA19317_ch_G0000226;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=NA19317_ch_T0000647;Name=TTTY5
NA19317_chrY	CAT	exon	23655650	23656220	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19317_ch_T0000647;gene_id=NA19317_ch_G0000226;Parent=NA19317_ch_T0000647;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19317_ch_T0000647:0;Name=TTTY5;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23656221	23656737	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19317_ch_T0000647;gene_id=NA19317_ch_G0000226;Parent=NA19317_ch_T0000647;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:NA19317_ch_T0000647:0;Name=TTTY5;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23656738	23657728	.	+	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1,hg002_chrY_paternal_497.1;transcript_id=NA19317_ch_T0000647;gene_id=NA19317_ch_G0000226;Parent=NA19317_ch_T0000647;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:NA19317_ch_T0000647:1;Name=TTTY5;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23771628	23791670	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1;gene_id=NA19317_ch_G0000227;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=augTM,transMap;ID=NA19317_ch_G0000227;Name=RBMY1F
NA19317_chrY	CAT	transcript	23771628	23786013	10000	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000648;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784739	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784740	23784850	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784740	23784850	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23784851	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785020	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785020	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785021	23785436	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23785437	23786013	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000648:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23785437	23785509	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23785507	23785509	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000648;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23771628	23786013	10000	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000649;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000649;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785025	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785025	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785026	23785436	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23785437	23786013	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000649:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23785437	23785735	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23785733	23785735	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000649;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000649;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23771628	23786013	10000	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000650;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000650;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784739	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784740	23784850	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784740	23784850	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23784851	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785025	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785025	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785026	23785436	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23785437	23786013	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000650:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23785437	23785735	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23785733	23785735	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000650;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000650;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23771628	23791670	10000	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000651;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000651;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784739	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784740	23784850	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784740	23784850	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23784851	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785025	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785025	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785026	23788758	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23788759	23788905	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23788759	23788905	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23788906	23791498	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000651:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23791499	23791670	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000651:12;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23791499	23791509	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000651:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23791507	23791509	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000651;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000651;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23771628	23791670	10000	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000652;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000652;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785025	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785025	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785026	23788758	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23788759	23788905	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23788759	23788905	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23788906	23791498	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000652:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23791499	23791670	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000652:11;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23791499	23791509	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000652:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23791507	23791509	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000652;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000652;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000652;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	23771628	23791670	10000	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_G0000227;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=NA19317_ch_T0000653;Name=RBMY1F
NA19317_chrY	CAT	exon	23771628	23771716	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23771717	23773577	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23773578	23773690	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23773582	23773690	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:0;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23773582	23773584	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:NA19317_ch_T0000653;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23773691	23774156	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23774157	23774260	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23774157	23774260	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:1;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23774261	23777283	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23777284	23777461	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23777284	23777461	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:2;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23777462	23779376	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23779377	23779529	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23779377	23779529	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:3;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23779530	23781539	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23781540	23781654	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23781540	23781654	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:4;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23781655	23782609	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23782610	23782720	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23782610	23782720	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:5;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23782721	23783160	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783161	23783271	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783161	23783271	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:6;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783272	23783705	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23783706	23783816	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23783706	23783816	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:7;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23783817	23784936	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23784937	23785025	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23784937	23785025	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:8;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23785026	23791498	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:NA19317_ch_T0000653:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23791499	23791670	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:NA19317_ch_T0000653:10;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23791499	23791509	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:NA19317_ch_T0000653:9;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23791507	23791509	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000653;gene_id=NA19317_ch_G0000227;Parent=NA19317_ch_T0000653;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:NA19317_ch_T0000653;Name=RBMY1F;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23807017	23852850	.	+	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;gene_id=NA19317_ch_G0000228;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=NA19317_ch_G0000228;Name=LOC102725532
NA19317_chrY	CAT	transcript	23807017	23852850	1000	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_G0000228;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=NA19317_ch_T0000654;Name=LOC102725532
NA19317_chrY	CAT	exon	23807017	23807273	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:0;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23807274	23807607	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:0;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23807608	23807917	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:1;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23807918	23814456	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:1;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23814457	23814597	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:2;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23814598	23824565	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:2;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23824566	23824788	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:3;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23824789	23825096	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:3;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23825097	23825182	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:4;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23825183	23832360	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:4;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23832361	23832479	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:5;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23832480	23832909	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:5;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23832910	23833263	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:6;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23833264	23846900	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:6;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23846901	23846990	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:7;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23846991	23848456	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:7;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23848457	23848792	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:8;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23848793	23850592	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:8;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23850593	23850678	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:9;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23850679	23850798	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:9;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23850799	23850995	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:10;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23850996	23851539	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:10;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23851540	23851657	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:11;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23851658	23852172	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:NA19317_ch_T0000654:11;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23852173	23852850	.	+	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;transcript_id=NA19317_ch_T0000654;gene_id=NA19317_ch_G0000228;Parent=NA19317_ch_T0000654;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:NA19317_ch_T0000654:12;Name=LOC102725532;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23807723	23809570	.	-	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;gene_id=NA19317_ch_G0000229;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=NA19317_ch_G0000229;Name=TTTY6B
NA19317_chrY	CAT	transcript	23807723	23809570	1000	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_G0000229;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=NA19317_ch_T0000655;Name=TTTY6B
NA19317_chrY	CAT	exon	23807723	23807964	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_T0000655;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19317_ch_T0000655:0;Name=TTTY6B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23807965	23809121	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_T0000655;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:NA19317_ch_T0000655:0;Name=TTTY6B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23809122	23809259	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_T0000655;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19317_ch_T0000655:1;Name=TTTY6B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23809260	23809477	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_T0000655;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:NA19317_ch_T0000655:1;Name=TTTY6B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23809478	23809570	.	-	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;transcript_id=NA19317_ch_T0000655;gene_id=NA19317_ch_G0000229;Parent=NA19317_ch_T0000655;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:NA19317_ch_T0000655:2;Name=TTTY6B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23858536	23882774	.	+	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;gene_id=NA19317_ch_G0000230;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff;ID=NA19317_ch_G0000230;Name=PRY
NA19317_chrY	CAT	transcript	23858536	23882774	100	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_G0000230;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=NA19317_ch_T0000656;Name=PRY
NA19317_chrY	CAT	exon	23858536	23858623	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19317_ch_T0000656:0;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23858624	23858724	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19317_ch_T0000656:0;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23858725	23858811	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19317_ch_T0000656:1;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23858812	23869651	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19317_ch_T0000656:1;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23869652	23869772	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19317_ch_T0000656:2;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23869704	23869772	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19317_ch_T0000656:0;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	23869704	23869706	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:NA19317_ch_T0000656;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23869773	23872347	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19317_ch_T0000656:2;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23872348	23872463	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19317_ch_T0000656:3;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23872348	23872463	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19317_ch_T0000656:1;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23872464	23881948	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:NA19317_ch_T0000656:3;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23881949	23882774	.	+	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:NA19317_ch_T0000656:4;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	23881949	23882207	.	+	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:NA19317_ch_T0000656:2;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	23882205	23882207	.	+	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_505.1,hg002_chrY_paternal_505.1;transcript_id=NA19317_ch_T0000656;gene_id=NA19317_ch_G0000230;Parent=NA19317_ch_T0000656;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:NA19317_ch_T0000656;Name=PRY;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	23924183	23926180	.	-	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;gene_id=NA19317_ch_G0000231;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=NA19317_ch_G0000231;Name=LOC107987357
NA19317_chrY	CAT	transcript	23924183	23926180	1000	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_G0000231;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=NA19317_ch_T0000657;Name=LOC107987357
NA19317_chrY	CAT	exon	23924183	23924384	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_T0000657;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19317_ch_T0000657:0;Name=LOC107987357;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23924385	23925919	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_T0000657;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:NA19317_ch_T0000657:0;Name=LOC107987357;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23925920	23925980	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_T0000657;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19317_ch_T0000657:1;Name=LOC107987357;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	23925981	23926097	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_T0000657;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:NA19317_ch_T0000657:1;Name=LOC107987357;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	23926098	23926180	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=NA19317_ch_T0000657;gene_id=NA19317_ch_G0000231;Parent=NA19317_ch_T0000657;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:NA19317_ch_T0000657:2;Name=LOC107987357;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24154365	24165603	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=NA19317_ch_G0000232;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=NA19317_ch_G0000232;Name=LOC107987348
NA19317_chrY	CAT	transcript	24154365	24165603	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_G0000232;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=NA19317_ch_T0000658;Name=LOC107987348
NA19317_chrY	CAT	exon	24154365	24154820	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000658;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000658:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24154821	24160790	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000658;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19317_ch_T0000658:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24160791	24162955	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000658;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000658:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24162956	24163596	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000658;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19317_ch_T0000658:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24163597	24165603	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=NA19317_ch_T0000658;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000658;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000658:2;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	24154365	24165603	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_G0000232;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=NA19317_ch_T0000659;Name=LOC107987348
NA19317_chrY	CAT	exon	24154365	24154820	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000659;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000659:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24154821	24160322	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000659;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19317_ch_T0000659:0;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24160323	24162955	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000659;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000659:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24162956	24163596	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000659;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:NA19317_ch_T0000659:1;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24163597	24165603	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=NA19317_ch_T0000659;gene_id=NA19317_ch_G0000232;Parent=NA19317_ch_T0000659;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:NA19317_ch_T0000659:2;Name=LOC107987348;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24219737	24220868	.	+	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;gene_id=NA19317_ch_G0000233;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=NA19317_ch_G0000233;Name=TTTY17C
NA19317_chrY	CAT	transcript	24219737	24220868	1000	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=NA19317_ch_T0000660;gene_id=NA19317_ch_G0000233;Parent=NA19317_ch_G0000233;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=NA19317_ch_T0000660;Name=TTTY17C
NA19317_chrY	CAT	exon	24219737	24219796	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=NA19317_ch_T0000660;gene_id=NA19317_ch_G0000233;Parent=NA19317_ch_T0000660;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:NA19317_ch_T0000660:0;Name=TTTY17C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24219797	24220762	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=NA19317_ch_T0000660;gene_id=NA19317_ch_G0000233;Parent=NA19317_ch_T0000660;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:NA19317_ch_T0000660:0;Name=TTTY17C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24220763	24220868	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1,hg002_chrY_paternal_516.1;transcript_id=NA19317_ch_T0000660;gene_id=NA19317_ch_G0000233;Parent=NA19317_ch_T0000660;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:NA19317_ch_T0000660:1;Name=TTTY17C;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24304614	24341442	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=NA19317_ch_G0000234;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=NA19317_ch_G0000234;Name=TTTY4C
NA19317_chrY	CAT	transcript	24304614	24341442	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_G0000234;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=NA19317_ch_T0000661;Name=TTTY4C
NA19317_chrY	CAT	exon	24304614	24304774	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19317_ch_T0000661:0;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24304775	24331785	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19317_ch_T0000661:0;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24331786	24331861	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19317_ch_T0000661:1;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24331862	24333665	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19317_ch_T0000661:1;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24333666	24333773	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19317_ch_T0000661:2;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24333774	24340441	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:NA19317_ch_T0000661:2;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24340442	24341442	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=NA19317_ch_T0000661;gene_id=NA19317_ch_G0000234;Parent=NA19317_ch_T0000661;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:NA19317_ch_T0000661:3;Name=TTTY4C;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24352421	24373624	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=NA19317_ch_G0000235;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=NA19317_ch_G0000235;Name=BPY2B
NA19317_chrY	CAT	transcript	24352421	24373624	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_G0000235;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=NA19317_ch_T0000662;Name=BPY2B
NA19317_chrY	CAT	exon	24352421	24352451	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:0;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24352452	24352726	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:0;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24352727	24352849	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:1;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24352850	24355914	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:1;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24355915	24356051	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:2;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24356052	24360460	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:2;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24360461	24360579	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:3;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24360502	24360579	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19317_ch_T0000662:0;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	24360502	24360504	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:NA19317_ch_T0000662;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24360580	24362638	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:3;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24362639	24362756	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:4;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24362639	24362756	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19317_ch_T0000662:1;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24362757	24365610	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:4;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24365611	24365716	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:5;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24365611	24365716	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19317_ch_T0000662:2;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24365717	24366408	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:5;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24366409	24366533	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:6;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24366409	24366427	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:NA19317_ch_T0000662:3;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	24366425	24366427	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:NA19317_ch_T0000662;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24366534	24373083	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:6;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24373084	24373208	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:7;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24373209	24373302	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:NA19317_ch_T0000662:7;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24373303	24373624	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=NA19317_ch_T0000662;gene_id=NA19317_ch_G0000235;Parent=NA19317_ch_T0000662;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:NA19317_ch_T0000662:8;Name=BPY2B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24474505	24477842	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=NA19317_ch_G0000236;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=NA19317_ch_G0000236;Name=LOC105377242
NA19317_chrY	CAT	transcript	24474505	24477842	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_G0000236;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=NA19317_ch_T0000663;Name=LOC105377242
NA19317_chrY	CAT	exon	24474505	24474605	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000663;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000663:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24474606	24476963	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000663;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19317_ch_T0000663:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24476964	24477001	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000663;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000663:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24477002	24477663	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000663;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19317_ch_T0000663:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24477664	24477842	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000663;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000663;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000663:2;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	24474505	24477842	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_G0000236;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=NA19317_ch_T0000664;Name=LOC105377242
NA19317_chrY	CAT	exon	24474505	24474605	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000664;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000664:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24474606	24476936	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000664;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19317_ch_T0000664:0;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24476937	24477001	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000664;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000664:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24477002	24477663	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000664;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:NA19317_ch_T0000664:1;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24477664	24477842	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=NA19317_ch_T0000664;gene_id=NA19317_ch_G0000236;Parent=NA19317_ch_T0000664;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:NA19317_ch_T0000664:2;Name=LOC105377242;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24497461	24567113	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=NA19317_ch_G0000237;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=NA19317_ch_G0000237;Name=DAZ3
NA19317_chrY	CAT	transcript	24497461	24567113	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_G0000237;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=NA19317_ch_T0000665;Name=DAZ3
NA19317_chrY	CAT	exon	24497461	24499317	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24499318	24503280	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24503281	24503379	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24503316	24503379	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	24503316	24503318	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:NA19317_ch_T0000665;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24503380	24507952	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24507953	24507987	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24507953	24507987	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24507988	24508731	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24508732	24508803	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24508732	24508803	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24508804	24520901	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24520902	24520973	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24520902	24520973	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24520974	24523278	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24523279	24523350	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24523279	24523350	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24523351	24525674	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24525675	24525746	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24525675	24525746	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24525747	24528057	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24528058	24528129	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24528058	24528129	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24528130	24530453	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24530454	24530525	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24530454	24530525	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24530526	24532844	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24532845	24532916	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24532845	24532916	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24532917	24535289	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24535290	24535361	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:10;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24535290	24535361	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24535362	24547602	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:10;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24547603	24547742	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:11;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24547603	24547742	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:10;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24547743	24547831	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:11;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24547832	24547895	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:12;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24547832	24547895	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:11;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24547896	24548331	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:12;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24548332	24548383	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:13;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24548332	24548383	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:12;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24548384	24548943	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:13;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24548944	24549035	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:14;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24548944	24549035	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:13;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24549036	24549309	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:14;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24549310	24549456	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:15;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24549310	24549456	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:14;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24549457	24566902	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000665:15;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24566903	24567113	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000665:16;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24566903	24566905	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000665:15;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	24566903	24566905	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000665;gene_id=NA19317_ch_G0000237;Parent=NA19317_ch_T0000665;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:NA19317_ch_T0000665;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24587540	24654689	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=NA19317_ch_G0000238;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=augTM,transMap;ID=NA19317_ch_G0000238;Name=DAZ4
NA19317_chrY	CAT	transcript	24587540	24654689	9950	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000666;Name=DAZ4
NA19317_chrY	CAT	exon	24587540	24587849	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000666;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24587850	24594449	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24594450	24594596	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24594450	24594596	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24594597	24594870	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24594871	24594962	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24594871	24594962	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24594963	24595522	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24595523	24595574	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24595523	24595574	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24595575	24596010	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24596011	24596074	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24596011	24596074	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24596075	24596163	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24596164	24596303	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24596164	24596303	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24596304	24597703	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24597704	24597775	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24597704	24597775	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24597776	24600147	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24600148	24600219	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24600148	24600219	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24600220	24602538	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24602539	24602610	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24602539	24602610	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24602611	24631426	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24631427	24631498	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24631427	24631498	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24631499	24643348	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24643349	24643420	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24643349	24643420	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24643421	24644164	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24644165	24644199	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24644165	24644199	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24644200	24648772	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24648773	24648871	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24648773	24648836	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	24648834	24648836	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000666;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24648872	24652832	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24652833	24654689	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000666;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000666:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	24587540	24654689	9940	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000667;Name=DAZ4
NA19317_chrY	CAT	exon	24587540	24587849	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000667;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24587850	24597703	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24597704	24597775	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24597704	24597775	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24597776	24600147	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24600148	24600219	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24600148	24600219	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24600220	24602538	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24602539	24602610	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24602539	24602610	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24602611	24643348	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24643349	24643420	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24643349	24643420	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24643421	24644164	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24644165	24644199	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24644165	24644199	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24644200	24648772	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24648773	24648871	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24648773	24648836	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000667:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	24648834	24648836	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000667;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24648872	24652832	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000667:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24652833	24654689	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000667;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000667;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000667:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	24587639	24654689	9950	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_G0000238;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000668;Name=DAZ4
NA19317_chrY	CAT	exon	24587639	24587849	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	24587847	24587849	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000668;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24587850	24594449	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24594450	24594596	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24594450	24594596	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24594597	24594870	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24594871	24594962	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24594871	24594962	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24594963	24595522	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24595523	24595574	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24595523	24595574	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24595575	24596010	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24596011	24596074	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24596011	24596074	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24596075	24596163	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24596164	24596303	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24596164	24596303	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24596304	24597703	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24597704	24597775	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24597704	24597775	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24597776	24600147	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24600148	24600219	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24600148	24600219	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24600220	24602538	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24602539	24602610	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24602539	24602610	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24602611	24631426	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24631427	24631498	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24631427	24631498	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24631499	24633811	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24633812	24633883	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24633812	24633883	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24633884	24636196	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24636197	24636268	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24636197	24636268	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24636269	24638580	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24638581	24638652	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24638581	24638652	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24638653	24640964	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24640965	24641036	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24640965	24641036	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24641037	24643348	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24643349	24643420	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24643349	24643420	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24643421	24644164	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24644165	24644199	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24644165	24644199	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24644200	24648772	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24648773	24648871	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	24648773	24648836	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000668:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	24648834	24648836	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000668;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24648872	24652832	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000668:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24652833	24654689	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000668;gene_id=NA19317_ch_G0000238;Parent=NA19317_ch_T0000668;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000668:17;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24674306	24677643	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;alternative_source_transcripts=hg002_chrY_paternal_528.1;gene_id=NA19317_ch_G0000239;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=NA19317_ch_G0000239;Name=LOC105377239
NA19317_chrY	CAT	transcript	24674306	24677643	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_G0000239;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=NA19317_ch_T0000669;Name=LOC105377239
NA19317_chrY	CAT	exon	24674306	24674484	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000669:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24674485	24675146	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19317_ch_T0000669:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24675147	24675211	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000669:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24675212	24677542	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19317_ch_T0000669:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24677543	24677643	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=NA19317_ch_T0000669;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000669;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000669:2;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	24674306	24677643	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_G0000239;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=NA19317_ch_T0000670;Name=LOC105377239
NA19317_chrY	CAT	exon	24674306	24674484	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000670;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000670:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24674485	24675146	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000670;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19317_ch_T0000670:0;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24675147	24675184	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000670;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000670:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24675185	24677542	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000670;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:NA19317_ch_T0000670:1;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24677543	24677643	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=NA19317_ch_T0000670;gene_id=NA19317_ch_G0000239;Parent=NA19317_ch_T0000670;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:NA19317_ch_T0000670:2;Name=LOC105377239;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24786401	24786538	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=NA19317_ch_G0000240;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=NA19317_ch_G0000240;Name=LOC124900506
NA19317_chrY	CAT	transcript	24786401	24786538	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=NA19317_ch_T0000671;gene_id=NA19317_ch_G0000240;Parent=NA19317_ch_G0000240;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=NA19317_ch_T0000671;Name=LOC124900506
NA19317_chrY	CAT	exon	24786401	24786538	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=NA19317_ch_T0000671;gene_id=NA19317_ch_G0000240;Parent=NA19317_ch_T0000671;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:NA19317_ch_T0000671:0;Name=LOC124900506;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	24798539	24840038	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=NA19317_ch_G0000241;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=NA19317_ch_G0000241;Name=REREP1Y
NA19317_chrY	CAT	transcript	24798539	24840038	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_G0000241;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=NA19317_ch_T0000672;Name=REREP1Y
NA19317_chrY	CAT	exon	24798539	24798941	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_T0000672;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19317_ch_T0000672:0;Name=REREP1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24798942	24825759	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_T0000672;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:NA19317_ch_T0000672:0;Name=REREP1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24825760	24825832	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_T0000672;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19317_ch_T0000672:1;Name=REREP1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	24825833	24835448	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_T0000672;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:NA19317_ch_T0000672:1;Name=REREP1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	24835449	24840038	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=NA19317_ch_T0000672;gene_id=NA19317_ch_G0000241;Parent=NA19317_ch_T0000672;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:NA19317_ch_T0000672:2;Name=REREP1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25000951	25004075	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=NA19317_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=NA19317_ch_G0000242;Name=LOC107987349
NA19317_chrY	CAT	transcript	25000951	25004075	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_G0000242;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=NA19317_ch_T0000673;Name=LOC107987349
NA19317_chrY	CAT	exon	25000951	25001033	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_T0000673;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19317_ch_T0000673:0;Name=LOC107987349;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25001034	25001150	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_T0000673;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:NA19317_ch_T0000673:0;Name=LOC107987349;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25001151	25001211	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_T0000673;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19317_ch_T0000673:1;Name=LOC107987349;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25001212	25002746	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_T0000673;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:NA19317_ch_T0000673:1;Name=LOC107987349;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25002747	25004075	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=NA19317_ch_T0000673;gene_id=NA19317_ch_G0000242;Parent=NA19317_ch_T0000673;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:NA19317_ch_T0000673:2;Name=LOC107987349;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25299980	25304875	.	-	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=NA19317_ch_G0000243;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=NA19317_ch_G0000243;Name=TTTY3B
NA19317_chrY	CAT	transcript	25299980	25304875	1000	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_G0000243;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=NA19317_ch_T0000674;Name=TTTY3B
NA19317_chrY	CAT	exon	25299980	25300084	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_T0000674;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19317_ch_T0000674:0;Name=TTTY3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25300085	25302438	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_T0000674;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:NA19317_ch_T0000674:0;Name=TTTY3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25302439	25302573	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_T0000674;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19317_ch_T0000674:1;Name=TTTY3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25302574	25304771	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_T0000674;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:NA19317_ch_T0000674:1;Name=TTTY3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25304772	25304875	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=NA19317_ch_T0000674;gene_id=NA19317_ch_G0000243;Parent=NA19317_ch_T0000674;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:NA19317_ch_T0000674:2;Name=TTTY3B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25407819	25411215	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=NA19317_ch_G0000244;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=NA19317_ch_G0000244;Name=CDY1
NA19317_chrY	CAT	transcript	25407819	25411213	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_G0000244;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=NA19317_ch_T0000675;Name=CDY1
NA19317_chrY	CAT	exon	25407819	25407900	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000675;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19317_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25407901	25408675	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000675;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:NA19317_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25408676	25408875	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000675;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19317_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25408876	25409295	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000675;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:NA19317_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25409296	25411213	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=NA19317_ch_T0000675;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000675;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:NA19317_ch_T0000675:2;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	25408428	25411213	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19317_ch_T0000676;Name=CDY1
NA19317_chrY	CAT	exon	25408428	25408875	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19317_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25408803	25408875	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19317_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	25408803	25408805	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19317_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25408876	25409295	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:NA19317_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25409296	25411213	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19317_ch_T0000676:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25409296	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19317_ch_T0000676:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	25410885	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=NA19317_ch_T0000676;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19317_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	25408428	25411215	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19317_ch_T0000677;Name=CDY1
NA19317_chrY	CAT	exon	25408428	25408875	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19317_ch_T0000677:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25408855	25408875	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19317_ch_T0000677:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	25408855	25408857	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19317_ch_T0000677;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25408876	25409495	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:NA19317_ch_T0000677:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25409496	25411215	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19317_ch_T0000677:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25409496	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19317_ch_T0000677:1;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	25410885	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000677;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000677;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19317_ch_T0000677;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	25408992	25411213	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000678;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_G0000244;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=NA19317_ch_T0000678;Name=CDY1
NA19317_chrY	CAT	exon	25408992	25411213	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000678;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000678;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:NA19317_ch_T0000678:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25409265	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000678;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000678;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:NA19317_ch_T0000678:0;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	25409265	25409267	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000678;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000678;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:NA19317_ch_T0000678;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	25410885	25410887	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=NA19317_ch_T0000678;gene_id=NA19317_ch_G0000244;Parent=NA19317_ch_T0000678;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:NA19317_ch_T0000678;Name=CDY1;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25546626	25550423	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=NA19317_ch_G0000245;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=NA19317_ch_G0000245;Name=CSPG4P1Y
NA19317_chrY	CAT	transcript	25546626	25550423	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000679;gene_id=NA19317_ch_G0000245;Parent=NA19317_ch_G0000245;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=NA19317_ch_T0000679;Name=CSPG4P1Y
NA19317_chrY	CAT	exon	25546626	25546697	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000679;gene_id=NA19317_ch_G0000245;Parent=NA19317_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19317_ch_T0000679:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25546698	25549700	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000679;gene_id=NA19317_ch_G0000245;Parent=NA19317_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:NA19317_ch_T0000679:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25549701	25550423	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000679;gene_id=NA19317_ch_G0000245;Parent=NA19317_ch_T0000679;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19317_ch_T0000679:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25569616	25571146	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=NA19317_ch_G0000246;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=NA19317_ch_G0000246;Name=LOC102724034
NA19317_chrY	CAT	transcript	25569616	25571146	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_G0000246;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=NA19317_ch_T0000680;Name=LOC102724034
NA19317_chrY	CAT	exon	25569616	25569641	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_T0000680;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000680:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25569642	25570329	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_T0000680;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:NA19317_ch_T0000680:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25570330	25570454	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_T0000680;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000680:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25570455	25570722	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_T0000680;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:NA19317_ch_T0000680:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25570723	25571146	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=NA19317_ch_T0000680;gene_id=NA19317_ch_G0000246;Parent=NA19317_ch_T0000680;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000680:2;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25573145	25578009	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=NA19317_ch_G0000247;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=NA19317_ch_G0000247;Name=GOLGA2P3Y
NA19317_chrY	CAT	transcript	25573145	25578009	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_G0000247;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=NA19317_ch_T0000681;Name=GOLGA2P3Y
NA19317_chrY	CAT	exon	25573145	25573228	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25573229	25573310	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25573311	25573403	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25573404	25573492	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25573493	25573681	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25573682	25573936	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25573937	25574025	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25574026	25574445	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25574446	25574520	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25574521	25575876	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25575877	25575934	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25575935	25576230	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25576231	25576582	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25576583	25577701	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25577702	25577780	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25577781	25577966	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:NA19317_ch_T0000681:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25577967	25578009	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=NA19317_ch_T0000681;gene_id=NA19317_ch_G0000247;Parent=NA19317_ch_T0000681;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:NA19317_ch_T0000681:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25673877	25684865	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=NA19317_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=NA19317_ch_G0000248;Name=LOC107987240
NA19317_chrY	CAT	transcript	25673877	25684865	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_G0000248;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=NA19317_ch_T0000682;Name=LOC107987240
NA19317_chrY	CAT	exon	25673877	25674534	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_T0000682;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000682:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25674535	25674743	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_T0000682;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:NA19317_ch_T0000682:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25674744	25674850	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_T0000682;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000682:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25674851	25684633	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_T0000682;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:NA19317_ch_T0000682:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25684634	25684865	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=NA19317_ch_T0000682;gene_id=NA19317_ch_G0000248;Parent=NA19317_ch_T0000682;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000682:2;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25692746	25694379	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=NA19317_ch_G0000249;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=NA19317_ch_G0000249;Name=LOC101928626
NA19317_chrY	CAT	transcript	25692746	25694379	1000	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_G0000249;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=NA19317_ch_T0000683;Name=LOC101928626
NA19317_chrY	CAT	exon	25692746	25692836	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_T0000683;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000683:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25692837	25693531	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_T0000683;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:NA19317_ch_T0000683:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25693532	25693798	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_T0000683;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000683:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25693799	25693935	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_T0000683;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:NA19317_ch_T0000683:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25693936	25694379	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=NA19317_ch_T0000683;gene_id=NA19317_ch_G0000249;Parent=NA19317_ch_T0000683;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000683:2;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25783146	25796251	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.1;gene_id=NA19317_ch_G0000250;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=NA19317_ch_G0000250;Name=LOC107987350
NA19317_chrY	CAT	transcript	25783146	25796251	1000	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_G0000250;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=NA19317_ch_T0000684;Name=LOC107987350
NA19317_chrY	CAT	exon	25783146	25783601	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000684;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000684:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25783602	25789571	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000684;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000684:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25789572	25791736	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000684;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000684:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25791737	25792377	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000684;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000684:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25792378	25796251	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=NA19317_ch_T0000684;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000684;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000684:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	25783146	25796251	1000	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_G0000250;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=NA19317_ch_T0000685;Name=LOC107987350
NA19317_chrY	CAT	exon	25783146	25783601	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000685;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000685:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25783602	25789103	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000685;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000685:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25789104	25791736	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000685;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000685:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25791737	25792377	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000685;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000685:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25792378	25796251	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=NA19317_ch_T0000685;gene_id=NA19317_ch_G0000250;Parent=NA19317_ch_T0000685;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000685:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25848520	25849650	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=NA19317_ch_G0000251;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=NA19317_ch_G0000251;Name=TTTY17A
NA19317_chrY	CAT	transcript	25848520	25849650	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=NA19317_ch_T0000686;gene_id=NA19317_ch_G0000251;Parent=NA19317_ch_G0000251;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=NA19317_ch_T0000686;Name=TTTY17A
NA19317_chrY	CAT	exon	25848520	25848579	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=NA19317_ch_T0000686;gene_id=NA19317_ch_G0000251;Parent=NA19317_ch_T0000686;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:NA19317_ch_T0000686:0;Name=TTTY17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25848580	25849544	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=NA19317_ch_T0000686;gene_id=NA19317_ch_G0000251;Parent=NA19317_ch_T0000686;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:NA19317_ch_T0000686:0;Name=TTTY17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25849545	25849650	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=NA19317_ch_T0000686;gene_id=NA19317_ch_G0000251;Parent=NA19317_ch_T0000686;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:NA19317_ch_T0000686:1;Name=TTTY17A;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25933400	25970223	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=NA19317_ch_G0000252;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=NA19317_ch_G0000252;Name=TTTY4B
NA19317_chrY	CAT	transcript	25933400	25970223	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_G0000252;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=NA19317_ch_T0000687;Name=TTTY4B
NA19317_chrY	CAT	exon	25933400	25933560	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19317_ch_T0000687:0;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25933561	25960584	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19317_ch_T0000687:0;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25960585	25960660	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19317_ch_T0000687:1;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25960661	25962464	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19317_ch_T0000687:1;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25962465	25962572	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19317_ch_T0000687:2;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25962573	25969222	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:NA19317_ch_T0000687:2;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25969223	25970223	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=NA19317_ch_T0000687;gene_id=NA19317_ch_G0000252;Parent=NA19317_ch_T0000687;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:NA19317_ch_T0000687:3;Name=TTTY4B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	25981202	26002404	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=NA19317_ch_G0000253;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=NA19317_ch_G0000253;Name=BPY2
NA19317_chrY	CAT	transcript	25981202	26002404	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_G0000253;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=NA19317_ch_T0000688;Name=BPY2
NA19317_chrY	CAT	exon	25981202	25981232	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:0;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25981233	25981507	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:0;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25981508	25981630	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:1;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25981631	25984695	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:1;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25984696	25984832	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:2;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25984833	25989241	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:2;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25989242	25989360	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:3;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25989283	25989360	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19317_ch_T0000688:0;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	25989283	25989285	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:NA19317_ch_T0000688;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25989361	25991419	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:3;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25991420	25991537	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:4;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25991420	25991537	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19317_ch_T0000688:1;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25991538	25994390	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:4;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25994391	25994496	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:5;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25994391	25994496	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19317_ch_T0000688:2;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25994497	25995188	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:5;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	25995189	25995313	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:6;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	25995189	25995207	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:NA19317_ch_T0000688:3;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	25995205	25995207	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:NA19317_ch_T0000688;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	25995314	26001863	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:6;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26001864	26001988	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:7;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26001989	26002082	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:NA19317_ch_T0000688:7;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26002083	26002404	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=NA19317_ch_T0000688;gene_id=NA19317_ch_G0000253;Parent=NA19317_ch_T0000688;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:NA19317_ch_T0000688:8;Name=BPY2;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26103185	26106526	.	-	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=NA19317_ch_G0000254;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=NA19317_ch_G0000254;Name=LOC105377241
NA19317_chrY	CAT	transcript	26103185	26106526	1000	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_G0000254;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=NA19317_ch_T0000689;Name=LOC105377241
NA19317_chrY	CAT	exon	26103185	26103285	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000689;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000689:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26103286	26105643	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000689;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19317_ch_T0000689:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26105644	26105681	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000689;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000689:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26105682	26106343	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000689;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19317_ch_T0000689:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26106344	26106526	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000689;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000689;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000689:2;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26103185	26106526	1000	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_G0000254;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=NA19317_ch_T0000690;Name=LOC105377241
NA19317_chrY	CAT	exon	26103185	26103285	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000690;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000690:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26103286	26105616	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000690;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19317_ch_T0000690:0;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26105617	26105681	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000690;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000690:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26105682	26106343	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000690;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:NA19317_ch_T0000690:1;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26106344	26106526	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=NA19317_ch_T0000690;gene_id=NA19317_ch_G0000254;Parent=NA19317_ch_T0000690;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:NA19317_ch_T0000690:2;Name=LOC105377241;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26126131	26169316	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=NA19317_ch_G0000255;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=NA19317_ch_G0000255;Name=DAZ3
NA19317_chrY	CAT	transcript	26126131	26169316	100	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_G0000255;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=NA19317_ch_T0000691;Name=DAZ3
NA19317_chrY	CAT	exon	26126131	26127987	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26127988	26131959	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26131960	26132058	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26131995	26132058	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:0;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26131995	26131997	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:NA19317_ch_T0000691;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26132059	26136630	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26136631	26136665	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26136631	26136665	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:1;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26136666	26137410	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26137411	26137482	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26137411	26137482	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:2;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26137483	26147197	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26147198	26147269	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26147198	26147269	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:3;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26147270	26149573	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26149574	26149645	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26149574	26149645	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:4;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26149646	26151950	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26151951	26152022	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26151951	26152022	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:5;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26152023	26154346	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26154347	26154418	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26154347	26154418	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:6;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26154419	26156736	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26156737	26156808	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26156737	26156808	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:7;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26156809	26159179	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26159180	26159251	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26159180	26159251	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:8;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26159252	26169105	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:NA19317_ch_T0000691:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26169106	26169316	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:NA19317_ch_T0000691:10;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26169106	26169108	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:NA19317_ch_T0000691:9;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26169106	26169108	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=NA19317_ch_T0000691;gene_id=NA19317_ch_G0000255;Parent=NA19317_ch_T0000691;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:NA19317_ch_T0000691;Name=DAZ3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26189743	26253425	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=NA19317_ch_G0000256;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=NA19317_ch_G0000256;Name=DAZ4
NA19317_chrY	CAT	transcript	26189743	26253425	100	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000692;Name=DAZ4
NA19317_chrY	CAT	exon	26189743	26190052	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000692;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26190053	26210756	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26210757	26210828	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26210757	26210828	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26210829	26213199	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26213200	26213271	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26213200	26213271	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26213272	26215588	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26215589	26215660	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26215589	26215660	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26215661	26217984	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26217985	26218056	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26217985	26218056	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26218057	26242072	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242073	26242144	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242073	26242144	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242145	26242889	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242890	26242924	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242890	26242924	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242925	26247496	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26247497	26247595	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26247497	26247560	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26247558	26247560	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000692;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26247596	26251568	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000692:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26251569	26253425	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000692;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000692;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000692:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26189743	26253425	100	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000693;Name=DAZ4
NA19317_chrY	CAT	exon	26189743	26190052	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000693;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26190053	26207502	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26207503	26207649	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26207503	26207649	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26207650	26207923	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26207924	26208015	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26207924	26208015	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26208016	26208575	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26208576	26208627	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26208576	26208627	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26208628	26209063	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26209064	26209127	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26209064	26209127	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26209128	26209216	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26209217	26209356	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26209217	26209356	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26209357	26210756	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26210757	26210828	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26210757	26210828	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26210829	26213199	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26213200	26213271	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26213200	26213271	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26213272	26215588	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26215589	26215660	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26215589	26215660	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26215661	26217984	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26217985	26218056	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26217985	26218056	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26218057	26232535	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26232536	26232607	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26232536	26232607	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26232608	26242072	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242073	26242144	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242073	26242144	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242145	26242889	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242890	26242924	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242890	26242924	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242925	26247496	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26247497	26247595	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26247497	26247560	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26247558	26247560	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000693;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26247596	26251568	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000693:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26251569	26253425	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000693;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000693;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000693:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26189842	26253425	100	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_G0000256;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=NA19317_ch_T0000694;Name=DAZ4
NA19317_chrY	CAT	exon	26189842	26190052	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26190050	26190052	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:NA19317_ch_T0000694;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26190053	26207502	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:0;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26207503	26207649	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26207503	26207649	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26207650	26207923	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:1;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26207924	26208015	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26207924	26208015	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26208016	26208575	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:2;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26208576	26208627	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26208576	26208627	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26208628	26209063	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:3;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26209064	26209127	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26209064	26209127	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26209128	26209216	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:4;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26209217	26209356	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26209217	26209356	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26209357	26210756	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:5;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26210757	26210828	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26210757	26210828	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26210829	26213199	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:6;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26213200	26213271	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26213200	26213271	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26213272	26215588	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:7;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26215589	26215660	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26215589	26215660	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26215661	26217984	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:8;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26217985	26218056	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26217985	26218056	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26218057	26232535	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:9;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26232536	26232607	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26232536	26232607	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26232608	26234920	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:10;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26234921	26234992	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26234921	26234992	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26234993	26237304	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:11;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26237305	26237376	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26237305	26237376	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26237377	26239688	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:12;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26239689	26239760	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26239689	26239760	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26239761	26242072	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:13;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242073	26242144	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242073	26242144	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242145	26242889	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:14;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26242890	26242924	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26242890	26242924	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26242925	26247496	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:15;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26247497	26247595	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26247497	26247560	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:NA19317_ch_T0000694:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26247558	26247560	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:NA19317_ch_T0000694;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26247596	26251568	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:NA19317_ch_T0000694:16;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26251569	26253425	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=NA19317_ch_T0000694;gene_id=NA19317_ch_G0000256;Parent=NA19317_ch_T0000694;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:NA19317_ch_T0000694:17;Name=DAZ4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26273034	26276375	.	+	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=NA19317_ch_G0000257;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=NA19317_ch_G0000257;Name=LOC105377238
NA19317_chrY	CAT	transcript	26273034	26276375	1000	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_G0000257;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=NA19317_ch_T0000695;Name=LOC105377238
NA19317_chrY	CAT	exon	26273034	26273216	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000695;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000695:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26273217	26273878	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000695;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19317_ch_T0000695:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26273879	26273943	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000695;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000695:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26273944	26276274	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000695;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19317_ch_T0000695:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26276275	26276375	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000695;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000695;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000695:2;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26273034	26276375	1000	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_G0000257;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=NA19317_ch_T0000696;Name=LOC105377238
NA19317_chrY	CAT	exon	26273034	26273216	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000696;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000696:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26273217	26273878	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000696;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19317_ch_T0000696:0;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26273879	26273916	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000696;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000696:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26273917	26276274	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000696;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:NA19317_ch_T0000696:1;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26276275	26276375	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=NA19317_ch_T0000696;gene_id=NA19317_ch_G0000257;Parent=NA19317_ch_T0000696;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:NA19317_ch_T0000696:2;Name=LOC105377238;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26377244	26398446	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;gene_id=NA19317_ch_G0000258;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=NA19317_ch_G0000258;Name=BPY2C
NA19317_chrY	CAT	transcript	26377244	26398446	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_G0000258;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=NA19317_ch_T0000697;Name=BPY2C
NA19317_chrY	CAT	exon	26377244	26377565	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:0;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26377566	26377659	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:0;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26377660	26377784	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:1;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26377785	26384334	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:1;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26384335	26384459	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:2;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26384441	26384459	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19317_ch_T0000697:0;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26384441	26384443	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:NA19317_ch_T0000697;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26384460	26385151	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:2;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26385152	26385257	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:3;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26385152	26385257	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19317_ch_T0000697:1;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26385258	26388110	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:3;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26388111	26388228	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:4;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26388111	26388228	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19317_ch_T0000697:2;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26388229	26390287	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:4;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26390288	26390406	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:5;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26390288	26390365	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:NA19317_ch_T0000697:3;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26390363	26390365	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:NA19317_ch_T0000697;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26390407	26394815	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:5;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26394816	26394952	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:6;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26394953	26398017	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:6;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26398018	26398140	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:7;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26398141	26398415	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:NA19317_ch_T0000697:7;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26398416	26398446	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=NA19317_ch_T0000697;gene_id=NA19317_ch_G0000258;Parent=NA19317_ch_T0000697;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:NA19317_ch_T0000697:8;Name=BPY2C;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26409425	26446243	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=NA19317_ch_G0000259;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=NA19317_ch_G0000259;Name=TTTY4
NA19317_chrY	CAT	transcript	26409425	26446243	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_G0000259;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=NA19317_ch_T0000698;Name=TTTY4
NA19317_chrY	CAT	exon	26409425	26410425	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19317_ch_T0000698:0;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26410426	26417093	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19317_ch_T0000698:0;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26417094	26417201	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19317_ch_T0000698:1;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26417202	26419005	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19317_ch_T0000698:1;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26419006	26419081	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19317_ch_T0000698:2;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26419082	26446082	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:NA19317_ch_T0000698:2;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26446083	26446243	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=NA19317_ch_T0000698;gene_id=NA19317_ch_G0000259;Parent=NA19317_ch_T0000698;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:NA19317_ch_T0000698:3;Name=TTTY4;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26529984	26531115	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_611.1;gene_id=NA19317_ch_G0000260;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=NA19317_ch_G0000260;Name=TTTY17B
NA19317_chrY	CAT	transcript	26529984	26531115	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=NA19317_ch_T0000699;gene_id=NA19317_ch_G0000260;Parent=NA19317_ch_G0000260;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=NA19317_ch_T0000699;Name=TTTY17B
NA19317_chrY	CAT	exon	26529984	26530089	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=NA19317_ch_T0000699;gene_id=NA19317_ch_G0000260;Parent=NA19317_ch_T0000699;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:NA19317_ch_T0000699:0;Name=TTTY17B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26530090	26531055	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=NA19317_ch_T0000699;gene_id=NA19317_ch_G0000260;Parent=NA19317_ch_T0000699;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:NA19317_ch_T0000699:0;Name=TTTY17B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26531056	26531115	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_611.1;transcript_id=NA19317_ch_T0000699;gene_id=NA19317_ch_G0000260;Parent=NA19317_ch_T0000699;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:NA19317_ch_T0000699:1;Name=TTTY17B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26583384	26596489	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.1;gene_id=NA19317_ch_G0000261;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=NA19317_ch_G0000261;Name=LOC107987350
NA19317_chrY	CAT	transcript	26583384	26596489	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_G0000261;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=NA19317_ch_T0000700;Name=LOC107987350
NA19317_chrY	CAT	exon	26583384	26587257	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000700;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000700:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26587258	26587898	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000700;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000700:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26587899	26590063	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000700;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000700:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26590064	26596033	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000700;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000700:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26596034	26596489	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=NA19317_ch_T0000700;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000700;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000700:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26583384	26596489	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_G0000261;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=NA19317_ch_T0000701;Name=LOC107987350
NA19317_chrY	CAT	exon	26583384	26587257	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000701;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000701:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26587258	26587898	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000701;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000701:0;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26587899	26590531	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000701;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000701:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26590532	26596033	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000701;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:NA19317_ch_T0000701:1;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26596034	26596489	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=NA19317_ch_T0000701;gene_id=NA19317_ch_G0000261;Parent=NA19317_ch_T0000701;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:NA19317_ch_T0000701:2;Name=LOC107987350;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26685275	26686908	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=NA19317_ch_G0000262;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=NA19317_ch_G0000262;Name=LOC101928626
NA19317_chrY	CAT	transcript	26685275	26686908	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_G0000262;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=NA19317_ch_T0000702;Name=LOC101928626
NA19317_chrY	CAT	exon	26685275	26685718	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_T0000702;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000702:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26685719	26685855	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_T0000702;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:NA19317_ch_T0000702:0;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26685856	26686122	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_T0000702;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000702:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26686123	26686817	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_T0000702;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:NA19317_ch_T0000702:1;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26686818	26686908	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=NA19317_ch_T0000702;gene_id=NA19317_ch_G0000262;Parent=NA19317_ch_T0000702;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:NA19317_ch_T0000702:2;Name=LOC101928626;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26694789	26705792	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=NA19317_ch_G0000263;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=NA19317_ch_G0000263;Name=LOC107987240
NA19317_chrY	CAT	transcript	26694789	26705792	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_G0000263;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=NA19317_ch_T0000703;Name=LOC107987240
NA19317_chrY	CAT	exon	26694789	26695020	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_T0000703;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000703:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26695021	26704818	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_T0000703;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:NA19317_ch_T0000703:0;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26704819	26704925	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_T0000703;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000703:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26704926	26705134	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_T0000703;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:NA19317_ch_T0000703:1;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26705135	26705792	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=NA19317_ch_T0000703;gene_id=NA19317_ch_G0000263;Parent=NA19317_ch_T0000703;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:NA19317_ch_T0000703:2;Name=LOC107987240;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26724653	26741071	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;alternative_source_transcripts=hg002_chrY_paternal_617.1;gene_id=NA19317_ch_G0000264;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=NA19317_ch_G0000264;Name=SEPTIN14P23
NA19317_chrY	CAT	transcript	26724653	26741071	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_G0000264;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=NA19317_ch_T0000704;Name=SEPTIN14P23
NA19317_chrY	CAT	exon	26724653	26725231	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_T0000704;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19317_ch_T0000704:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26725232	26733268	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_T0000704;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19317_ch_T0000704:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26733269	26733437	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_T0000704;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19317_ch_T0000704:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26733438	26740977	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_T0000704;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:NA19317_ch_T0000704:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26740978	26741071	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=NA19317_ch_T0000704;gene_id=NA19317_ch_G0000264;Parent=NA19317_ch_T0000704;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:NA19317_ch_T0000704:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26801668	26806533	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=NA19317_ch_G0000265;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=NA19317_ch_G0000265;Name=GOLGA2P2Y
NA19317_chrY	CAT	transcript	26801668	26806533	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_G0000265;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=NA19317_ch_T0000705;Name=GOLGA2P2Y
NA19317_chrY	CAT	exon	26801668	26801710	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26801711	26801896	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26801897	26801975	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26801976	26803095	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26803096	26803447	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26803448	26803743	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26803744	26803801	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26803802	26805157	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26805158	26805232	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26805233	26805652	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26805653	26805741	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26805742	26805996	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26805997	26806185	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26806186	26806274	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26806275	26806367	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26806368	26806449	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:NA19317_ch_T0000705:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26806450	26806533	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=NA19317_ch_T0000705;gene_id=NA19317_ch_G0000265;Parent=NA19317_ch_T0000705;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:NA19317_ch_T0000705:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26808532	26810062	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=NA19317_ch_G0000266;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=NA19317_ch_G0000266;Name=LOC102724034
NA19317_chrY	CAT	transcript	26808532	26810062	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_G0000266;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=NA19317_ch_T0000706;Name=LOC102724034
NA19317_chrY	CAT	exon	26808532	26808955	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_T0000706;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000706:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26808956	26809223	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_T0000706;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:NA19317_ch_T0000706:0;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26809224	26809348	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_T0000706;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000706:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26809349	26810036	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_T0000706;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:NA19317_ch_T0000706:1;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26810037	26810062	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=NA19317_ch_T0000706;gene_id=NA19317_ch_G0000266;Parent=NA19317_ch_T0000706;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:NA19317_ch_T0000706:2;Name=LOC102724034;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26829247	26833044	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=NA19317_ch_G0000267;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=NA19317_ch_G0000267;Name=CSPG4P1Y
NA19317_chrY	CAT	transcript	26829247	26833044	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000707;gene_id=NA19317_ch_G0000267;Parent=NA19317_ch_G0000267;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=NA19317_ch_T0000707;Name=CSPG4P1Y
NA19317_chrY	CAT	exon	26829247	26829969	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000707;gene_id=NA19317_ch_G0000267;Parent=NA19317_ch_T0000707;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19317_ch_T0000707:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26829970	26832972	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000707;gene_id=NA19317_ch_G0000267;Parent=NA19317_ch_T0000707;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:NA19317_ch_T0000707:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26832973	26833044	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=NA19317_ch_T0000707;gene_id=NA19317_ch_G0000267;Parent=NA19317_ch_T0000707;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:NA19317_ch_T0000707:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	26968463	26971862	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=NA19317_ch_G0000268;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=NA19317_ch_G0000268;Name=CDY1B
NA19317_chrY	CAT	transcript	26968463	26970689	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000708;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19317_ch_T0000708;Name=CDY1B
NA19317_chrY	CAT	exon	26968463	26970689	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000708;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19317_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26968794	26970416	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000708;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19317_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26968794	26968796	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000708;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19317_ch_T0000708;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26970414	26970416	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000708;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000708;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19317_ch_T0000708;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26968468	26971253	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19317_ch_T0000709;Name=CDY1B
NA19317_chrY	CAT	exon	26968468	26970385	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19317_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26968794	26970385	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19317_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26968794	26968796	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19317_ch_T0000709;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26970386	26970805	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:NA19317_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26970806	26971253	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19317_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26970806	26970878	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19317_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26970876	26970878	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=NA19317_ch_T0000709;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19317_ch_T0000709;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26968468	26971862	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_G0000268;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=NA19317_ch_T0000710;Name=CDY1B
NA19317_chrY	CAT	exon	26968468	26970385	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000710;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19317_ch_T0000710:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26970386	26970805	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000710;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:NA19317_ch_T0000710:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26970806	26971005	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000710;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19317_ch_T0000710:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26971006	26971780	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000710;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:NA19317_ch_T0000710:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26971781	26971862	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=NA19317_ch_T0000710;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000710;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:NA19317_ch_T0000710:2;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	26968476	26971253	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_G0000268;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=NA19317_ch_T0000711;Name=CDY1B
NA19317_chrY	CAT	exon	26968476	26970185	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19317_ch_T0000711:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26968794	26970185	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19317_ch_T0000711:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	26968794	26968796	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:NA19317_ch_T0000711;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	26970186	26970805	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:NA19317_ch_T0000711:0;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	26970806	26971253	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:NA19317_ch_T0000711:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	26970806	26970826	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:NA19317_ch_T0000711:1;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	26970824	26970826	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=NA19317_ch_T0000711;gene_id=NA19317_ch_G0000268;Parent=NA19317_ch_T0000711;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:NA19317_ch_T0000711;Name=CDY1B;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27074798	27079693	.	+	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=NA19317_ch_G0000269;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=NA19317_ch_G0000269;Name=TTTY3
NA19317_chrY	CAT	transcript	27074798	27079693	1000	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_G0000269;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=NA19317_ch_T0000712;Name=TTTY3
NA19317_chrY	CAT	exon	27074798	27074901	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_T0000712;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19317_ch_T0000712:0;Name=TTTY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27074902	27077099	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_T0000712;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:NA19317_ch_T0000712:0;Name=TTTY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27077100	27077234	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_T0000712;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19317_ch_T0000712:1;Name=TTTY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27077235	27079588	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_T0000712;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:NA19317_ch_T0000712:1;Name=TTTY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27079589	27079693	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=NA19317_ch_T0000712;gene_id=NA19317_ch_G0000269;Parent=NA19317_ch_T0000712;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:NA19317_ch_T0000712:2;Name=TTTY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27375602	27378726	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=NA19317_ch_G0000270;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=NA19317_ch_G0000270;Name=LOC107987352
NA19317_chrY	CAT	transcript	27375602	27378726	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_G0000270;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=NA19317_ch_T0000713;Name=LOC107987352
NA19317_chrY	CAT	exon	27375602	27376930	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_T0000713;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19317_ch_T0000713:0;Name=LOC107987352;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27376931	27378465	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_T0000713;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:NA19317_ch_T0000713:0;Name=LOC107987352;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27378466	27378526	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_T0000713;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19317_ch_T0000713:1;Name=LOC107987352;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27378527	27378643	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_T0000713;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:NA19317_ch_T0000713:1;Name=LOC107987352;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27378644	27378726	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=NA19317_ch_T0000713;gene_id=NA19317_ch_G0000270;Parent=NA19317_ch_T0000713;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:NA19317_ch_T0000713:2;Name=LOC107987352;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27540181	27581681	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=NA19317_ch_G0000271;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=NA19317_ch_G0000271;Name=REREP2Y
NA19317_chrY	CAT	transcript	27540181	27581681	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_G0000271;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=NA19317_ch_T0000714;Name=REREP2Y
NA19317_chrY	CAT	exon	27540181	27544771	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_T0000714;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19317_ch_T0000714:0;Name=REREP2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27544772	27554385	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_T0000714;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:NA19317_ch_T0000714:0;Name=REREP2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27554386	27554458	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_T0000714;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19317_ch_T0000714:1;Name=REREP2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27554459	27581278	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_T0000714;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:NA19317_ch_T0000714:1;Name=REREP2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27581279	27581681	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=NA19317_ch_T0000714;gene_id=NA19317_ch_G0000271;Parent=NA19317_ch_T0000714;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:NA19317_ch_T0000714:2;Name=REREP2Y;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27593688	27593825	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=NA19317_ch_G0000272;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=NA19317_ch_G0000272;Name=LOC124900507
NA19317_chrY	CAT	transcript	27593688	27593825	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=NA19317_ch_T0000715;gene_id=NA19317_ch_G0000272;Parent=NA19317_ch_G0000272;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=NA19317_ch_T0000715;Name=LOC124900507
NA19317_chrY	CAT	exon	27593688	27593825	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=NA19317_ch_T0000715;gene_id=NA19317_ch_G0000272;Parent=NA19317_ch_T0000715;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:NA19317_ch_T0000715:0;Name=LOC124900507;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27747456	27755450	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=NA19317_ch_G0000273;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=NA19317_ch_G0000273;Name=LOC105377244
NA19317_chrY	CAT	transcript	27747456	27755450	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_G0000273;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=NA19317_ch_T0000716;Name=LOC105377244
NA19317_chrY	CAT	exon	27747456	27752058	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_T0000716;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19317_ch_T0000716:0;Name=LOC105377244;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27752059	27752924	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_T0000716;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:NA19317_ch_T0000716:0;Name=LOC105377244;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27752925	27753091	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_T0000716;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19317_ch_T0000716:1;Name=LOC105377244;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27753092	27755219	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_T0000716;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:NA19317_ch_T0000716:1;Name=LOC105377244;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27755220	27755450	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=NA19317_ch_T0000716;gene_id=NA19317_ch_G0000273;Parent=NA19317_ch_T0000716;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:NA19317_ch_T0000716:2;Name=LOC105377244;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	27770961	27787134	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=NA19317_ch_G0000274;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=NA19317_ch_G0000274;Name=LOC102723869
NA19317_chrY	CAT	transcript	27770961	27787134	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_G0000274;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=NA19317_ch_T0000717;Name=LOC102723869
NA19317_chrY	CAT	exon	27770961	27771228	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19317_ch_T0000717:0;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27771229	27783264	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19317_ch_T0000717:0;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27783265	27783293	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19317_ch_T0000717:1;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27783294	27783387	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19317_ch_T0000717:1;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27783388	27783460	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19317_ch_T0000717:2;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	27783461	27787103	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:NA19317_ch_T0000717:2;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	27787104	27787134	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=NA19317_ch_T0000717;gene_id=NA19317_ch_G0000274;Parent=NA19317_ch_T0000717;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:NA19317_ch_T0000717:3;Name=LOC102723869;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	56043446	56058162	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=NA19317_ch_G0000275;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000275;Name=SPRY3
NA19317_chrY	CAT	transcript	56043446	56058162	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_G0000275;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=NA19317_ch_T0000718;Name=SPRY3
NA19317_chrY	CAT	exon	56043446	56043786	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:NA19317_ch_T0000718:0;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56043787	56049424	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:NA19317_ch_T0000718:0;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56049425	56058162	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:NA19317_ch_T0000718:1;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56049531	56050397	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:NA19317_ch_T0000718:0;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56049531	56049533	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:NA19317_ch_T0000718;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56050395	56050397	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000718;gene_id=NA19317_ch_G0000275;Parent=NA19317_ch_T0000718;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:NA19317_ch_T0000718;Name=SPRY3;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	56159789	56222224	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=NA19317_ch_G0000276;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000276;Name=VAMP7
NA19317_chrY	CAT	transcript	56159789	56222224	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19317_ch_T0000719;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56167992	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56167912	56167992	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56167912	56167914	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19317_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56167993	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56176561	56176698	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56178948	56179038	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56198271	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56198272	56198339	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56198272	56198339	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56198340	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56218157	56218249	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000719:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56220338	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56220404	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000719;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19317_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19317_ch_T0000720;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56168057	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56167912	56168057	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56167912	56167914	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19317_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56168058	56174071	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56174072	56174129	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56174072	56174129	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56174130	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56176561	56176698	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56178948	56179038	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56218157	56218249	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000720:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56220338	56220594	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56220592	56220594	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000720;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19317_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19317_ch_T0000721;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56168057	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56167912	56168057	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56167912	56167914	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19317_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56168058	56174071	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56174072	56174129	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56174072	56174129	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56174130	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56176561	56176698	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56178948	56179038	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56198271	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56198272	56198339	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56198272	56198339	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56198340	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56218157	56218249	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000721:7;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56220338	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56220404	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000721;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19317_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19317_ch_T0000722;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56168078	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56168074	56168078	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56168074	56168076	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19317_ch_T0000722;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56168079	56174071	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56174072	56174129	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56174072	56174129	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56174130	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56176561	56176698	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56178948	56179038	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56218157	56218249	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000722:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56220338	56220594	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56220592	56220594	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000722;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000722;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19317_ch_T0000722;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=NA19317_ch_T0000723;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56168078	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56168074	56168078	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56168074	56168076	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:NA19317_ch_T0000723;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56168079	56174071	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56174072	56174129	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56174072	56174129	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56174130	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56176561	56176698	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56178948	56179038	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56198271	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56198272	56198339	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56198272	56198339	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56198340	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56218157	56218249	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:NA19317_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:NA19317_ch_T0000723:7;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56220338	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:NA19317_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56220404	56220406	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000723;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000723;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:NA19317_ch_T0000723;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=NA19317_ch_T0000724;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56168057	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56168058	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56198271	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56198272	56198339	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56198340	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000724:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000724;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000724;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000724:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56159789	56222224	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_G0000276;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=NA19317_ch_T0000725;Name=VAMP7
NA19317_chrY	CAT	exon	56159789	56159892	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56159893	56167902	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:0;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56167903	56167992	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56167993	56174071	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:1;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56174072	56174129	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56174130	56176560	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:2;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56176561	56176698	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56176699	56178947	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:3;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56178948	56179038	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56179039	56198271	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:4;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56198272	56198339	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56198340	56218156	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:5;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56218157	56218249	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56218250	56220337	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:NA19317_ch_T0000725:6;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56220338	56222224	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000725;gene_id=NA19317_ch_G0000276;Parent=NA19317_ch_T0000725;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:NA19317_ch_T0000725:7;Name=VAMP7;rna_support=False;reference_support=False
NA19317_chrY	CAT	gene	56276347	56289610	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=NA19317_ch_G0000277;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=NA19317_ch_G0000277;Name=IL9R
NA19317_chrY	CAT	transcript	56276347	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000726;Name=IL9R
NA19317_chrY	CAT	exon	56276347	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281708	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281709	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281709	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284083	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284084	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284084	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000726:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000726:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56288642	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000726:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56288640	56288642	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000726;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000726;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000726;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276404	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000727;Name=IL9R
NA19317_chrY	CAT	exon	56276404	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56286701	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286702	56286934	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286702	56286934	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286935	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000727:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000727:10;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56288642	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000727:10;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56288640	56288642	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000727;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000727;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000727;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276404	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000728;Name=IL9R
NA19317_chrY	CAT	exon	56276404	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000728:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56288642	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000728:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56288640	56288642	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000728;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000728;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000728;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276404	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000729;Name=IL9R
NA19317_chrY	CAT	exon	56276404	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284083	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284084	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284084	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56286701	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286702	56286934	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286702	56286934	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286935	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000729:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000729:10;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56288642	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000729:10;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56288640	56288642	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000729;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000729;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000729;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276404	56290142	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000730;Name=IL9R
NA19317_chrY	CAT	exon	56276404	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000730;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281708	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281709	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281709	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56286701	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000730:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286702	56290142	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000730:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286702	56286938	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000730:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56286936	56286938	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000730;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000730;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000730;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276410	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000731;Name=IL9R
NA19317_chrY	CAT	exon	56276410	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000731;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284083	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284084	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284084	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000731:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000731:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000731:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000731;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000731;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000731;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276412	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000732;Name=IL9R
NA19317_chrY	CAT	exon	56276412	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000732;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000732:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000732:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000732:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000732;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000732;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000732;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276412	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000733;Name=IL9R
NA19317_chrY	CAT	exon	56276412	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000733;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281708	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281709	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281709	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000733:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000733:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000733:9;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000733;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000733;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000733;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276414	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000734;Name=IL9R
NA19317_chrY	CAT	exon	56276414	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280129	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280130	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281672	56281822	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56281672	56281674	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000734;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000734:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000734:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000734:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000734;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000734;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000734;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276417	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000735;Name=IL9R
NA19317_chrY	CAT	exon	56276417	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276555	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276555	56276557	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000735;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000735:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000735:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000735:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000735:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000735:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000735:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000735:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000735;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000735;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000735;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276491	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000736;Name=IL9R
NA19317_chrY	CAT	exon	56276491	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276555	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276555	56276557	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000736;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56281708	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281709	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281709	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282479	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282480	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282480	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283222	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283223	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283223	56283368	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000736:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000736:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000736:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000736;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000736;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000736;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56276491	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000737;Name=IL9R
NA19317_chrY	CAT	exon	56276491	56276582	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56276539	56276582	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56276539	56276541	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000737;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56276583	56280207	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56280208	56280308	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56280208	56280308	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56280309	56281684	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56281685	56281822	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56281685	56281822	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56281823	56282251	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282252	56282363	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282252	56282363	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282364	56282486	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:3;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56282487	56282658	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56282487	56282658	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56282659	56283251	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:4;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56283252	56283368	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56283252	56283368	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56283369	56284080	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:5;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284081	56284282	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284081	56284282	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284283	56284885	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:6;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56284886	56284991	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284886	56284991	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284992	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000737:7;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000737:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56288642	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000737:8;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56288640	56288642	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000737;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000737;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000737;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	transcript	56284608	56289610	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_G0000277;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=NA19317_ch_T0000738;Name=IL9R
NA19317_chrY	CAT	exon	56284608	56284820	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000738:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56284636	56284820	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000738:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	start_codon	56284636	56284638	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:NA19317_ch_T0000738;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56284821	56286326	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000738:0;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56286327	56286411	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000738:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56286327	56286411	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000738:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	intron	56286412	56288605	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:NA19317_ch_T0000738:1;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	exon	56288606	56289610	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:NA19317_ch_T0000738:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	CDS	56288606	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:NA19317_ch_T0000738:2;Name=IL9R;rna_support=False;reference_support=False
NA19317_chrY	CAT	stop_codon	56289200	56289202	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=NA19317_ch_T0000738;gene_id=NA19317_ch_G0000277;Parent=NA19317_ch_T0000738;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:NA19317_ch_T0000738;Name=IL9R;rna_support=False;reference_support=False